| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is gntK [H]
Identifier: 116688686
GI number: 116688686
Start: 737833
End: 738336
Strand: Direct
Name: gntK [H]
Synonym: Bcen2424_0663
Alternate gene names: 116688686
Gene position: 737833-738336 (Clockwise)
Preceding gene: 116688685
Following gene: 116688688
Centisome position: 21.18
GC content: 62.9
Gene sequence:
>504_bases ATGATTCTGATCGCAATGGGCGTATCGGGCGCGGGCAAGTCGCTGATCGGCGAAATGCTGGCGGAACGCCTGTCGTGCAG CTATACCGATGGCGACGCGTTTCACAGCGCGGCGAACAAGGAAAAGATGCACCACGGCATTCCGCTGACCGATGAAGACC GCTGGCCGTGGCTGCGCACGATTCGTGCGGCCATCGAGGAAAAGCAGCGCGCCGGCGAAACCGCCGTGTTCACGTGCTCG TCGCTGAAGCGGTCGTACCGCGACGTGCTGCGCGGCACCGACACCGACGTGCGGTTCGTGTATCTGAAGGGTTCGTTCGA GGTGTTGCAGGAGCGTCTGAAGAGCCGCACCGGCCATTTCTTCGATCCGTCGCTGCTGAAGAGCCAGCTGGACACGCTCG AGGAACCGGGCCCGGACGAAGCGATCGAGGTCAGCATCGAGCTGACGCCCGAGCAGATCGTCGATCAGGTCATGCTGAAG ATCGGCCTCGCGCAGCAGCACTGA
Upstream 100 bases:
>100_bases CAGACGTTCAAGACCTGGTCGCTGCTTGAAACCATCATCTCGGTGCTCGGTCTGAGTTTTACGCTGTTGCTGAGCGTGGT TCTGTAACAAGGGGTAGTCA
Downstream 100 bases:
>100_bases GCGCGGTTCGCGGTCATCGTCATGAAAAAGGCGCCTTCGGGCGCCTTTTTCGTTGGCGATGCGCAAGCCGGTCAGGCCGT GCGTGCGCGTTGCGCGATGC
Product: carbohydrate kinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHHGIPLTDEDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDVLRGTDTDVRFVYLKGSFEVLQERLKSRTGHFFDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLK IGLAQQH
Sequences:
>Translated_167_residues MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHHGIPLTDEDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDVLRGTDTDVRFVYLKGSFEVLQERLKSRTGHFFDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLK IGLAQQH >Mature_167_residues MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHHGIPLTDEDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDVLRGTDTDVRFVYLKGSFEVLQERLKSRTGHFFDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLK IGLAQQH
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=175, Percent_Identity=37.7142857142857, Blast_Score=130, Evalue=6e-31, Organism=Escherichia coli, GI87082265, Length=139, Percent_Identity=46.0431654676259, Blast_Score=143, Evalue=5e-36, Organism=Escherichia coli, GI1790719, Length=147, Percent_Identity=46.2585034013605, Blast_Score=139, Evalue=9e-35, Organism=Caenorhabditis elegans, GI25146487, Length=166, Percent_Identity=45.1807228915663, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6320454, Length=157, Percent_Identity=38.2165605095541, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18721; Mature: 18721
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHHGIPLTDEDRWPWLRT CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IRAAIEEKQRAGETAVFTCSSLKRSYRDVLRGTDTDVRFVYLKGSFEVLQERLKSRTGHF HHHHHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCC FDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLKIGLAQQH CCHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILIAMGVSGAGKSLIGEMLAERLSCSYTDGDAFHSAANKEKMHHGIPLTDEDRWPWLRT CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IRAAIEEKQRAGETAVFTCSSLKRSYRDVLRGTDTDVRFVYLKGSFEVLQERLKSRTGHF HHHHHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCC FDPSLLKSQLDTLEEPGPDEAIEVSIELTPEQIVDQVMLKIGLAQQH CCHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]