| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688866
Identifier: 116688866
GI number: 116688866
Start: 948468
End: 948905
Strand: Direct
Name: 116688866
Synonym: Bcen2424_0843
Alternate gene names: NA
Gene position: 948468-948905 (Clockwise)
Preceding gene: 116688865
Following gene: 116688872
Centisome position: 27.22
GC content: 60.05
Gene sequence:
>438_bases ATGTCACGTCCGACCGAATACGAAAACCTTATCAAGACGAGAGCCTTCGATGCGGTTGCGCCGACACCCGGGGCAATCGC GGGCTTCCTGCGCAATGCGGAGGACTACAAGGCCACTGCCGACGAACTGGATCCCGCCCGGCATTTGCAGGTATTTACCT TGGCCTACGAAGGCTACTTCCAGGTCGTACAGGCTGTTCTGGAGTTCTACGAGGTGAGGACCAAAGATGCCGGCCGCAAC CTGGCTATCCAGCGCGTCTCCACCTCGTTGGGTGTGAGCGCCCCGGAATTCGCCTTCATCACGAAGGCACACGAGCGACG CAACGGCACGTCGTACGTTTCGCCGTTTCCGCCGGTGTCGAAAGCCGAGGCCGCAACCATGCTGGGCATCCTGGCGAAAT ACTTGCCTGTTGCACGTGCCCTGACCGGTATGTCGTGA
Upstream 100 bases:
>100_bases TCAACTTCTCGTTGTACGAACCTGCCGAATGGGCCGCGCTGGTCGATAGCGATCCCGTCATCGCGCAGATCGCCCAGGGA CCGACTTTGAGGATTTTGTG
Downstream 100 bases:
>100_bases AACCCGCTTGGCCGTCCGTCAAGACAGGCGACAGGTGGTTTGGGGGCACGCACTGAGGCGGCGTATTTCGGCAGGCGAGA GGCCGCTTACGCCAGCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSRPTEYENLIKTRAFDAVAPTPGAIAGFLRNAEDYKATADELDPARHLQVFTLAYEGYFQVVQAVLEFYEVRTKDAGRN LAIQRVSTSLGVSAPEFAFITKAHERRNGTSYVSPFPPVSKAEAATMLGILAKYLPVARALTGMS
Sequences:
>Translated_145_residues MSRPTEYENLIKTRAFDAVAPTPGAIAGFLRNAEDYKATADELDPARHLQVFTLAYEGYFQVVQAVLEFYEVRTKDAGRN LAIQRVSTSLGVSAPEFAFITKAHERRNGTSYVSPFPPVSKAEAATMLGILAKYLPVARALTGMS >Mature_144_residues SRPTEYENLIKTRAFDAVAPTPGAIAGFLRNAEDYKATADELDPARHLQVFTLAYEGYFQVVQAVLEFYEVRTKDAGRNL AIQRVSTSLGVSAPEFAFITKAHERRNGTSYVSPFPPVSKAEAATMLGILAKYLPVARALTGMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15889; Mature: 15758
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPTEYENLIKTRAFDAVAPTPGAIAGFLRNAEDYKATADELDPARHLQVFTLAYEGYF CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCHHHCCHHHHHHHHHHHHHHHH QVVQAVLEFYEVRTKDAGRNLAIQRVSTSLGVSAPEFAFITKAHERRNGTSYVSPFPPVS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC KAEAATMLGILAKYLPVARALTGMS HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRPTEYENLIKTRAFDAVAPTPGAIAGFLRNAEDYKATADELDPARHLQVFTLAYEGYF CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCHHHCCHHHHHHHHHHHHHHHH QVVQAVLEFYEVRTKDAGRNLAIQRVSTSLGVSAPEFAFITKAHERRNGTSYVSPFPPVS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC KAEAATMLGILAKYLPVARALTGMS HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA