| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116689098
Identifier: 116689098
GI number: 116689098
Start: 1187821
End: 1188138
Strand: Reverse
Name: 116689098
Synonym: Bcen2424_1075
Alternate gene names: NA
Gene position: 1188138-1187821 (Counterclockwise)
Preceding gene: 116689099
Following gene: 116689091
Centisome position: 34.1
GC content: 71.38
Gene sequence:
>318_bases ATGCGTTTCAAGGCACCCGACCTCGCGACCGCGCAGCATTGGGCCAACGTGCTCCAGGTAGCCGGCATCGGTTGCGAGCT GCACAACTGCTACGCGACCGGCGCGCTCGGCGGCCTGCCCGCCGATGCATGCACGCCCGAACTGTGGCTCGACGACGAAC GTGACGACGCGCTTGCCCGCCGGCTGCTCGATGCCGCGTCGCACGGCCCGTCGGCGGGCGCGGCGCCCTGGCGCTGCCGG CAATGCGGCGAAGCGCTCGAAGCGCAATTCACCGCGTGCTGGCAATGCGGCGCCGTGCGCGACCCGCTCGATGACTGA
Upstream 100 bases:
>100_bases CGCGCAGCTCGTGCACGAGGCGAGCCAGATCGTCCGCTGACCGCGCGACGTGTGCGACGGCCGGCGCCACGCGGGCCGGC CTTCATCGACAGGAGCCGCG
Downstream 100 bases:
>100_bases ACGCACTATCCTGGCGCACAGCGAAAAGGCCGGCATCGAGCCGGCCTTTTCATTTCGTCGCGCGCTGCGCTAGCGCGTCA CGATACCCAGACGGCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MRFKAPDLATAQHWANVLQVAGIGCELHNCYATGALGGLPADACTPELWLDDERDDALARRLLDAASHGPSAGAAPWRCR QCGEALEAQFTACWQCGAVRDPLDD
Sequences:
>Translated_105_residues MRFKAPDLATAQHWANVLQVAGIGCELHNCYATGALGGLPADACTPELWLDDERDDALARRLLDAASHGPSAGAAPWRCR QCGEALEAQFTACWQCGAVRDPLDD >Mature_105_residues MRFKAPDLATAQHWANVLQVAGIGCELHNCYATGALGGLPADACTPELWLDDERDDALARRLLDAASHGPSAGAAPWRCR QCGEALEAQFTACWQCGAVRDPLDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11237; Mature: 11237
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFKAPDLATAQHWANVLQVAGIGCELHNCYATGALGGLPADACTPELWLDDERDDALAR CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH RLLDAASHGPSAGAAPWRCRQCGEALEAQFTACWQCGAVRDPLDD HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRFKAPDLATAQHWANVLQVAGIGCELHNCYATGALGGLPADACTPELWLDDERDDALAR CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH RLLDAASHGPSAGAAPWRCRQCGEALEAQFTACWQCGAVRDPLDD HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA