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The map label for this gene is kpsC [H]

Identifier: 116688792

GI number: 116688792

Start: 861593

End: 863530

Strand: Reverse

Name: kpsC [H]

Synonym: Bcen2424_0769

Alternate gene names: 116688792

Gene position: 863530-861593 (Counterclockwise)

Preceding gene: 116688793

Following gene: 116688791

Centisome position: 24.79

GC content: 60.68

Gene sequence:

>1938_bases
TTGCGCATCATGAACGTATCGACACGCCGACGGCGGCTTGCCTACTCGCCCCTTCACTGGGCAATTGCGCCAGCACGAAC
GACAGTTTGGCCAGGGCCGCTCGCCGCTCGCCCATCCACTTCCGCAGCGTTGCTTTCTTGGTTTGAAGCACCCGCCGGGA
TCCCGCCATCGAACGCGCTGATTAGTTCCGTCGACGGAATGCTCCGCTCGGAAACGCGACTCGGTGAATCGGAACGGATC
GCAGCCCTGATGTCTCGCGTACTCGAGAGCGACGCGCTACACCTGCGCATGCGAATCGCTCCGTTGCCAAGCGCGCTGGC
TGTCGCAGACAGAAAACACATCGTCATCATCGACGAACGGACCCGCTCCGAAATTGACGCGGGCGTACCTGCGCGCGAAA
GGTTTCGTCAGTTCTCCGCAATGCTCCAACATCTCGCAGAATTTCGGTCAGACGCGCAGATCTGGATTCTGCGTAGTAAC
GATCCTGGAAGAGGCGCGTGGCTGTCTAAACGAGTACGATTGCCCCATAACGTGCAGCGCCTCTCCGGTGCGAGCTCACT
TCGCGAAATCCTTCGACACGTCACCGAAATGTATACGGTTGCCGCGTCTGAAGGCATGGCTGCATTGCTCACCGGCATAC
CCGTCTATGTGTTCGGCGCCCCCTATTACGCAGGCTGGGGACTCACAACCGATGCGCAGCCACTGACCGACCGTCACGCG
CGCCCCACAGTCGCCGCCCTGTTCGAAGCGGTCTTTTGCCGCTCGGCCCGCTACCTCGACCTCGAGACATATACAGTTGG
CACAATCGACGCCCTTCTCGACGCCGTCGAAGTACAGCATGCGGTTGCGCACCGTTTCGCCGATCTGCAGCGCGTTGCCG
GCATCCAATTTCAATGGTGGAAGCGCCCTTTTGCAACGCCGTATTTGAATGCTGGTGGAGGTCGCCTGCGCTGGAGTACA
CATCCTGTCAAGGTTCGCACCGACGAACATGCGGCTTTATGGGGCGCACGCGACGCGACAGCACTGCCTTCCACTGCACA
GCGGCTGAGGATAGAGGACGGCTTCATCCATTCCTCTGGCCTGGGCTCCGACATGTCTGCACCACGCAGTCAGGTCATCG
ATCGGCGCGGACTCTATTTCGACGCCAGCGCGCCCAGCGATCTATCGACACTGCTCAACACAATAGATTTCCCCCCAGCG
GAGCTAGCACGCGCCGCGGCACTACGAAGCCGGATCGTCGCGGCCGGCATCACCAAATACAACCTCGGGCGCAAAGCGCC
TACCTGGCTGGCGCCCGTCAATCAAAAGGTCGTGCTTGTTGTTGGTCAAGTCGCCGATGACGCATCAATCCGGCTCGGCA
CGCGCGGCATCGACAACCTCGACGCACTGCTGCGCCGCGTACGCGAGCGTCTCCCCGACGCATTCATCGTGTATAAGCCC
CATCCGGATGTGCTGTCCGGAAACCGGAACGGCCTCATCAACGCAGCCCAGTTGGCAAACATCGTCGATTCCGAGTCGGA
CATGATCTCGCTGATCGAGGCTGTCGATGAAGTACACACACTCTCGTCCCTCGCGGGATTCGACGCGTTGCTGCGCGGCA
AGAACGTCAGCACCTACGGGCTACCGTTTTATGCTGGCTGGGGCCTGACCGACGACGACCTCGCGCCACTTCCGTGGCGA
GAGCGCACGTTGTCGCTCGACATGCTGGTAGCGGGCACTCTATTGCGCTATCCGCTTTACTGGGACTGGCAACTCCAACT
CTTCACAACCCCGGAAGCAGTCGTTGGTCAGTTGTCGGAGGCCGCTGCACGTCCGTTGAAAACCGTCGCTCAAGACCGCT
TGCGCCCATACGTGAAAGCATTGCGCTGGACGCGCAATGTCGTGCGCCATCTCGTTTGGCGTTACCGGCAGAACTCGGCA
GACCGCGATCAGGCGTAG

Upstream 100 bases:

>100_bases
TTCCGCGAACCAACGTGGTCCGATCACTTCGACCGAGTCGACGCGTTCCTTGAGTCACTCGCTTGACTCGAACAAGAATG
TCCCGTCACGAGCCACCACG

Downstream 100 bases:

>100_bases
CCGCACAAGGGTCTGCCCAAGTGCGGTCCCGTACGTAGTTGTTACGAGTGACACGACCACATCCAGTTGCCCCGCTCTCG
CAAGTCGCGGTATAAGAACC

Product: capsule polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MRIMNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNALISSVDGMLRSETRLGESERI
AALMSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDERTRSEIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSN
DPGRGAWLSKRVRLPHNVQRLSGASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHA
RPTVAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWWKRPFATPYLNAGGGRLRWST
HPVKVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSGLGSDMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPA
ELARAAALRSRIVAAGITKYNLGRKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKP
HPDVLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYGLPFYAGWGLTDDDLAPLPWR
ERTLSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSEAAARPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSA
DRDQA

Sequences:

>Translated_645_residues
MRIMNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNALISSVDGMLRSETRLGESERI
AALMSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDERTRSEIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSN
DPGRGAWLSKRVRLPHNVQRLSGASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHA
RPTVAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWWKRPFATPYLNAGGGRLRWST
HPVKVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSGLGSDMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPA
ELARAAALRSRIVAAGITKYNLGRKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKP
HPDVLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYGLPFYAGWGLTDDDLAPLPWR
ERTLSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSEAAARPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSA
DRDQA
>Mature_645_residues
MRIMNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNALISSVDGMLRSETRLGESERI
AALMSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDERTRSEIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSN
DPGRGAWLSKRVRLPHNVQRLSGASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHA
RPTVAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWWKRPFATPYLNAGGGRLRWST
HPVKVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSGLGSDMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPA
ELARAAALRSRIVAAGITKYNLGRKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKP
HPDVLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYGLPFYAGWGLTDDDLAPLPWR
ERTLSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSEAAARPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSA
DRDQA

Specific function: Unknown

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti lipopolysaccharide processing protein lpsZ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 71631; Mature: 71631

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIMNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNAL
CEECCCCHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH
ISSVDGMLRSETRLGESERIAALMSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDER
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCEEEEEECC
TRSEIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSNDPGRGAWLSKRVRLPHNVQR
CHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCHHHH
LSGASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHA
HCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC
RPTVAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWW
CCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
KRPFATPYLNAGGGRLRWSTHPVKVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSG
CCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCCCCCCHHHHEECCCCEEECCC
LGSDMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPAELARAAALRSRIVAAGITKY
CCCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
NLGRKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKP
CCCCCCCCEECCCCCEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECC
HPDVLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYG
CCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
LPFYAGWGLTDDDLAPLPWRERTLSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSE
CCEEECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHH
AAARPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSADRDQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRIMNVSTRRRRLAYSPLHWAIAPARTTVWPGPLAARPSTSAALLSWFEAPAGIPPSNAL
CEECCCCHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH
ISSVDGMLRSETRLGESERIAALMSRVLESDALHLRMRIAPLPSALAVADRKHIVIIDER
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCEEEEEECC
TRSEIDAGVPARERFRQFSAMLQHLAEFRSDAQIWILRSNDPGRGAWLSKRVRLPHNVQR
CHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCHHHH
LSGASSLREILRHVTEMYTVAASEGMAALLTGIPVYVFGAPYYAGWGLTTDAQPLTDRHA
HCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC
RPTVAALFEAVFCRSARYLDLETYTVGTIDALLDAVEVQHAVAHRFADLQRVAGIQFQWW
CCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
KRPFATPYLNAGGGRLRWSTHPVKVRTDEHAALWGARDATALPSTAQRLRIEDGFIHSSG
CCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCCCCCCHHHHEECCCCEEECCC
LGSDMSAPRSQVIDRRGLYFDASAPSDLSTLLNTIDFPPAELARAAALRSRIVAAGITKY
CCCCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
NLGRKAPTWLAPVNQKVVLVVGQVADDASIRLGTRGIDNLDALLRRVRERLPDAFIVYKP
CCCCCCCCEECCCCCEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECC
HPDVLSGNRNGLINAAQLANIVDSESDMISLIEAVDEVHTLSSLAGFDALLRGKNVSTYG
CCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC
LPFYAGWGLTDDDLAPLPWRERTLSLDMLVAGTLLRYPLYWDWQLQLFTTPEAVVGQLSE
CCEEECCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHH
AAARPLKTVAQDRLRPYVKALRWTRNVVRHLVWRYRQNSADRDQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 7875563 [H]