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The map label for this gene is rfbF [H]

Identifier: 116688898

GI number: 116688898

Start: 978358

End: 979218

Strand: Direct

Name: rfbF [H]

Synonym: Bcen2424_0875

Alternate gene names: 116688898

Gene position: 978358-979218 (Clockwise)

Preceding gene: 116688897

Following gene: 116688899

Centisome position: 28.08

GC content: 63.41

Gene sequence:

>861_bases
GTGATCGTGTTCTACCGACCGGATAGCGGTTGCGTAGCCCGTGCGAACCGGCTCGCCAAAGTATGGCCATGCGTGGTGGT
GGATAACACGGAGAGCATCAGTGCGCCGGAAGCGCTCGGGCTCGACGCGCGTATCGACTATGTCGCGAACGGCGCCAATC
TTGGCATCGCGACGGCGCTCAACCAGGGCATCGAACGGCTGGCCGCGGCGAACTGTACGTCGGTATTGCTGTTCGATCAG
GATAGCGAGCCGTCAGACGAATTGCTGGTCGAACTGCCTCGCACAATGGCGGCCGAGCGCATGCGTAATCGTCGCGTGGC
GCTCGTCGGTCCCGCGTACGAGGATGCGCGATTGGGCGGCGTCGCGCCGTTCGTCCGCTTCGGGTACGTGAAGTTGCGCC
GGGTTCAGCCGGACGGTGTGCGACCGGTCGAGGTCGACTTTCTGATTACGTCGGGATCGTGCGTGAATCTCGCTGTATGG
CGTGACATCGGCCCGATGGACGATTCGCTCTTCATCGATTTCGTCGATCTCGAATGGTGTGTCCGCGCGCGCTCGAAGGG
GTATTCGGTGCTCGGCGCGCCGGCGTTGCGGTTGAAGCACGAACTGGGCGGCGAGCCGGTGAAGGTGTTCGGGCGGAGCT
ACCCGGGGCACAGCGCGGTTCGGCACTACTATCTGTTCCGCAACGCGGTCGCGCTGATCCGGCGTTCCTACGTACCCTGG
AGCTGGAAGTCGACCGAACTGGTCAAGATGCCGGTCCGGCTTGCGATTTATGCGTTGTTCATGCAGCCGCGAATGGCGCA
CCTCCGGCTCTCATTGCTCGGCATCTGGCACGGACTGACCGGTCGTACCGGTGCGCTCTGA

Upstream 100 bases:

>100_bases
GCATTCGGGTTGCGGTTGCCGGACTGGGCCGATGCGCTGACGCTGTGCCTGAGTGAGTAACTTGAATCAGAATTCCGCGG
TTCAGGAGCAGACCGGTGTC

Downstream 100 bases:

>100_bases
CGTACCGGCCCATTTTTCAATCTCATTCAACTAGAAAGCTTGCATGCTGACTCTTTCACTTGCTGATCTCAAACAGAGCA
TTGCCTCGTGGCGGTTATGG

Product: rhamnosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIVFYRPDSGCVARANRLAKVWPCVVVDNTESISAPEALGLDARIDYVANGANLGIATALNQGIERLAAANCTSVLLFDQ
DSEPSDELLVELPRTMAAERMRNRRVALVGPAYEDARLGGVAPFVRFGYVKLRRVQPDGVRPVEVDFLITSGSCVNLAVW
RDIGPMDDSLFIDFVDLEWCVRARSKGYSVLGAPALRLKHELGGEPVKVFGRSYPGHSAVRHYYLFRNAVALIRRSYVPW
SWKSTELVKMPVRLAIYALFMQPRMAHLRLSLLGIWHGLTGRTGAL

Sequences:

>Translated_286_residues
MIVFYRPDSGCVARANRLAKVWPCVVVDNTESISAPEALGLDARIDYVANGANLGIATALNQGIERLAAANCTSVLLFDQ
DSEPSDELLVELPRTMAAERMRNRRVALVGPAYEDARLGGVAPFVRFGYVKLRRVQPDGVRPVEVDFLITSGSCVNLAVW
RDIGPMDDSLFIDFVDLEWCVRARSKGYSVLGAPALRLKHELGGEPVKVFGRSYPGHSAVRHYYLFRNAVALIRRSYVPW
SWKSTELVKMPVRLAIYALFMQPRMAHLRLSLLGIWHGLTGRTGAL
>Mature_286_residues
MIVFYRPDSGCVARANRLAKVWPCVVVDNTESISAPEALGLDARIDYVANGANLGIATALNQGIERLAAANCTSVLLFDQ
DSEPSDELLVELPRTMAAERMRNRRVALVGPAYEDARLGGVAPFVRFGYVKLRRVQPDGVRPVEVDFLITSGSCVNLAVW
RDIGPMDDSLFIDFVDLEWCVRARSKGYSVLGAPALRLKHELGGEPVKVFGRSYPGHSAVRHYYLFRNAVALIRRSYVPW
SWKSTELVKMPVRLAIYALFMQPRMAHLRLSLLGIWHGLTGRTGAL

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR006446 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 31757; Mature: 31757

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFYRPDSGCVARANRLAKVWPCVVVDNTESISAPEALGLDARIDYVANGANLGIATAL
CEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCCCEEEEEECCCCCCHHHHH
NQGIERLAAANCTSVLLFDQDSEPSDELLVELPRTMAAERMRNRRVALVGPAYEDARLGG
HHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
VAPFVRFGYVKLRRVQPDGVRPVEVDFLITSGSCVNLAVWRDIGPMDDSLFIDFVDLEWC
CHHHHHHCEEEEEEECCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEECHHHH
VRARSKGYSVLGAPALRLKHELGGEPVKVFGRSYPGHSAVRHYYLFRNAVALIRRSYVPW
HHHHCCCCEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
SWKSTELVKMPVRLAIYALFMQPRMAHLRLSLLGIWHGLTGRTGAL
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIVFYRPDSGCVARANRLAKVWPCVVVDNTESISAPEALGLDARIDYVANGANLGIATAL
CEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCCCEEEEEECCCCCCHHHHH
NQGIERLAAANCTSVLLFDQDSEPSDELLVELPRTMAAERMRNRRVALVGPAYEDARLGG
HHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
VAPFVRFGYVKLRRVQPDGVRPVEVDFLITSGSCVNLAVWRDIGPMDDSLFIDFVDLEWC
CHHHHHHCEEEEEEECCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEECHHHH
VRARSKGYSVLGAPALRLKHELGGEPVKVFGRSYPGHSAVRHYYLFRNAVALIRRSYVPW
HHHHCCCCEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
SWKSTELVKMPVRLAIYALFMQPRMAHLRLSLLGIWHGLTGRTGAL
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]