| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688972
Identifier: 116688972
GI number: 116688972
Start: 1055022
End: 1055951
Strand: Reverse
Name: 116688972
Synonym: Bcen2424_0949
Alternate gene names: NA
Gene position: 1055951-1055022 (Counterclockwise)
Preceding gene: 116688974
Following gene: 116688971
Centisome position: 30.31
GC content: 73.76
Gene sequence:
>930_bases ATGCCGCTTCCCGACATCCCCCGCCTCGGCTTTATCGGCGCCGGCCGCCTCGCGCGCTGTATTGCGCAGCGTTTCGCGCA GGCCGGCTTCCCGGTCATCGCGATCGCGAGCCGCACGCCCGCGTCGGCCACCGGCCTCGCCGCACGCATCGACGGCTGCC GCGCGGTCGACACCCCGCAGCAGGTGGTCGACGCCGCCGACCTGATCTTCGTGACGACACCCGACGATCACCTCGCGTCG AGCGCCGCGGCGCTGCACTTCGACGCATCGCGCGCCGCCGGCCAGGCGCTCGTCCATTGCAGCGGCGCGTCGACGGTCGC GCTGCTCGATCCCGCGAAGCAGCAAGGCGCGGCCACCGGCGGCTTCCATCCGCTCTATCTGTTCGGCGGCACCGATGCCG ACCTCGCGCGCATCGACGGCTGCTCGGTCACGATCGAAGCGGACGGTGCGCTGCACGCGACACTGCTGCGACTTGCCGCC GCACTCGGCTGCCATCCGCTGTCGATTCCGGCCGGCGGCCGGATGCTGTATCACGCGGCCGCGCACTACGCGGCGAGCTT CGCGCTGTGCGGGCTGTCGGAAGCGGTCGAGCTGTGGCGCGGCCTCGGTTTTGACGAGGACGCCGCGCTGCGCGCGCTGT TGCCGATGCTCGCCGGCACGATCGAGACCGCCCGCGACAAGGGGCTCGCGAATGCGCTGGCCGGGCCGGTATCGCGCGGC GACACGGGCATCGTCGAGCGCCAGCTCGCGCTGCTCGAGGCGCGCGGCGGCGATCATGCGGCGCTGTACGCGCTGCTGAC GCGCCGCGCGGTCGCGCTCGCGGCGAAGCGCGCAGCACCGCCGGCGTCGTTGCCGGCGCTGGCCGAAGCCGTCGAAACCT CGCTCGCACGCGTGGCCGCGCACCCCTCCCCGTCGCGAGACGAGGCGTGA
Upstream 100 bases:
>100_bases ACCGGTAATTCATACGTGCATCCGTCCCTGCGCCTTCCACGACACCGCCGTCATTCCTGCGATACTGGCGGTTGCTTCGT TTTCGCTTACATCCGCCGCC
Downstream 100 bases:
>100_bases TAAGGTGTCGGCCGATGCGCCGCCAACCGGCGTTGGCGGCCGCACGCTACTGACTGTATAAAAAGGATGCCAACGATGTT CGGCGAGATCGCCCGTTTTC
Product: NADP oxidoreductase, coenzyme F420-dependent
Products: NA
Alternate protein names: Cytoplasmic Protein; Pyrroline-5-Carboxylate Reductase; Oxidoreductase/Dehydrogenase Rossmann-Like Domain Protein; NADP Oxidoreductase; Oxidoreductase/Dehydrogenase Rossmann-Like Domain; Oxidoreductase; Oxidoreductase Domain-Containing Protein; Pantoate/Beta-Alanine Ligase
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPLPDIPRLGFIGAGRLARCIAQRFAQAGFPVIAIASRTPASATGLAARIDGCRAVDTPQQVVDAADLIFVTTPDDHLAS SAAALHFDASRAAGQALVHCSGASTVALLDPAKQQGAATGGFHPLYLFGGTDADLARIDGCSVTIEADGALHATLLRLAA ALGCHPLSIPAGGRMLYHAAAHYAASFALCGLSEAVELWRGLGFDEDAALRALLPMLAGTIETARDKGLANALAGPVSRG DTGIVERQLALLEARGGDHAALYALLTRRAVALAAKRAAPPASLPALAEAVETSLARVAAHPSPSRDEA
Sequences:
>Translated_309_residues MPLPDIPRLGFIGAGRLARCIAQRFAQAGFPVIAIASRTPASATGLAARIDGCRAVDTPQQVVDAADLIFVTTPDDHLAS SAAALHFDASRAAGQALVHCSGASTVALLDPAKQQGAATGGFHPLYLFGGTDADLARIDGCSVTIEADGALHATLLRLAA ALGCHPLSIPAGGRMLYHAAAHYAASFALCGLSEAVELWRGLGFDEDAALRALLPMLAGTIETARDKGLANALAGPVSRG DTGIVERQLALLEARGGDHAALYALLTRRAVALAAKRAAPPASLPALAEAVETSLARVAAHPSPSRDEA >Mature_308_residues PLPDIPRLGFIGAGRLARCIAQRFAQAGFPVIAIASRTPASATGLAARIDGCRAVDTPQQVVDAADLIFVTTPDDHLASS AAALHFDASRAAGQALVHCSGASTVALLDPAKQQGAATGGFHPLYLFGGTDADLARIDGCSVTIEADGALHATLLRLAAA LGCHPLSIPAGGRMLYHAAAHYAASFALCGLSEAVELWRGLGFDEDAALRALLPMLAGTIETARDKGLANALAGPVSRGD TGIVERQLALLEARGGDHAALYALLTRRAVALAAKRAAPPASLPALAEAVETSLARVAAHPSPSRDEA
Specific function: Unknown
COG id: COG5495
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31506; Mature: 31375
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPDIPRLGFIGAGRLARCIAQRFAQAGFPVIAIASRTPASATGLAARIDGCRAVDTPQ CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCHH QVVDAADLIFVTTPDDHLASSAAALHFDASRAAGQALVHCSGASTVALLDPAKQQGAATG HHHCHHCEEEEECCCHHHHHHHHHEEECCHHHHCCEEEEECCCCEEEEECCHHHCCCCCC GFHPLYLFGGTDADLARIDGCSVTIEADGALHATLLRLAAALGCHPLSIPAGGRMLYHAA CCCEEEEECCCCCCHHEECCCEEEEECCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHH AHYAASFALCGLSEAVELWRGLGFDEDAALRALLPMLAGTIETARDKGLANALAGPVSRG HHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DTGIVERQLALLEARGGDHAALYALLTRRAVALAAKRAAPPASLPALAEAVETSLARVAA CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC HPSPSRDEA CCCCCCCCC >Mature Secondary Structure PLPDIPRLGFIGAGRLARCIAQRFAQAGFPVIAIASRTPASATGLAARIDGCRAVDTPQ CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCHH QVVDAADLIFVTTPDDHLASSAAALHFDASRAAGQALVHCSGASTVALLDPAKQQGAATG HHHCHHCEEEEECCCHHHHHHHHHEEECCHHHHCCEEEEECCCCEEEEECCHHHCCCCCC GFHPLYLFGGTDADLARIDGCSVTIEADGALHATLLRLAAALGCHPLSIPAGGRMLYHAA CCCEEEEECCCCCCHHEECCCEEEEECCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHH AHYAASFALCGLSEAVELWRGLGFDEDAALRALLPMLAGTIETARDKGLANALAGPVSRG HHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DTGIVERQLALLEARGGDHAALYALLTRRAVALAAKRAAPPASLPALAEAVETSLARVAA CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC HPSPSRDEA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA