| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is gntP [H]
Identifier: 116688685
GI number: 116688685
Start: 736458
End: 737819
Strand: Direct
Name: gntP [H]
Synonym: Bcen2424_0662
Alternate gene names: 116688685
Gene position: 736458-737819 (Clockwise)
Preceding gene: 116688684
Following gene: 116688686
Centisome position: 21.14
GC content: 65.27
Gene sequence:
>1362_bases ATGGGGGCCGTCCAAGGCAGCATGCTGCTCGTATTCACGCTGATCGCGATTGCCGCGCTGATCCTGATGATCGCGCGCTA CAAGATCTACCCGTTCCTGGTGCTGATCATCGTCTCGCTCGGCCTCGGTCTCGTCGTCGGCATGCCGATGGACAAGATCG TCAAGTCGTTCGAGACGGGCACCGGCGGCACGCTCGGCCACATCGCGATCGTCGTCGGCCTCGGCACGATGCTCGGCAAG ATGATGGCCGAATCGGGCGGTGCCGAACGGATCGCGACCACGCTGATCGACTGGTTCGGTGAAAAGAACATCCACTGGGC GATGATGTTCGTCGCGATCATCGTCGGCCTGCCGGTGTTCTTCGAAGTCGGCTTCGTGCTGCTGATCCCGATCGCGTTCA ACGTCGCGAAGCGCACCGGCAAGTCGCTGCTCGTCGTCGGCCTGCCGATGGTGGCCGGCCTGTCGGTCGTGCACGGGCTG ATCCCGCCGCACCCGGCTGCGCTACTGGCCGTCCAGCAATACGGCGCCGATATCGGCAAGACGATCGCCTTCGGCCTGGT CGTCGGCGTGCCGACCGCGATCATCGCGGGCCCGCTGTTCGCGCTGATGATCTCGAAGTTCGTGAAGCTGCCGGAAAACA ACCCGCTCGCGTCGCAATTCGTCGATTCGCGCACGGACGGCGGCAAGCGCGAGCTGCCGAGCTTCGGCATCACGCTGTTC ACGATCCTGCTGCCCGTCGTGCTGATGCTCGTCGGCAGCTGGGCCGACCTGGTGTTCACGCCGAAGTCGCTGCCGAACAA CCTGCTGCGCTTTGCGGGCAACTCGGACGTCGCGCTGCTGATCGCCGTGCTCGTGAGCTTCTGGACCTTCGGCGCGAAGC AGGGCTTCAACCGCGACCAGATCCAGAAGTTCTGCGGCGAGTGCCTGGCGCCGATCGCCGGGATCACGCTGATCGTCGGC GCGGGCGGCGGCTTCGGCGGCGTCCTGCGCGACAGCGGGATTTCGCAGCAGATCGTCGAGACCGCGAAGCACGCGCACCT GTCGCCGCTGCTGCTCGGCTGGTTCGTCGCGGCGCTGATGCGTCTCGCGACGGGTTCGGCGACGGTCGCGATGACGACGG CCTGCGGTATCGTCGCGCCGATCGCGGCGGCGTCGGGCGCGTCGGTCCGGCCGGAACTGCTGGTGCTCGCGACGGGCTCG GGCTCGCTGATCTTCTCGCACGTGAACGACGGTGGCTTCTGGCTGATCAAGGAATATTTCGGGATGACGGTGGGCCAGAC GTTCAAGACCTGGTCGCTGCTTGAAACCATCATCTCGGTGCTCGGTCTGAGTTTTACGCTGTTGCTGAGCGTGGTTCTGT AA
Upstream 100 bases:
>100_bases GCGTCCTGACGGGGGGGTACCCCCGTGTTTCGGAGACCCGCATAGCCGGGCATACTCGCAACGACTCGCCCGGTTCGAAC AATTCTAGGAGGAGTGCCAC
Downstream 100 bases:
>100_bases CAAGGGGTAGTCAATGATTCTGATCGCAATGGGCGTATCGGGCGCGGGCAAGTCGCTGATCGGCGAAATGCTGGCGGAAC GCCTGTCGTGCAGCTATACC
Product: gluconate transporter
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MGAVQGSMLLVFTLIAIAALILMIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETGTGGTLGHIAIVVGLGTMLGK MMAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVFFEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGL IPPHPAALLAVQQYGADIGKTIAFGLVVGVPTAIIAGPLFALMISKFVKLPENNPLASQFVDSRTDGGKRELPSFGITLF TILLPVVLMLVGSWADLVFTPKSLPNNLLRFAGNSDVALLIAVLVSFWTFGAKQGFNRDQIQKFCGECLAPIAGITLIVG AGGGFGGVLRDSGISQQIVETAKHAHLSPLLLGWFVAALMRLATGSATVAMTTACGIVAPIAAASGASVRPELLVLATGS GSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWSLLETIISVLGLSFTLLLSVVL
Sequences:
>Translated_453_residues MGAVQGSMLLVFTLIAIAALILMIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETGTGGTLGHIAIVVGLGTMLGK MMAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVFFEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGL IPPHPAALLAVQQYGADIGKTIAFGLVVGVPTAIIAGPLFALMISKFVKLPENNPLASQFVDSRTDGGKRELPSFGITLF TILLPVVLMLVGSWADLVFTPKSLPNNLLRFAGNSDVALLIAVLVSFWTFGAKQGFNRDQIQKFCGECLAPIAGITLIVG AGGGFGGVLRDSGISQQIVETAKHAHLSPLLLGWFVAALMRLATGSATVAMTTACGIVAPIAAASGASVRPELLVLATGS GSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWSLLETIISVLGLSFTLLLSVVL >Mature_452_residues GAVQGSMLLVFTLIAIAALILMIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETGTGGTLGHIAIVVGLGTMLGKM MAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVFFEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGLI PPHPAALLAVQQYGADIGKTIAFGLVVGVPTAIIAGPLFALMISKFVKLPENNPLASQFVDSRTDGGKRELPSFGITLFT ILLPVVLMLVGSWADLVFTPKSLPNNLLRFAGNSDVALLIAVLVSFWTFGAKQGFNRDQIQKFCGECLAPIAGITLIVGA GGGFGGVLRDSGISQQIVETAKHAHLSPLLLGWFVAALMRLATGSATVAMTTACGIVAPIAAASGASVRPELLVLATGSG SLIFSHVNDGGFWLIKEYFGMTVGQTFKTWSLLETIISVLGLSFTLLLSVVL
Specific function: Part Of The Gluconate Utilization System Gnt-I; High- Affinity Intake Of Gluconate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=450, Percent_Identity=46.6666666666667, Blast_Score=373, Evalue=1e-104, Organism=Escherichia coli, GI1790716, Length=446, Percent_Identity=40.5829596412556, Blast_Score=342, Evalue=2e-95, Organism=Escherichia coli, GI1788707, Length=443, Percent_Identity=41.7607223476298, Blast_Score=312, Evalue=2e-86, Organism=Escherichia coli, GI2367370, Length=428, Percent_Identity=40.6542056074766, Blast_Score=307, Evalue=1e-84, Organism=Escherichia coli, GI1790776, Length=432, Percent_Identity=34.2592592592593, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI48994939, Length=426, Percent_Identity=37.793427230047, Blast_Score=257, Evalue=1e-69, Organism=Escherichia coli, GI1789097, Length=446, Percent_Identity=33.6322869955157, Blast_Score=209, Evalue=4e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 47562; Mature: 47430
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVQGSMLLVFTLIAIAALILMIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC TGGTLGHIAIVVGLGTMLGKMMAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVF CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGLIPPHPAALLAVQQYGADIGK HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH TIAFGLVVGVPTAIIAGPLFALMISKFVKLPENNPLASQFVDSRTDGGKRELPSFGITLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH TILLPVVLMLVGSWADLVFTPKSLPNNLLRFAGNSDVALLIAVLVSFWTFGAKQGFNRDQ HHHHHHHHHHHCCCHHHEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHH IQKFCGECLAPIAGITLIVGAGGGFGGVLRDSGISQQIVETAKHAHLSPLLLGWFVAALM HHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH RLATGSATVAMTTACGIVAPIAAASGASVRPELLVLATGSGSLIFSHVNDGGFWLIKEYF HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCEEHHHHHH GMTVGQTFKTWSLLETIISVLGLSFTLLLSVVL CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GAVQGSMLLVFTLIAIAALILMIARYKIYPFLVLIIVSLGLGLVVGMPMDKIVKSFETG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC TGGTLGHIAIVVGLGTMLGKMMAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVF CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGLIPPHPAALLAVQQYGADIGK HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH TIAFGLVVGVPTAIIAGPLFALMISKFVKLPENNPLASQFVDSRTDGGKRELPSFGITLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHH TILLPVVLMLVGSWADLVFTPKSLPNNLLRFAGNSDVALLIAVLVSFWTFGAKQGFNRDQ HHHHHHHHHHHCCCHHHEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHH IQKFCGECLAPIAGITLIVGAGGGFGGVLRDSGISQQIVETAKHAHLSPLLLGWFVAALM HHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH RLATGSATVAMTTACGIVAPIAAASGASVRPELLVLATGSGSLIFSHVNDGGFWLIKEYF HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCEEHHHHHH GMTVGQTFKTWSLLETIISVLGLSFTLLLSVVL CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA