Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689009

Identifier: 116689009

GI number: 116689009

Start: 1094706

End: 1095107

Strand: Direct

Name: 116689009

Synonym: Bcen2424_0986

Alternate gene names: NA

Gene position: 1094706-1095107 (Clockwise)

Preceding gene: 116689008

Following gene: 116689010

Centisome position: 31.42

GC content: 69.15

Gene sequence:

>402_bases
ATGGCTGTCTCTACCGTTTCACGTCGCATCGTTTCGCTCGCGCTGTTTGCCGCGGGCCTGTCGGCCGTCGTCGCACCGTT
CGCCGCGCATGCGGACGAGATTCTCGTCGGCACGCCCGTGATCGCGCCGCAGGGGCGCATGGTCATCGCGGAGCCGGTCG
CCGTGCGCACCGAGGAAATCGTCGTCGTCGCGCCGAATGCGCCGCCGCCGGTGCGCTATGAAGTCGTGCCGGCCACGCGC
GTGGGCTACGTGTGGGAGCGCGGACACTGGCACTGGGACCATGGCCGCTACGTATGGATCGGCGGCCACTGGGAAACCGA
GCGCGTCGGCATGCAATGGGTGCCGGGGCATTGGGACCAGCGCGGTCCGAACTGGTTCTGGACGCGCGGCCACTGGGCTT
GA

Upstream 100 bases:

>100_bases
GCACTTTCGGGCACGCCGTAACACGGCGCCTGTCGGCCGCAATCGACTCTCCCGCATTGAACGAATACGCTCGCGTCACT
TGTTCAACCAGGAGGTTGTG

Downstream 100 bases:

>100_bases
GGCAGACGCGCGATGAAAAGAACCGCAATCGCCATCGCGCTCGTCGCGATCACGCTGGCCGGATGCACCGTCGTGCCCGC
GCGGCCGGTCTACTACCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEIVVVAPNAPPPVRYEVVPATR
VGYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQRGPNWFWTRGHWA

Sequences:

>Translated_133_residues
MAVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEIVVVAPNAPPPVRYEVVPATR
VGYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQRGPNWFWTRGHWA
>Mature_132_residues
AVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEIVVVAPNAPPPVRYEVVPATRV
GYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQRGPNWFWTRGHWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14932; Mature: 14801

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEECCCCCEEEECCCEECCCEE
VVVAPNAPPPVRYEVVPATRVGYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQ
EEECCCCCCCEEEEEECCCEECEEEECCCEECCCCEEEEECCCCCCCCCCCEECCCCCCC
RGPNWFWTRGHWA
CCCCEEEECCCCC
>Mature Secondary Structure 
AVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEECCCCCEEEECCCEECCCEE
VVVAPNAPPPVRYEVVPATRVGYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQ
EEECCCCCCCEEEEEECCCEECEEEECCCEECCCCEEEEECCCCCCCCCCCEECCCCCCC
RGPNWFWTRGHWA
CCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA