Click here to switch to the map view.

The map label for this gene is ymbA [C]

Identifier: 116688733

GI number: 116688733

Start: 790533

End: 791249

Strand: Reverse

Name: ymbA [C]

Synonym: Bcen2424_0710

Alternate gene names: 116688733

Gene position: 791249-790533 (Counterclockwise)

Preceding gene: 116688734

Following gene: 116688732

Centisome position: 22.71

GC content: 76.15

Gene sequence:

>717_bases
ATGACGACACGCGTGAACGGTTTCGCGAGCGGCGCGGCGGCGGCGCTCGCCGCACTCGCGCTCGCCGCGTGCAGCTCGCC
GCCCGCACGGTTCTACACGCTCAGCCCGGCCGACGCCGCGGCGCCGCTGCGCACCGCGCCGGCCAACCCGGCGTTCCTGA
TCGAGGTGCCATCGGTCGGCGTGCCCGAGCAGGTCGCGAAGAGCCAGCTGGTCGTGCAGAAGAACGCCGCGCAGGTCGAC
GTGCTCGAGCAGGAACGCTGGGCGTCGCCGCCCGCCGACGAGATCCGCCGCGCGCTGTCGGACGATCTCGCCGCGCAGCT
CGGCACGATCGACGTCGCGAATTCCGCGTATCCGGCCGGCGTGCCCGTGTACCGCATCAGCGTGAACGTGCAGCGCTTCG
AATCGTGGCCGGGCAAGCGCGCCGCGGTCGACGCCGTCTGGAGCGTGCGCTCGCTCGCCACGCAGGCCGTGATGACCTGC
CGCACGAGCGTCGCGGAACCGGTCGCCGACGGCTACGACGCGCTCGTCGCCGGCCACCGGCGCGCGCTCGACGTGATTGC
CACGCAGGCCGCGGCCGGCGTGCGCGCGATGGCCGCCCGCCGCGGCGCGCCGGCGCCCGCTGCCGGCGGCAAGACGGCCG
CCGCGCCGGTCGTGCCGTGCCCGGCCAACCCGGCGTCCGGCGGCGACGCCGGCGCGACGGGCAAGTCCGGCGTCTAA

Upstream 100 bases:

>100_bases
TGAAGGAGCTCACGCGCACGCTGCAATCGCTGAACGCGCTCGCCGACTATCTGGAGCGCCACCCCGAATCGCTGCTCAAG
GGCAAGCCAGGAGATAAACA

Downstream 100 bases:

>100_bases
GCGAACGCGGACGGCGCGCGGGCGAACGTTCGACACGACGTTCGCCCGCGCGGTGTGGAATGGCGCGGTGCGGCCGGCAG
CACGCGCGCCCGTCGTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTTRVNGFASGAAAALAALALAACSSPPARFYTLSPADAAAPLRTAPANPAFLIEVPSVGVPEQVAKSQLVVQKNAAQVD
VLEQERWASPPADEIRRALSDDLAAQLGTIDVANSAYPAGVPVYRISVNVQRFESWPGKRAAVDAVWSVRSLATQAVMTC
RTSVAEPVADGYDALVAGHRRALDVIATQAAAGVRAMAARRGAPAPAAGGKTAAAPVVPCPANPASGGDAGATGKSGV

Sequences:

>Translated_238_residues
MTTRVNGFASGAAAALAALALAACSSPPARFYTLSPADAAAPLRTAPANPAFLIEVPSVGVPEQVAKSQLVVQKNAAQVD
VLEQERWASPPADEIRRALSDDLAAQLGTIDVANSAYPAGVPVYRISVNVQRFESWPGKRAAVDAVWSVRSLATQAVMTC
RTSVAEPVADGYDALVAGHRRALDVIATQAAAGVRAMAARRGAPAPAAGGKTAAAPVVPCPANPASGGDAGATGKSGV
>Mature_237_residues
TTRVNGFASGAAAALAALALAACSSPPARFYTLSPADAAAPLRTAPANPAFLIEVPSVGVPEQVAKSQLVVQKNAAQVDV
LEQERWASPPADEIRRALSDDLAAQLGTIDVANSAYPAGVPVYRISVNVQRFESWPGKRAAVDAVWSVRSLATQAVMTCR
TSVAEPVADGYDALVAGHRRALDVIATQAAAGVRAMAARRGAPAPAAGGKTAAAPVVPCPANPASGGDAGATGKSGV

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24002; Mature: 23871

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRVNGFASGAAAALAALALAACSSPPARFYTLSPADAAAPLRTAPANPAFLIEVPSVG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCC
VPEQVAKSQLVVQKNAAQVDVLEQERWASPPADEIRRALSDDLAAQLGTIDVANSAYPAG
CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCC
VPVYRISVNVQRFESWPGKRAAVDAVWSVRSLATQAVMTCRTSVAEPVADGYDALVAGHR
CEEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RALDVIATQAAAGVRAMAARRGAPAPAAGGKTAAAPVVPCPANPASGGDAGATGKSGV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTRVNGFASGAAAALAALALAACSSPPARFYTLSPADAAAPLRTAPANPAFLIEVPSVG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCC
VPEQVAKSQLVVQKNAAQVDVLEQERWASPPADEIRRALSDDLAAQLGTIDVANSAYPAG
CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCC
VPVYRISVNVQRFESWPGKRAAVDAVWSVRSLATQAVMTCRTSVAEPVADGYDALVAGHR
CEEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RALDVIATQAAAGVRAMAARRGAPAPAAGGKTAAAPVVPCPANPASGGDAGATGKSGV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA