| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689009
Identifier: 116689009
GI number: 116689009
Start: 1094706
End: 1095107
Strand: Direct
Name: 116689009
Synonym: Bcen2424_0986
Alternate gene names: NA
Gene position: 1094706-1095107 (Clockwise)
Preceding gene: 116689008
Following gene: 116689010
Centisome position: 31.42
GC content: 69.15
Gene sequence:
>402_bases ATGGCTGTCTCTACCGTTTCACGTCGCATCGTTTCGCTCGCGCTGTTTGCCGCGGGCCTGTCGGCCGTCGTCGCACCGTT CGCCGCGCATGCGGACGAGATTCTCGTCGGCACGCCCGTGATCGCGCCGCAGGGGCGCATGGTCATCGCGGAGCCGGTCG CCGTGCGCACCGAGGAAATCGTCGTCGTCGCGCCGAATGCGCCGCCGCCGGTGCGCTATGAAGTCGTGCCGGCCACGCGC GTGGGCTACGTGTGGGAGCGCGGACACTGGCACTGGGACCATGGCCGCTACGTATGGATCGGCGGCCACTGGGAAACCGA GCGCGTCGGCATGCAATGGGTGCCGGGGCATTGGGACCAGCGCGGTCCGAACTGGTTCTGGACGCGCGGCCACTGGGCTT GA
Upstream 100 bases:
>100_bases GCACTTTCGGGCACGCCGTAACACGGCGCCTGTCGGCCGCAATCGACTCTCCCGCATTGAACGAATACGCTCGCGTCACT TGTTCAACCAGGAGGTTGTG
Downstream 100 bases:
>100_bases GGCAGACGCGCGATGAAAAGAACCGCAATCGCCATCGCGCTCGTCGCGATCACGCTGGCCGGATGCACCGTCGTGCCCGC GCGGCCGGTCTACTACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MAVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEIVVVAPNAPPPVRYEVVPATR VGYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQRGPNWFWTRGHWA
Sequences:
>Translated_133_residues MAVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEIVVVAPNAPPPVRYEVVPATR VGYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQRGPNWFWTRGHWA >Mature_132_residues AVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEIVVVAPNAPPPVRYEVVPATRV GYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQRGPNWFWTRGHWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14932; Mature: 14801
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEECCCCCEEEECCCEECCCEE VVVAPNAPPPVRYEVVPATRVGYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQ EEECCCCCCCEEEEEECCCEECEEEECCCEECCCCEEEEECCCCCCCCCCCEECCCCCCC RGPNWFWTRGHWA CCCCEEEECCCCC >Mature Secondary Structure AVSTVSRRIVSLALFAAGLSAVVAPFAAHADEILVGTPVIAPQGRMVIAEPVAVRTEEI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEECCCCCEEEECCCEECCCEE VVVAPNAPPPVRYEVVPATRVGYVWERGHWHWDHGRYVWIGGHWETERVGMQWVPGHWDQ EEECCCCCCCEEEEEECCCEECEEEECCCEECCCCEEEEECCCCCCCCCCCEECCCCCCC RGPNWFWTRGHWA CCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA