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The map label for this gene is yqgF [C]

Identifier: 116688888

GI number: 116688888

Start: 969422

End: 969871

Strand: Direct

Name: yqgF [C]

Synonym: Bcen2424_0865

Alternate gene names: 116688888

Gene position: 969422-969871 (Clockwise)

Preceding gene: 116688887

Following gene: 116688889

Centisome position: 27.83

GC content: 67.11

Gene sequence:

>450_bases
ATGAGTGGCGCGAGCGCGCGCGATGCGACGCTCCTGGCGTTCGACTACGGCGAAAAACGGATCGGCGTCGCGATCGGCAA
CGCGCTGACGCGCTCGGCCCGTGCGCTCGTCGTGATCCAGAACCTGAACCGCGAGCACCGCTTCAAGGCGGTCGGCGACC
TGCTGGCCGAATGGCGGCCGGATGCGCTCGTCGTGGGCCTGCCGATGCATCCGGACGGCACGCCGCACGATATGACGCAG
CAGGCGAAGCGTTTCGGCAACCAGCTGAACGGCCGCTTCGGGCTGCCCGTCACGTGGGTCGACGAGCGCTATTCGTCGGT
CGAGGCGGAAGCCGGGCTGCGCGAGCGCAACGTGCGCGGCCGCGCTCGCACCGACATGCTCGATGCCGAAGCCGCGCGCG
TCATTCTTCAACAGTATCTCGATCAATTGTCCGACCATGAGCACCATTGA

Upstream 100 bases:

>100_bases
CGCGCATCGTGTTCGACACGCCGGCCGAAGAGCGCTTCGAAGCTGCGCTCGGCCTGCTCGGCGTCAGTTCGTCGATGCTG
TCCGGCGAGGCAGGGCACGC

Downstream 100 bases:

>100_bases
CGCCGAGGCGCTTTACCGCGTCCTGCTCGACCAGATCCGCGCCGCGTACGGCACGGCGTTCGCCGAACCGCGCGGCCCGC
GGCTCGCCGGCATTTACAGC

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSGASARDATLLAFDYGEKRIGVAIGNALTRSARALVVIQNLNREHRFKAVGDLLAEWRPDALVVGLPMHPDGTPHDMTQ
QAKRFGNQLNGRFGLPVTWVDERYSSVEAEAGLRERNVRGRARTDMLDAEAARVILQQYLDQLSDHEHH

Sequences:

>Translated_149_residues
MSGASARDATLLAFDYGEKRIGVAIGNALTRSARALVVIQNLNREHRFKAVGDLLAEWRPDALVVGLPMHPDGTPHDMTQ
QAKRFGNQLNGRFGLPVTWVDERYSSVEAEAGLRERNVRGRARTDMLDAEAARVILQQYLDQLSDHEHH
>Mature_148_residues
SGASARDATLLAFDYGEKRIGVAIGNALTRSARALVVIQNLNREHRFKAVGDLLAEWRPDALVVGLPMHPDGTPHDMTQQ
AKRFGNQLNGRFGLPVTWVDERYSSVEAEAGLRERNVRGRARTDMLDAEAARVILQQYLDQLSDHEHH

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=134, Percent_Identity=41.7910447761194, Blast_Score=112, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 16642; Mature: 16511

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGASARDATLLAFDYGEKRIGVAIGNALTRSARALVVIQNLNREHRFKAVGDLLAEWRP
CCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCC
DALVVGLPMHPDGTPHDMTQQAKRFGNQLNGRFGLPVTWVDERYSSVEAEAGLRERNVRG
CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCHHHCCCCC
RARTDMLDAEAARVILQQYLDQLSDHEHH
CHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGASARDATLLAFDYGEKRIGVAIGNALTRSARALVVIQNLNREHRFKAVGDLLAEWRP
CCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCC
DALVVGLPMHPDGTPHDMTQQAKRFGNQLNGRFGLPVTWVDERYSSVEAEAGLRERNVRG
CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCHHHCCCCC
RARTDMLDAEAARVILQQYLDQLSDHEHH
CHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA