The gene/protein map for NC_005966 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688955

Identifier: 116688955

GI number: 116688955

Start: 1040669

End: 1041013

Strand: Direct

Name: 116688955

Synonym: Bcen2424_0932

Alternate gene names: NA

Gene position: 1040669-1041013 (Clockwise)

Preceding gene: 116688952

Following gene: 116688956

Centisome position: 29.87

GC content: 57.97

Gene sequence:

>345_bases
ATGTCCGATTTCATCACCGTTCTGCGCAAAACCTGCCCGACGCCTGTCCTTGACGCGACCAAGTGGAAGCGCATTGGCGG
CGATCCGCACACCGTGAACCTCAACGCGTACGTCTCGAAGGACGGCAGCAAGATCATGGGCACCTGGATCTGCACGCCGG
GCAAGTTCGAGGTGAACTACGAAAAATGGGAGTACTGCCACTTCCTCGATGGCTACTGCATCATCACGCCGGAAGGTGAG
GAGCCGCAGCACTTGAAAGCTGGCGATGTGTTCGTGATCGAACCCGGCATGAAGGGCACGTGGGAAGTGGTGGAGACGGT
GCGCAAGTACTTCGTCTTTGCCTGA

Upstream 100 bases:

>100_bases
GTCGAAAATAGACGAGTCGGCGTCGGAAGCATACAAGCCCGGGTAAGGCTTTCGAACTAACGTGACAGACCTCTCACACG
ATCGTCAGTCTGGAGCCGAC

Downstream 100 bases:

>100_bases
CGGGGCGGTCGATTCGACTCAACCCACGCGCCACATATCTTCCCGGTTCCCGAAGCCGTGACGGCAACCGAGGACTCCGG
CTCGACCCAACTTGACTCGG

Product: protein of unknown function DUF861, cupin_3

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSDFITVLRKTCPTPVLDATKWKRIGGDPHTVNLNAYVSKDGSKIMGTWICTPGKFEVNYEKWEYCHFLDGYCIITPEGE
EPQHLKAGDVFVIEPGMKGTWEVVETVRKYFVFA

Sequences:

>Translated_114_residues
MSDFITVLRKTCPTPVLDATKWKRIGGDPHTVNLNAYVSKDGSKIMGTWICTPGKFEVNYEKWEYCHFLDGYCIITPEGE
EPQHLKAGDVFVIEPGMKGTWEVVETVRKYFVFA
>Mature_113_residues
SDFITVLRKTCPTPVLDATKWKRIGGDPHTVNLNAYVSKDGSKIMGTWICTPGKFEVNYEKWEYCHFLDGYCIITPEGEE
PQHLKAGDVFVIEPGMKGTWEVVETVRKYFVFA

Specific function: Unknown

COG id: COG3450

COG function: function code R; Predicted enzyme of the cupin superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13008; Mature: 12877

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFITVLRKTCPTPVLDATKWKRIGGDPHTVNLNAYVSKDGSKIMGTWICTPGKFEVNY
CCHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCEEEEEEEECCCEEEECC
EKWEYCHFLDGYCIITPEGEEPQHLKAGDVFVIEPGMKGTWEVVETVRKYFVFA
CCEEEEEEECCEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDFITVLRKTCPTPVLDATKWKRIGGDPHTVNLNAYVSKDGSKIMGTWICTPGKFEVNY
CHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCEEEEEEEECCCEEEECC
EKWEYCHFLDGYCIITPEGEEPQHLKAGDVFVIEPGMKGTWEVVETVRKYFVFA
CCEEEEEEECCEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA