Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689125

Identifier: 116689125

GI number: 116689125

Start: 1213367

End: 1214797

Strand: Direct

Name: 116689125

Synonym: Bcen2424_1102

Alternate gene names: NA

Gene position: 1213367-1214797 (Clockwise)

Preceding gene: 116689124

Following gene: 116689126

Centisome position: 34.83

GC content: 66.39

Gene sequence:

>1431_bases
ATGAAACGACATGCCGCCTGGGCGGGCATGGCGTCGGGAATCGCGCTTGGCGCCGCTCCCGCGCTCGCATCGGCCGCCAC
GCTCGACGGTGCCACGCTGTCCGCGCTCTGGGGCATCCCGTTCGCGGGAATCCTGCTGTCCATCGCGCTGTTCCCGCTCG
TCGCCCCCGTGTTCTGGCATCACCACTTCGGCAAGATCGCCGCCGGCTGGGCGATCGTGTTCCTGGCGCCGTTCGCGGTC
GCGTTCGGCGCCGGCACCGCGTTCGGCACGCTCGTGCATGCGCTGCTCGAGGAATACATTCCGTTCATCGTGCTGCTCAC
CGCGCTCTACACGGTCGCGGGCGGCATCTGCGTGAACGGCAACCTGCATGGCTCGCCGAAGCTGAATACCGCGATCCTCG
CGCTCGGCACGCTGCTCGCGAGCGTGATGGGTACGACCGGCGCCGCGATGCTGCTGATCCGGCCGCTGCTGCGCGCCAAC
GACAACCGCAAGCATGTCGTGCACGTCGTGATCTTCTTCATCTTCCTCGTCGCGAATGCGGGCGGCTCGCTGTCGCCGCT
CGGCGATCCGCCGCTGTTCCTCGGCTTCCTGAACGGCGTGAGCTTCTTCTGGACGACCACCCATCTCGCGCTGCCGATGC
TGTTCATCTGCGTGGTGCTGCTGACGCTGTTCTTCGTGCTCGATACGTACTTCTACCGGAAGGGCGGCGAGGAGCGGCCG
GCCGCGCTCGATCCGACGCCCGACGGCGCGGCGCTGTCGATCGACGGCAAGATCAACTTCGTGCTGCTGGCGGCCGTGAT
CGCGCTCGTGCTGATGAGCGGCGTGTGGAAGCCGGACATCTCGTTCGACGTGTGGGGTACGCACGTCGCGCTGCAGAATC
TCGTGCGCGACGTCGCGCTCGTGGTGGTGACGCTCGCGTCGCTCGCGCTGACGCCGCGTTCCGCGCGCGAGGGCAACGCA
TTCAACTGGGCGCCGATCGAGGAAGTCGCGAAGCTGTTCGCGGGCATTTTCGTGACGATTGCGCCGGTAATCGTGATCCT
GCGTGCGGGCGCGGACGGCGCGTTCGCGCAGATCGTGCATCTCGTCACCGGGCCCGACGGCAGGCCGATCGACGCGATGT
ACTTCTGGGCGACGGGCATCCTGTCGTCGTTCCTCGACAACGCACCGACCTATCTCGTGTTCTTCAACCTTGCGGGCGGC
GATGCGCAGACGCTGATGACGACCGGCGCATCGACGCTCGCCGCGATTTCCGCCGGCGCGGTGTTCATGGGCGCGAACAG
CTATATCGGCAACGCGCCGAATTTCATGGTGAAGGCGATCGCCGAATCGCGCGGCGTGAAGATGCCGAGCTTCTTCGCGT
ACCTCGGCTGGGCGCTCGTCGTGCTGATACCGGTATTCCTGCTGACGTCGTGGCTTTTCTTCACGGCGTAA

Upstream 100 bases:

>100_bases
CATTCTGGGCGCGCACGGCCCGTACCGCGTGCACGCGATCGTCGTACGGGGCGCCTGACGCGCCCGCTGTATTCACCCCT
ACTCGACAAGGAAGTTCCGC

Downstream 100 bases:

>100_bases
GCTGACGTTTTTCAACCCCGAGCGGGCGGCTCCGGCGGCGCATGGCGCGCCGCGATCCGTCCGCGGCATGCGGAGATGGC
GATGCAGAAGATCCTGGTCG

Product: Na+/H+ antiporter NhaD and related arsenite permeases-like protein

Products: NA

Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKRHAAWAGMASGIALGAAPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWHHHFGKIAAGWAIVFLAPFAV
AFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNGNLHGSPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRAN
DNRKHVVHVVIFFIFLVANAGGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFVLDTYFYRKGGEERP
AALDPTPDGAALSIDGKINFVLLAAVIALVLMSGVWKPDISFDVWGTHVALQNLVRDVALVVVTLASLALTPRSAREGNA
FNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVHLVTGPDGRPIDAMYFWATGILSSFLDNAPTYLVFFNLAGG
DAQTLMTTGASTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWLFFTA

Sequences:

>Translated_476_residues
MKRHAAWAGMASGIALGAAPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWHHHFGKIAAGWAIVFLAPFAV
AFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNGNLHGSPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRAN
DNRKHVVHVVIFFIFLVANAGGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFVLDTYFYRKGGEERP
AALDPTPDGAALSIDGKINFVLLAAVIALVLMSGVWKPDISFDVWGTHVALQNLVRDVALVVVTLASLALTPRSAREGNA
FNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVHLVTGPDGRPIDAMYFWATGILSSFLDNAPTYLVFFNLAGG
DAQTLMTTGASTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWLFFTA
>Mature_476_residues
MKRHAAWAGMASGIALGAAPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWHHHFGKIAAGWAIVFLAPFAV
AFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNGNLHGSPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRAN
DNRKHVVHVVIFFIFLVANAGGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFVLDTYFYRKGGEERP
AALDPTPDGAALSIDGKINFVLLAAVIALVLMSGVWKPDISFDVWGTHVALQNLVRDVALVVVTLASLALTPRSAREGNA
FNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVHLVTGPDGRPIDAMYFWATGILSSFLDNAPTYLVFFNLAGG
DAQTLMTTGASTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWLFFTA

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50174; Mature: 50174

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHAAWAGMASGIALGAAPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWH
CCCCHHHHHHHHCHHHCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
HHFGKIAAGWAIVFLAPFAVAFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
NLHGSPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRANDNRKHVVHVVIFFIFLVANA
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
GGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFVLDTYFYRKGGEERP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AALDPTPDGAALSIDGKINFVLLAAVIALVLMSGVWKPDISFDVWGTHVALQNLVRDVAL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHH
VVVTLASLALTPRSAREGNAFNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVH
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LVTGPDGRPIDAMYFWATGILSSFLDNAPTYLVFFNLAGGDAQTLMTTGASTLAAISAGA
HHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHHCCC
VFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWLFFTA
CEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRHAAWAGMASGIALGAAPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWH
CCCCHHHHHHHHCHHHCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
HHFGKIAAGWAIVFLAPFAVAFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
NLHGSPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRANDNRKHVVHVVIFFIFLVANA
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
GGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFVLDTYFYRKGGEERP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AALDPTPDGAALSIDGKINFVLLAAVIALVLMSGVWKPDISFDVWGTHVALQNLVRDVAL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHH
VVVTLASLALTPRSAREGNAFNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVH
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LVTGPDGRPIDAMYFWATGILSSFLDNAPTYLVFFNLAGGDAQTLMTTGASTLAAISAGA
HHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHHCCC
VFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWLFFTA
CEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA