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The map label for this gene is dadA [H]

Identifier: 116688873

GI number: 116688873

Start: 955573

End: 956817

Strand: Direct

Name: dadA [H]

Synonym: Bcen2424_0850

Alternate gene names: 116688873

Gene position: 955573-956817 (Clockwise)

Preceding gene: 116688872

Following gene: 116688874

Centisome position: 27.43

GC content: 72.69

Gene sequence:

>1245_bases
ATGGATTTCGACGTCATCGTTCTGGGGGCCGGCATCGTCGGCGTGTCGTCGGCGCTGCATCTGCAGGATCGCGGGCTGCG
CGTCGCGCTCGTCGACCGGCGCGCGCCCGGCGAGGAAACCAGCCACGGCAATGCCGGGTTGATCGAGCGCTCGTCGGTCG
TGCCGTATGCGTTTCCGCGCCGGCTCGGCACGCTGCTGCGCTATGCGCGCAACCGCTCGGTCGATCTTTATTGGGACTAC
CGCGCGCTGCCCGCGTATGCAGGCTGGCTCGCGCGCTTCTGGCGCGAATCGTCGCCGCGGCGGCTCGCGGCCGCCGCGCG
CGACCTGCTGCCGCTCGTCGCGGCGAGCGTCGTCGAGCACGATGTGCTGCTCGCGCGCACCGACGCGCAGCCGCTCGTGC
ACGACGGCGGCTGGATCGAGGCGTTCCGTTCGCCCGCGCTGTTCGATGCGGAAGCGCGCGCGCAGCAGCGCGTGGCCGCC
GCGCACGGGCTGCGGATGACCGTGCTCGACGCGCGTGCGCTGCGTGCGCGCGAGCCCGGTATCGGCGACGCGTTCTGCGG
CGCGTTTCACTGGCAGGACCCGAAGACCGTGTCGAGCCCGGGCGGCCTGACCAAGGCCTATGCGCGGCTGTTCGAGTGCG
ACGGCGGCACGTTCGTGCGCGGCGACGCGACGACGCTCGTGCAGGTCGACGACGGCTGGCAGGTCCGGACCGAACACGGG
CCGATCGCGGCGCGCTCGGCCGTGGTCGCGCTCGGGCCGTGGTCCGATCAGGTGTTCGCGCCGCTCGGCTACCGGATTCC
GCTGCGCGCGAAGCGCGGGTATCACATGCACTACCGGCCGACGCGCACGCCGTTGAACGTGCCCGTGTGCGATACCGAGG
CAGGCTTCGTCGTCGCGCCGATGGAGGGCGGCCGCCTGCGGCTCACGACGGGCGTCGAGATCGCGCTGCCCGACGCGCCG
CCGACCGGCGTGCAGCTCGCGCGCGCCGAACCGCTGGCGCGTGACGCGTTCGGCATCGGCGAGCGGCTCGACCCGGAGCC
GTGGCTCGGGATGCGGCCGTGCACGCCCGACATGCGCCCGGTGATCGGGCCCGCGCCGCGCCACCGTCATCTATGGTTCG
CGTTCGGCCATTGCCATCACGGGCTCACGCTCGGGCCCGCGACTGGCCGCCTGCTCGCCGAAATGATGACGGGTGCGCCG
ACTTATATCGATCCTCATCCGTACCGGCCTGCCCGCTTCGGCTGA

Upstream 100 bases:

>100_bases
GAAGTATTTCAAGCGCGACATCATTGCGAAGTAAGCGCCGCCGCGTGCCGGCCGCGGGGCCGGCGCACCGCGCATCCATC
TCGACACAGGGCGGGGAAGC

Downstream 100 bases:

>100_bases
CCGTGCGGCGCGCAGATGCGGTTTCAGCCGCCGGCACGCGCCGGCGGCAATGCGCTTGCTTCACAGTTTTTCATTCTGCT
GTCCGGCTTATCGAAATCAA

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPRRLGTLLRYARNRSVDLYWDY
RALPAYAGWLARFWRESSPRRLAAAARDLLPLVAASVVEHDVLLARTDAQPLVHDGGWIEAFRSPALFDAEARAQQRVAA
AHGLRMTVLDARALRAREPGIGDAFCGAFHWQDPKTVSSPGGLTKAYARLFECDGGTFVRGDATTLVQVDDGWQVRTEHG
PIAARSAVVALGPWSDQVFAPLGYRIPLRAKRGYHMHYRPTRTPLNVPVCDTEAGFVVAPMEGGRLRLTTGVEIALPDAP
PTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRPVIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAP
TYIDPHPYRPARFG

Sequences:

>Translated_414_residues
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPRRLGTLLRYARNRSVDLYWDY
RALPAYAGWLARFWRESSPRRLAAAARDLLPLVAASVVEHDVLLARTDAQPLVHDGGWIEAFRSPALFDAEARAQQRVAA
AHGLRMTVLDARALRAREPGIGDAFCGAFHWQDPKTVSSPGGLTKAYARLFECDGGTFVRGDATTLVQVDDGWQVRTEHG
PIAARSAVVALGPWSDQVFAPLGYRIPLRAKRGYHMHYRPTRTPLNVPVCDTEAGFVVAPMEGGRLRLTTGVEIALPDAP
PTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRPVIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAP
TYIDPHPYRPARFG
>Mature_414_residues
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPRRLGTLLRYARNRSVDLYWDY
RALPAYAGWLARFWRESSPRRLAAAARDLLPLVAASVVEHDVLLARTDAQPLVHDGGWIEAFRSPALFDAEARAQQRVAA
AHGLRMTVLDARALRAREPGIGDAFCGAFHWQDPKTVSSPGGLTKAYARLFECDGGTFVRGDATTLVQVDDGWQVRTEHG
PIAARSAVVALGPWSDQVFAPLGYRIPLRAKRGYHMHYRPTRTPLNVPVCDTEAGFVVAPMEGGRLRLTTGVEIALPDAP
PTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRPVIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAP
TYIDPHPYRPARFG

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=420, Percent_Identity=25.2380952380952, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45303; Mature: 45303

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPR
CCCEEEEEECCHHHHCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHH
RLGTLLRYARNRSVDLYWDYRALPAYAGWLARFWRESSPRRLAAAARDLLPLVAASVVEH
HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
DVLLARTDAQPLVHDGGWIEAFRSPALFDAEARAQQRVAAAHGLRMTVLDARALRAREPG
CEEEEECCCCCEEECCCHHHHHCCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCC
IGDAFCGAFHWQDPKTVSSPGGLTKAYARLFECDGGTFVRGDATTLVQVDDGWQVRTEHG
CCCHHHCCEECCCCCCCCCCCCHHHHHHHHEECCCCEEEECCCEEEEEECCCEEEEECCC
PIAARSAVVALGPWSDQVFAPLGYRIPLRAKRGYHMHYRPTRTPLNVPVCDTEAGFVVAP
CEEECCEEEEECCCCCCEECCCCCEEEEECCCCCEEEECCCCCCCCCEEECCCCCEEEEE
MEGGRLRLTTGVEIALPDAPPTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRP
CCCCEEEEEECEEEEECCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAPTYIDPHPYRPARFG
CCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPR
CCCEEEEEECCHHHHCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHH
RLGTLLRYARNRSVDLYWDYRALPAYAGWLARFWRESSPRRLAAAARDLLPLVAASVVEH
HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
DVLLARTDAQPLVHDGGWIEAFRSPALFDAEARAQQRVAAAHGLRMTVLDARALRAREPG
CEEEEECCCCCEEECCCHHHHHCCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCC
IGDAFCGAFHWQDPKTVSSPGGLTKAYARLFECDGGTFVRGDATTLVQVDDGWQVRTEHG
CCCHHHCCEECCCCCCCCCCCCHHHHHHHHEECCCCEEEECCCEEEEEECCCEEEEECCC
PIAARSAVVALGPWSDQVFAPLGYRIPLRAKRGYHMHYRPTRTPLNVPVCDTEAGFVVAP
CEEECCEEEEECCCCCCEECCCCCEEEEECCCCCEEEECCCCCCCCCEEECCCCCEEEEE
MEGGRLRLTTGVEIALPDAPPTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRP
CCCCEEEEEECEEEEECCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAPTYIDPHPYRPARFG
CCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]