| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is gltK [H]
Identifier: 116688694
GI number: 116688694
Start: 747021
End: 747701
Strand: Direct
Name: gltK [H]
Synonym: Bcen2424_0671
Alternate gene names: 116688694
Gene position: 747021-747701 (Clockwise)
Preceding gene: 116688693
Following gene: 116688695
Centisome position: 21.44
GC content: 63.88
Gene sequence:
>681_bases GTGATGCATCAGTTCGACTGGAGTAGTATTCCCGGCGCGCTGCCGACGCTGTGGTCGGGGGCGGTCGTCACGTTCAAGAT CACGCTGATCGCGATCGTGATCGGGATCGTCTGGGGCACGCTGCTGGCGCTGCTGCGGCTGTCCGGCGTGAAGCCGCTCG CATGGTTCGCGAAAGCGTACGTGACGGTGTTCCGCTCGATCCCGCTCGTGATGGTGCTGCTGTGGTTCTTCCTGATCGTG CCGCAGTTGCTGCAGGGCGTGCTCGGGCTGTCGCCGACGATCGACATCCGCCTCGCGTCGGCCATGGTCGCGTTCTCGTT GTTCGAAGCCGCGTATTATTCCGAGATCATCCGCGCCGGCATCCAGGCGGTGCCGCGCGGGCAGGTGAACGCCGCGTTCG CGCTCGGCATGAACTACGCGCAGGCGATGCGCCTCGTGATCCTGCCGCAGGCCTTCCGTGCGATGGTGCCGCTGCTGCTC ACGCAGGCGATCGTCCTGTTCCAGGATACGTCGCTCGTGTACGTGATCAGTCTCGCGGACTTCTTCCGCACGGCCGCCAA CGTCGGCGATCGCGACGGCACGACCGTCGAGATGGTCCTGTTCGCCGGCGCATGCTATTTCGTGATTTGCTCGTTGGCGT CTGCTCTCGTCAAGGGTCTCCAGAAAAAGGTCACAAGATGA
Upstream 100 bases:
>100_bases TCGCGGTCACGCTCGCCTACGTGCTGATCAACCTCGTCGTGATGGCGTTCATGCGCTGGATCGAAGGCCGCACGCGGCTG CCCGGCTATATCGGAGGCAA
Downstream 100 bases:
>100_bases TTTCCATCAAGAACGTTTCGAAGTGGTACGGCCAGTTTCAGGTCCTCACCGAATGCACGACCGAGGTCAAGAAAGGCGAA GTGGTCGTCGTGTGCGGCCC
Product: polar amino acid ABC transporter, inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MMHQFDWSSIPGALPTLWSGAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLIV PQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLL TQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR
Sequences:
>Translated_226_residues MMHQFDWSSIPGALPTLWSGAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLIV PQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLL TQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR >Mature_226_residues MMHQFDWSSIPGALPTLWSGAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLIV PQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLL TQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=72.0720720720721, Blast_Score=322, Evalue=9e-90, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=35.0467289719626, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI87082239, Length=210, Percent_Identity=33.8095238095238, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1786874, Length=214, Percent_Identity=31.3084112149533, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=28.6343612334802, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1787030, Length=225, Percent_Identity=28.8888888888889, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=25.3456221198157, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI48994930, Length=129, Percent_Identity=34.1085271317829, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788646, Length=209, Percent_Identity=24.4019138755981, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=24.2990654205607, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24664; Mature: 24664
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHQFDWSSIPGALPTLWSGAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAY CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VTVFRSIPLVMVLLWFFLIVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLAD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FFRTAANVGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMHQFDWSSIPGALPTLWSGAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAY CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VTVFRSIPLVMVLLWFFLIVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLAD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FFRTAANVGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]