| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116688869
Identifier: 116688869
GI number: 116688869
Start: 951669
End: 952400
Strand: Reverse
Name: 116688869
Synonym: Bcen2424_0846
Alternate gene names: NA
Gene position: 952400-951669 (Counterclockwise)
Preceding gene: 116688870
Following gene: 116688868
Centisome position: 27.34
GC content: 72.68
Gene sequence:
>732_bases ATGACGACCGCTCCCACTCCGACCGCCCGCCCGACCCTGACCGTCGAAATCTGGTCCGACCTGATCTGCCCGTGGTGCTG GATCGGCAAGCGCCGCTTCGACGAGGCGCTGGCCGCGTTCGCGCACGCCGACCGCGTCGACGTCGCGCTGCGCGCGTACC GGCTGATGCCCGGCCAGCCCGTCGAGCCGGTCGAGGCGATGCTGGCGGGCAAATATCGGATGTCGCCCGCGCAGGTCGAC CAGATGCTGCGCCAGGTGACCGATGCAGCGGCGAGCGTCGGGCTGCACTACGACCTGCCCGGCACGCTGGTCGGCGACAC GCTCGACGGCCACCGGCTCGTGAAGCTCGCGGAAGCCACGGGCCGCGCGCACGCGCTGACCGAGCGACTCTATCGCGCGT ACTTCTGCGAACACGGCTCGCTGTTCGATCATGCCGCGCTGACCGAATTCGCGGTCGAAGCCGGGCTCGAGCGCGCGGCC GTCGAAGCGGTGCTGCGCAGCGATGCGTACCGCGACGAAGTCGAAGCCGACATCGCGCGCGCCGCGCAGATCGGCGGGCG CGGCGTGCCGCTGTTCGTGTTCGGCGGCCGCTACGCGGTGTCGGGCGCGCAGCCGGCCGACGCGTTCGCGCAGGCGCTCG ACCAGGCGTGGCGCGACGGCATCGTCGCGCTCGACAGCAGCGACGCGGCCGCCTGCGGCCCGGACGGCTGCGAATTGCCG GCGCGCTCGTAA
Upstream 100 bases:
>100_bases AGGGCGTGCCCCGGATTCGCCCGGGCCTGCGGACGACGGAGCTTGGAAGCATAAAGTGATATAGTCGCAGTTACACTTTT TTTACCGCCCCGTATCGCCC
Downstream 100 bases:
>100_bases CGCGCATCGGGGCCACGCGCGCCACTACGCGACGCTCCTGCCACAAACCGGCAGGAAGCCCGCGCCGGCGACCTCTACAA TGCATCCTTCAAATAACGAT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Dithiol-Disulfide Isomerase; Dsba Oxidoreductase; FrnE Protein; Protein Dithiol-Disulfide Isomerase; Protein-Disulfide Isomerase; Polyketide Biosynthesis Associated Protein; Polyketide Synthase; DSBA-Like Thioredoxin Domain-Containing Protein; Thiol Oxidoreductase FrnE; Oxidoreductase; DsbA Oxidoreductase; Thioredoxin Domain Protein DsbA Family; Dsb Family Thioredoxin Protein; Protein Disulfide-Isomerase; Protein Disulfide Isomerase; Isomerase; DSBA-Like Thioredoxin Family Protein; Peptidoglycan Hydrolase; Dsba Oxidoreductase Family Protein; 2-Hydroxychromene-2-Carboxylateisomerase Family Protein; DSBA-Like Thioredoxin Domain; Dithiol-Disulfide Isomerase Protein; Protein-Disulfide Isomerase DsbC/DsbG; Thiol Oxidoreductase; Thioredoxin Domain-Containing Protein; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Polyketide Biosynthesis Dithiol-Disulfide Isomerase; Disulfide Isomerase; DsbA Family Oxidoreductase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTTAPTPTARPTLTVEIWSDLICPWCWIGKRRFDEALAAFAHADRVDVALRAYRLMPGQPVEPVEAMLAGKYRMSPAQVD QMLRQVTDAAASVGLHYDLPGTLVGDTLDGHRLVKLAEATGRAHALTERLYRAYFCEHGSLFDHAALTEFAVEAGLERAA VEAVLRSDAYRDEVEADIARAAQIGGRGVPLFVFGGRYAVSGAQPADAFAQALDQAWRDGIVALDSSDAAACGPDGCELP ARS
Sequences:
>Translated_243_residues MTTAPTPTARPTLTVEIWSDLICPWCWIGKRRFDEALAAFAHADRVDVALRAYRLMPGQPVEPVEAMLAGKYRMSPAQVD QMLRQVTDAAASVGLHYDLPGTLVGDTLDGHRLVKLAEATGRAHALTERLYRAYFCEHGSLFDHAALTEFAVEAGLERAA VEAVLRSDAYRDEVEADIARAAQIGGRGVPLFVFGGRYAVSGAQPADAFAQALDQAWRDGIVALDSSDAAACGPDGCELP ARS >Mature_242_residues TTAPTPTARPTLTVEIWSDLICPWCWIGKRRFDEALAAFAHADRVDVALRAYRLMPGQPVEPVEAMLAGKYRMSPAQVDQ MLRQVTDAAASVGLHYDLPGTLVGDTLDGHRLVKLAEATGRAHALTERLYRAYFCEHGSLFDHAALTEFAVEAGLERAAV EAVLRSDAYRDEVEADIARAAQIGGRGVPLFVFGGRYAVSGAQPADAFAQALDQAWRDGIVALDSSDAAACGPDGCELPA RS
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26142; Mature: 26011
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPTPTARPTLTVEIWSDLICPWCWIGKRRFDEALAAFAHADRVDVALRAYRLMPGQP CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VEPVEAMLAGKYRMSPAQVDQMLRQVTDAAASVGLHYDLPGTLVGDTLDGHRLVKLAEAT CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCEECCCCCCHHHHHHHHHC GRAHALTERLYRAYFCEHGSLFDHAALTEFAVEAGLERAAVEAVLRSDAYRDEVEADIAR CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQIGGRGVPLFVFGGRYAVSGAQPADAFAQALDQAWRDGIVALDSSDAAACGPDGCELP HHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC ARS CCC >Mature Secondary Structure TTAPTPTARPTLTVEIWSDLICPWCWIGKRRFDEALAAFAHADRVDVALRAYRLMPGQP CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VEPVEAMLAGKYRMSPAQVDQMLRQVTDAAASVGLHYDLPGTLVGDTLDGHRLVKLAEAT CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCEECCCCCCHHHHHHHHHC GRAHALTERLYRAYFCEHGSLFDHAALTEFAVEAGLERAAVEAVLRSDAYRDEVEADIAR CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAQIGGRGVPLFVFGGRYAVSGAQPADAFAQALDQAWRDGIVALDSSDAAACGPDGCELP HHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC ARS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA