Click here to switch to the map view.

The map label for this gene is 116688879

Identifier: 116688879

GI number: 116688879

Start: 961838

End: 962260

Strand: Direct

Name: 116688879

Synonym: Bcen2424_0856

Alternate gene names: NA

Gene position: 961838-962260 (Clockwise)

Preceding gene: 116688878

Following gene: 116688880

Centisome position: 27.61

GC content: 68.56

Gene sequence:

>423_bases
ATGAAGACGGCGATGATGAAGGGGTTGGTGCTGACGGCGGTCGTCGCGGGCACGATGCTTGCACGAGCGCAGGGCGATGC
GCCCGTGCGCGTGCCGGTCGATGCCGATGGCGTGCAGCGCGTGACGATCGTCGGCGGCAGCTATTTCTTCCGGCCGAACC
ACGTGATCGTCCGCGCGCACGTGCCGGTCGAGCTGACCGTATCGGCCGAGCCCGGCGTGGTGCCGCACAGCTTCGAGATC
GACGCGCCGCCGCAGGCGGGCATCGCGGTGCATACCGAGCTCGGCACCACGCCGAGAACGTTTCGTTTCACGCCGCAGCA
GCCGGGCCGGTTCGCCTACTATTGCACGCACCGGCTGCTGTTTTTCCGCAGCCATCGCGAGCGCGGGATGGAAGGCGTGC
TCGATGTCGAGGCGGCGCCGTGA

Upstream 100 bases:

>100_bases
AACAGCGTCTGCGCGAACTCGCGATCGACGCATGCGGCGCGCTGGGCGGGCCGACCGACGCGTGGAAGGGATGACGTGCG
GTGCCCGCAGGGAGCAGGCG

Downstream 100 bases:

>100_bases
TCGCCGCGTTGCTGGCCGCGAGCCTGATAGGAGCGAGCATGACAGCCGATCCCGTGACCGTCGCACAGTCGCATTTCGAC
CACGTCCGCTCGTACCGCGC

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKTAMMKGLVLTAVVAGTMLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRAHVPVELTVSAEPGVVPHSFEI
DAPPQAGIAVHTELGTTPRTFRFTPQQPGRFAYYCTHRLLFFRSHRERGMEGVLDVEAAP

Sequences:

>Translated_140_residues
MKTAMMKGLVLTAVVAGTMLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRAHVPVELTVSAEPGVVPHSFEI
DAPPQAGIAVHTELGTTPRTFRFTPQQPGRFAYYCTHRLLFFRSHRERGMEGVLDVEAAP
>Mature_140_residues
MKTAMMKGLVLTAVVAGTMLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRAHVPVELTVSAEPGVVPHSFEI
DAPPQAGIAVHTELGTTPRTFRFTPQQPGRFAYYCTHRLLFFRSHRERGMEGVLDVEAAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15250; Mature: 15250

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAMMKGLVLTAVVAGTMLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRAH
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCEEEECCCEEEEEEE
VPVELTVSAEPGVVPHSFEIDAPPQAGIAVHTELGTTPRTFRFTPQQPGRFAYYCTHRLL
CCEEEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEHHHHHHH
FFRSHRERGMEGVLDVEAAP
HHHHHHHCCCCCEEEEECCC
>Mature Secondary Structure
MKTAMMKGLVLTAVVAGTMLARAQGDAPVRVPVDADGVQRVTIVGGSYFFRPNHVIVRAH
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCEEEECCCEEEEEEE
VPVELTVSAEPGVVPHSFEIDAPPQAGIAVHTELGTTPRTFRFTPQQPGRFAYYCTHRLL
CCEEEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEHHHHHHH
FFRSHRERGMEGVLDVEAAP
HHHHHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA