| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689016
Identifier: 116689016
GI number: 116689016
Start: 1100693
End: 1100986
Strand: Reverse
Name: 116689016
Synonym: Bcen2424_0993
Alternate gene names: NA
Gene position: 1100986-1100693 (Counterclockwise)
Preceding gene: 116689017
Following gene: 116689015
Centisome position: 31.6
GC content: 65.31
Gene sequence:
>294_bases ATGACCGACCTGTCGACCGCGACGGACCACGTCGATTACGAAGGCTTCGAGATCCATGTCGTGCCGGCCACGCTGCCAGG CAGCGACACGCGCTATACCTACACCGGCTACGTATGCCATCCGGGCGTGAACCCGGCGCTGCCCGGCCATGCGGTGCCGT TTCACGCGGACGGCGAGGAAAGCTTCGCGAGCCTCGACGAGGCGACCCACGAAGCCATCCACATCGGCAAGAGCATCATC GACGGCACGCACCCCGACCTGTCGGTACTGTCGCTCGTCACGCACGGCTTCTGA
Upstream 100 bases:
>100_bases CGCCTAGAATTCGTTCAACACGGCGACACGAACGCCGCCGCGTGTTCGATGTATTCGATGCCGCACGCGCCACCCCTGCG CGCGGCACACGGAGATCGCC
Downstream 100 bases:
>100_bases ACCGGCCGACGCACGTCGCCGGCGATTGCCCGGGAGGTGCGGTCGAGGTTGCCGCCTCGGCGGACCGCTGCGCCAGCCGA ACGATCGACCGCAGCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MTDLSTATDHVDYEGFEIHVVPATLPGSDTRYTYTGYVCHPGVNPALPGHAVPFHADGEESFASLDEATHEAIHIGKSII DGTHPDLSVLSLVTHGF
Sequences:
>Translated_97_residues MTDLSTATDHVDYEGFEIHVVPATLPGSDTRYTYTGYVCHPGVNPALPGHAVPFHADGEESFASLDEATHEAIHIGKSII DGTHPDLSVLSLVTHGF >Mature_96_residues TDLSTATDHVDYEGFEIHVVPATLPGSDTRYTYTGYVCHPGVNPALPGHAVPFHADGEESFASLDEATHEAIHIGKSIID GTHPDLSVLSLVTHGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10355; Mature: 10224
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSTATDHVDYEGFEIHVVPATLPGSDTRYTYTGYVCHPGVNPALPGHAVPFHADGEE CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHH SFASLDEATHEAIHIGKSIIDGTHPDLSVLSLVTHGF HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure TDLSTATDHVDYEGFEIHVVPATLPGSDTRYTYTGYVCHPGVNPALPGHAVPFHADGEE CCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHH SFASLDEATHEAIHIGKSIIDGTHPDLSVLSLVTHGF HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA