| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is add [H]
Identifier: 116689043
GI number: 116689043
Start: 1127294
End: 1129342
Strand: Reverse
Name: add [H]
Synonym: Bcen2424_1020
Alternate gene names: 116689043
Gene position: 1129342-1127294 (Counterclockwise)
Preceding gene: 116689044
Following gene: 116689042
Centisome position: 32.42
GC content: 68.23
Gene sequence:
>2049_bases ATGGAAGCCTGGCTCGGCGATCTGCAGCAACTGCTCGCGCACGGCGAAGCGGCCGTGCTCGTGACGGTCGCGCACACCGA CGGCTCCGCGCCGCGCGAAGCCGGCACCAAGATGCTCGTCACGCGCGACACGGCCCGCCATACGATCGGCGGCGGTCATC TGGAGTGGAAGGCGATCGAGATCGCGCGGCATCTGCTGAAGGACGGCGCGCACGTGCCGCACGCACGCCGGCTCGAGCGG CTCGCGCTCGGTCCGAGCCTCGGCCAGTGCTGCGGCGGCGCCGTGGTGCTCGCGTTCGAGCGGCTCGACGTCGGCGACCT CGGCTGGATCATGTCGCTCGCGAAGCGCGTGGCGGCCGGCGCCGCGACCGTGCGTAGCGTATCATTCGGCCCCTCGCCGG GCGCGCCGCTGTTGAGCGAGCCCGAATCGGAAGCCGCACGCGCCGACTGCCTGCTGTGGGAAACCGGCGGCGTATCGCTG ATGACCGAAACGATCGCGCCGTATGCGTTCCCCGTCGTGCTGTTCGGCGCGGGGCACATCGGCACCGCGCTCGTGAAGGT GCTGGCGACGCTGCCGTGCCACGTGCGCTGGATCGACGGGCCCGATGCGGTGTTCCCGCCGGCCGACGCGCTCGCCGGCA TCTGCAACCTCGCGATCGACGCGGCCGCTTCCCCGGCGGACGCGGTCGACGCGGCGCCGCCGCAGTCCTACTTCGTCGTG ATGACGCACGACCACGCACTCGATTTCGTGCTGGCCGAGCGCATCCTGCGACGCGGCGACTATGCCTACTTCGGGATGAC CGGCTCGCGCACGAAACGCGTGCAGTTCGATCATCGCCTCGCCGCGATCGGCATCGACCCGGCCCAGGTCGCGCGGATGC GCTGCCCGATCGGTGTCGAAGGCATCATCGACAAGGCGCCCGAAGTGATCGCGATCTCGGTGGCCGCGCAGTTGCTGCAG GCCGTCGAGGCGAATGCGTCCGCGCAGGCTTCCCCCACTTACCGACCGACCAAGAACGACGCCATGACCCCGACATTCAA GGACAAGATTGCCCGTGCGCCGAAAGCGGAACTGCACATCCATATCGAAGGCTCGCTCGAGCCCGAGCTGATCTTCGCGC TCGCGCAGCGCAACGGCGTGAAGCTCGCGTACGACTCGATCGACGCGTTGCGCGCCGCGTACGCGTTCACCGACCTGCAA TCGTTCCTCGACATCTACTACGCCGGCGCGAGCGTGCTGCTCACCGAGCAGGATTTCTACGACATGACGGCCGCGTACTG CGAGCGCGCGCTCGCCGACAACGTCGTCCACACCGAACTGTTCTTCGACCCGCAGACGCACACCGAGCGCGGCGTGCCGA TCGAGACGGTCGTCGCGGGCATCGAGCGCGCACTCGCCGATGCCGAAGCGCGCGGGCTGTCGAGCAAGCTGATTCTGTGT TTCCTGCGCCACCTGTCCGAAGAGGACGCGCTCGCGACGTTCGAATCCGCGTTGCCGCTGTTCGAACGCTATCGTCATCG CCTGATCGGCGTGGGGCTCGATTCGTCCGAGCTCGGCCATCCGCCGACGAAGTTCGCACGCGTGTTCGAGAAGGCGCGCG CGCTCGGGCTGAAGCTCGTCGCGCACGCGGGCGAGGAAGGCCCGCCCGCCTACATCTACGAAGCGCTCGACGTGCTGAAG GTCGACCGGATCGACCACGGCGTGCGCAGCATCGAGGACGCGGCGCTCGTCGAGCGTCTCGCGAAAACGCGCACGGCGCT CACCGTCTGCCCGCTGTCGAACCTGAAGCTGTGCGTGTTCGACGACATGGCGAAGCACACGCTGAAGGCGCTGCTCGATC GCGGCGTGGCGGTGACGATCAACTCCGACGATCCGGCCTATTTCGGCGGCTACGTCAATGAAAACTACTTCGCGACGGCC GAAGGGCTGCAGCTCACGGATGCCGAAGTCCATGCGGTGATCCGCAACGGCTTCGAGGCGTCGTTCATCGAACCGGCGCA GCGCGACGCACTGTACGCGCGCCTCGACGCGTACTGGCAGGCCGCGTGA
Upstream 100 bases:
>100_bases CGTGCAGCCGGCCGGCCCGGCTCCCGTCCGTCCTCGTTGCCGCCGCGCCCGCCAGCGCGCGCCGCGTGTCGTGCCGCGTC GTCCCGAACGGAGCGTGCTG
Downstream 100 bases:
>100_bases CGGCCCGCATCGAGGCACGCTGACAGATGAAACGCGGCAACGGCATCCGCTTCGCGATTCCCCGTTCGGCCTTGCGCCGG GCCGGCCGCCTGCGTGCACG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDTARHTIGGGHLEWKAIEIARHLLKDGAHVPHARRLER LALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAGAATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSL MTETIAPYAFPVVLFGAGHIGTALVKVLATLPCHVRWIDGPDAVFPPADALAGICNLAIDAAASPADAVDAAPPQSYFVV MTHDHALDFVLAERILRRGDYAYFGMTGSRTKRVQFDHRLAAIGIDPAQVARMRCPIGVEGIIDKAPEVIAISVAAQLLQ AVEANASAQASPTYRPTKNDAMTPTFKDKIARAPKAELHIHIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQ SFLDIYYAGASVLLTEQDFYDMTAAYCERALADNVVHTELFFDPQTHTERGVPIETVVAGIERALADAEARGLSSKLILC FLRHLSEEDALATFESALPLFERYRHRLIGVGLDSSELGHPPTKFARVFEKARALGLKLVAHAGEEGPPAYIYEALDVLK VDRIDHGVRSIEDAALVERLAKTRTALTVCPLSNLKLCVFDDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATA EGLQLTDAEVHAVIRNGFEASFIEPAQRDALYARLDAYWQAA
Sequences:
>Translated_682_residues MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDTARHTIGGGHLEWKAIEIARHLLKDGAHVPHARRLER LALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAGAATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSL MTETIAPYAFPVVLFGAGHIGTALVKVLATLPCHVRWIDGPDAVFPPADALAGICNLAIDAAASPADAVDAAPPQSYFVV MTHDHALDFVLAERILRRGDYAYFGMTGSRTKRVQFDHRLAAIGIDPAQVARMRCPIGVEGIIDKAPEVIAISVAAQLLQ AVEANASAQASPTYRPTKNDAMTPTFKDKIARAPKAELHIHIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQ SFLDIYYAGASVLLTEQDFYDMTAAYCERALADNVVHTELFFDPQTHTERGVPIETVVAGIERALADAEARGLSSKLILC FLRHLSEEDALATFESALPLFERYRHRLIGVGLDSSELGHPPTKFARVFEKARALGLKLVAHAGEEGPPAYIYEALDVLK VDRIDHGVRSIEDAALVERLAKTRTALTVCPLSNLKLCVFDDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATA EGLQLTDAEVHAVIRNGFEASFIEPAQRDALYARLDAYWQAA >Mature_682_residues MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDTARHTIGGGHLEWKAIEIARHLLKDGAHVPHARRLER LALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAGAATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSL MTETIAPYAFPVVLFGAGHIGTALVKVLATLPCHVRWIDGPDAVFPPADALAGICNLAIDAAASPADAVDAAPPQSYFVV MTHDHALDFVLAERILRRGDYAYFGMTGSRTKRVQFDHRLAAIGIDPAQVARMRCPIGVEGIIDKAPEVIAISVAAQLLQ AVEANASAQASPTYRPTKNDAMTPTFKDKIARAPKAELHIHIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQ SFLDIYYAGASVLLTEQDFYDMTAAYCERALADNVVHTELFFDPQTHTERGVPIETVVAGIERALADAEARGLSSKLILC FLRHLSEEDALATFESALPLFERYRHRLIGVGLDSSELGHPPTKFARVFEKARALGLKLVAHAGEEGPPAYIYEALDVLK VDRIDHGVRSIEDAALVERLAKTRTALTVCPLSNLKLCVFDDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATA EGLQLTDAEVHAVIRNGFEASFIEPAQRDALYARLDAYWQAA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=373, Percent_Identity=24.9329758713137, Blast_Score=110, Evalue=5e-24, Organism=Escherichia coli, GI1787910, Length=333, Percent_Identity=28.2282282282282, Blast_Score=129, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6324188, Length=335, Percent_Identity=43.5820895522388, Blast_Score=281, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 73592; Mature: 73592
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDTARHTIGGGHLEWKAIE CCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHCCEEEEEECCHHHCCCCCCEEHHHHH IARHLLKDGAHVPHARRLERLALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAG HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHC AATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSLMTETIAPYAFPVVLFGAGHI HHHHEEECCCCCCCCCCCCCCCHHHHHCCEEEEECCCCHHHHHHHCHHHHHHHHCCCCHH GTALVKVLATLPCHVRWIDGPDAVFPPADALAGICNLAIDAAASPADAVDAAPPQSYFVV HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE MTHDHALDFVLAERILRRGDYAYFGMTGSRTKRVQFDHRLAAIGIDPAQVARMRCPIGVE EECCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCEEEEECCCHHHHHHHCCCCCCH GIIDKAPEVIAISVAAQLLQAVEANASAQASPTYRPTKNDAMTPTFKDKIARAPKAELHI HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEE HIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQSFLDIYYAGASVLLTEQDFY EEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHH DMTAAYCERALADNVVHTELFFDPQTHTERGVPIETVVAGIERALADAEARGLSSKLILC HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH FLRHLSEEDALATFESALPLFERYRHRLIGVGLDSSELGHPPTKFARVFEKARALGLKLV HHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHE AHAGEEGPPAYIYEALDVLKVDRIDHGVRSIEDAALVERLAKTRTALTVCPLSNLKLCVF ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEE DDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATAEGLQLTDAEVHAVIRNGFEA HHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEECCCCEECHHHHHHHHHCCCCC SFIEPAQRDALYARLDAYWQAA CCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDTARHTIGGGHLEWKAIE CCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHCCEEEEEECCHHHCCCCCCEEHHHHH IARHLLKDGAHVPHARRLERLALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAG HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHC AATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSLMTETIAPYAFPVVLFGAGHI HHHHEEECCCCCCCCCCCCCCCHHHHHCCEEEEECCCCHHHHHHHCHHHHHHHHCCCCHH GTALVKVLATLPCHVRWIDGPDAVFPPADALAGICNLAIDAAASPADAVDAAPPQSYFVV HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE MTHDHALDFVLAERILRRGDYAYFGMTGSRTKRVQFDHRLAAIGIDPAQVARMRCPIGVE EECCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCEEEEECCCHHHHHHHCCCCCCH GIIDKAPEVIAISVAAQLLQAVEANASAQASPTYRPTKNDAMTPTFKDKIARAPKAELHI HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEE HIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQSFLDIYYAGASVLLTEQDFY EEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHH DMTAAYCERALADNVVHTELFFDPQTHTERGVPIETVVAGIERALADAEARGLSSKLILC HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH FLRHLSEEDALATFESALPLFERYRHRLIGVGLDSSELGHPPTKFARVFEKARALGLKLV HHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHE AHAGEEGPPAYIYEALDVLKVDRIDHGVRSIEDAALVERLAKTRTALTVCPLSNLKLCVF ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEE DDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATAEGLQLTDAEVHAVIRNGFEA HHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEECCCCEECHHHHHHHHHCCCCC SFIEPAQRDALYARLDAYWQAA CCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA