| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is guaD [H]
Identifier: 116689041
GI number: 116689041
Start: 1125589
End: 1126908
Strand: Reverse
Name: guaD [H]
Synonym: Bcen2424_1018
Alternate gene names: 116689041
Gene position: 1126908-1125589 (Counterclockwise)
Preceding gene: 116689042
Following gene: 116689040
Centisome position: 32.35
GC content: 68.79
Gene sequence:
>1320_bases ATGACGCAAACCGCTTTCCGTTCCCAACTGCTGACCTTCAACGGCGACCCGGCGCAATCGAGCCAGGCCACGAACTACGA GACCGACGGGCTCCTGATCGTCGACGACGGCAAGGTCGTCGCAGCCGGCCCGTATGCGCCGCTCGCCGCGACCCTTGCGC GCGACGCGGTGGTCCACGACCTGCGCGACAAGCTGATCGTGCCCGGCTTCATCGACACGCACATCCACTATCCGCAGACG GACATGATCGCGTCGCCGGCGCCCGGCCTGTTGCCGTGGCTCGACAAGTACACGTTCCCGACCGAGCGCCAGTTCGGCGA CCCCGAGCACGCGCGCGAAGTCGCCGACTTCTTCGTCGACGAACTGCTCGCGTGCGGCACGACGAGCGCACTCGTCTACT GCACGGTGCACAAGCAGTCGGCCGATGCACTGTTCGCGGCGAGCGACGCGCGCGATCTGCGGATGATCGCGGGCAAGGTG CTGATGGATCGCAACTGCCCCGAATTCCTGCGCGACACCGCGCAGTCGGGCTATGACGACAGCGCCGAGCTGATCGACCG CTGGCACGGCAAGGGCCGCCAGATGTACGCGCTCACGCCGCGCTTCGCGCCGACGTCGACCGAGGCGCAGCTGGAAGCGT GCGGCGAACTCGCGCGCCGCCATCCGGACGTGTTCGTGCAAAGCCACGTCGCGGAAAACGTCGACGAGGTGAAATGGGTG GCCGAGCTGTTCCCCGGCCATCGCAGCTATCTCGACATCTACGACCGCTACGGGCTGCTGCGTCCGCGCGCGGTGTACGG TCACTGCATCCATCTCGACGACGAGGATCGCCGCCGGATGGCCGAGACACGCACCGTCGTCGCGCACTGCCCGACATCCA ACTTCTTCCTCGGCAGCGGCCTGTTCGACTTCGACAAGGCCGGCGAACATGACGTGCCGGTCACGCTCGCGACCGACGTC GGCGGCGGCACGTCGTTCTCGATGCTGCAGACGATGAACGAGGCACACAAGGTCGCGCGGCTGTCGGGCCATCACCTGAC CGCCACGCGGATGTTCTGGCTCGCGACGGCCGGCGCCGCGCAGGCGCTCGACCTCGCCGACACGGTCGGCACGCTCAAGC CGCGCACCGAAGCCGACTTCGTCGTGCTCGATCCGCAGGCGACGCCGCTGCTCGCGCGCCGCACGAAGCGCGCGGAGTCG CTCGAGGAACTGCTGTTCGCGTTCGCGCTGCTCGGCGACGACCGCGCGGTGTACCGCACCTATGCAGCCGGCGAACTCGT GCACGAGCGCGGCGCCGCGCGCCGCCCGGCCGCCGCGTAA
Upstream 100 bases:
>100_bases CACATCACGTGCGGCCACCGCTCGCGAAGCACCGTCGCGCCCCCGCGCGGCATCGATCGCTTTCTTCTGTTCGCCTTACC TTGATGCAGGACCCTTCGTC
Downstream 100 bases:
>100_bases CGTCCGCGGGTTGCCTGCGGGTTGCCTGCGGGTGCCCGTCCGGCATGCGCGGCCGCCTGGCCGCCGTGCATGCCGGCAAT CGAAACCCTTCGGTACGCGG
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTQTAFRSQLLTFNGDPAQSSQATNYETDGLLIVDDGKVVAAGPYAPLAATLARDAVVHDLRDKLIVPGFIDTHIHYPQT DMIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVDELLACGTTSALVYCTVHKQSADALFAASDARDLRMIAGKV LMDRNCPEFLRDTAQSGYDDSAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACGELARRHPDVFVQSHVAENVDEVKWV AELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSGLFDFDKAGEHDVPVTLATDV GGGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAAQALDLADTVGTLKPRTEADFVVLDPQATPLLARRTKRAES LEELLFAFALLGDDRAVYRTYAAGELVHERGAARRPAAA
Sequences:
>Translated_439_residues MTQTAFRSQLLTFNGDPAQSSQATNYETDGLLIVDDGKVVAAGPYAPLAATLARDAVVHDLRDKLIVPGFIDTHIHYPQT DMIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVDELLACGTTSALVYCTVHKQSADALFAASDARDLRMIAGKV LMDRNCPEFLRDTAQSGYDDSAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACGELARRHPDVFVQSHVAENVDEVKWV AELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSGLFDFDKAGEHDVPVTLATDV GGGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAAQALDLADTVGTLKPRTEADFVVLDPQATPLLARRTKRAES LEELLFAFALLGDDRAVYRTYAAGELVHERGAARRPAAA >Mature_438_residues TQTAFRSQLLTFNGDPAQSSQATNYETDGLLIVDDGKVVAAGPYAPLAATLARDAVVHDLRDKLIVPGFIDTHIHYPQTD MIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVDELLACGTTSALVYCTVHKQSADALFAASDARDLRMIAGKVL MDRNCPEFLRDTAQSGYDDSAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACGELARRHPDVFVQSHVAENVDEVKWVA ELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSGLFDFDKAGEHDVPVTLATDVG GGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAAQALDLADTVGTLKPRTEADFVVLDPQATPLLARRTKRAESL EELLFAFALLGDDRAVYRTYAAGELVHERGAARRPAAA
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=379, Percent_Identity=33.245382585752, Blast_Score=201, Evalue=8e-52, Organism=Escherichia coli, GI1789249, Length=416, Percent_Identity=50, Blast_Score=448, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6319963, Length=402, Percent_Identity=30.5970149253731, Blast_Score=196, Evalue=6e-51, Organism=Drosophila melanogaster, GI24643849, Length=452, Percent_Identity=31.4159292035398, Blast_Score=197, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 48422; Mature: 48291
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTAFRSQLLTFNGDPAQSSQATNYETDGLLIVDDGKVVAAGPYAPLAATLARDAVVHD CCCHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH LRDKLIVPGFIDTHIHYPQTDMIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVD HHHCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ELLACGTTSALVYCTVHKQSADALFAASDARDLRMIAGKVLMDRNCPEFLRDTAQSGYDD HHHHCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC SAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACGELARRHPDVFVQSHVAENVDEVKWV HHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH AELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSG HHHCCCCHHHHHHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHEEEEECCCCCEEECCC LFDFDKAGEHDVPVTLATDVGGGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAA CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCH QALDLADTVGTLKPRTEADFVVLDPQATPLLARRTKRAESLEELLFAFALLGDDRAVYRT HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YAAGELVHERGAARRPAAA HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TQTAFRSQLLTFNGDPAQSSQATNYETDGLLIVDDGKVVAAGPYAPLAATLARDAVVHD CCHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH LRDKLIVPGFIDTHIHYPQTDMIASPAPGLLPWLDKYTFPTERQFGDPEHAREVADFFVD HHHCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ELLACGTTSALVYCTVHKQSADALFAASDARDLRMIAGKVLMDRNCPEFLRDTAQSGYDD HHHHCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC SAELIDRWHGKGRQMYALTPRFAPTSTEAQLEACGELARRHPDVFVQSHVAENVDEVKWV HHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH AELFPGHRSYLDIYDRYGLLRPRAVYGHCIHLDDEDRRRMAETRTVVAHCPTSNFFLGSG HHHCCCCHHHHHHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHEEEEECCCCCEEECCC LFDFDKAGEHDVPVTLATDVGGGTSFSMLQTMNEAHKVARLSGHHLTATRMFWLATAGAA CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCH QALDLADTVGTLKPRTEADFVVLDPQATPLLARRTKRAESLEELLFAFALLGDDRAVYRT HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YAAGELVHERGAARRPAAA HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]