| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is tkt1 [H]
Identifier: 116688661
GI number: 116688661
Start: 709890
End: 711962
Strand: Direct
Name: tkt1 [H]
Synonym: Bcen2424_0638
Alternate gene names: 116688661
Gene position: 709890-711962 (Clockwise)
Preceding gene: 116688657
Following gene: 116688662
Centisome position: 20.38
GC content: 67.25
Gene sequence:
>2073_bases ATGCCGCCGTGCCCCCGTTTCCTCGACTCGTTCTCCGGACTCGACATGACGACTTCGTCTCCCGCCTCCACCACCCTGAT GGCCAACGCGATCCGTGCGCTCGCGATGGACGCCGTCCAGCAAGCGAACTCCGGCCACCCCGGCATGCCGATGGGCATGG CCGAAATCGGCGTCGCACTCTGGTCGCGCCATCTGAAGCACAACCCGACGAACCCGCACTGGGCCGATCGCGACCGTTTC GTGCTGTCGAACGGCCATGGCTCGATGCTGCTGTACTCGCTGCTGCATCTGACCGGCTACGACCTGCCGATCGAAGAGCT GAAGAATTTCCGCCAGCTGCACTCGAAGACGCCGGGCCACCCCGAATACGGGATCACGCCGGGCGTCGAGACGACCACCG GCCCGCTCGGCCAGGGTCTCGCGAACGCGGTCGGCATGGCGCTCGGCGAAGCGCTGATGGCCGACGAGTTCAACCGTGAC GGCGCGAAGATCGTCGATCACCACACGTACGTGTTCCTCGGCGACGGCTGCCTGATGGAAGGCATCTCGCACGAAGCCTG CTCGCTCGCGGGCACGCTGAAGCTGAACAAGCTGATCGCGCTGTACGACGACAACGGCATCTCGATCGACGGCGACGTCG TGAACTGGTTCCACGACGACACGCCGAAGCGCTTCGAAGCGTACGGCTGGAACGTGATCCCGAACGTGAACGGCCACGAC GTCGACGCGGTCGACGCGGCCATCGCGAAGGCGAAGCTGTCGGACAAACCGACGCTGATCTGCTGCAAGACGGTGATCGG CAAGGGCGCGGCCACGAAGGCCGGCGGCCACGACGTGCACGGCGCGGCGCTCGGCGCGGAAGAAATCGCGAAGACGCGCG AAGCGCTCGGCTGGAAGTGGGAGCCGTTCGTGATTCCGCAGGAAGTCTATGCGGCCTGGGATGCGAAGGAAGCCGGCAAG CGTGCCGAGTCGGAGTGGGACGCGACGTTCGCCGCGTATCGCGCGAAGTTCCCGGCGGAAGCCGCCGAATTCGAGCGCCG GATGGCCAACAAGCTGCCGGCCGACTGGGCCGAGAAGGCTGCGGCGATCATCGCCGGCGCGAACGAGCGCGCCGAGACGG TCGCGACCCGCAAGGCGTCGCAGCAGGCGATCGAGGGCCTCGCCGCCGCGCTGCCGGAGCTGCTCGGCGGCTCGGCCGAC CTGACCGGCTCGAACCTGACCAACTGGAAGGCGTCGAAGGCGGTCCGCGCGAATCCGGAAGGCGCGGGCGTGCTGCTCGG CAACCACATCAACTACGGCGTGCGCGAATTCGGCATGAGCGCGGCGATCAACGGTCTCGCGCTGCACGGCGGCCACAAGC CGTTCGGCGGCACGTTCCTGACGTTCTCCGACTACAGCCGCAACGCGCTGCGCGTGGCCGCGCTGATGAAGGTGCCGTCG ATCTTCGTGTTCACGCACGATTCGATCGGCCTCGGCGAAGACGGCCCGACGCACCAGTCGATCGAGCACGTGTCGAGCCT GCGCCTGATCCCGAACCACGACGTGTGGCGTCCGGCCGACACGGTCGAGACGGCCGTCGCGTGGACCCACGCGGTCGCTG CCGACCGTCCGTCGAGTCTGATCTTCAGCCGCCAGAACCTCGCGTTCAACCCGCGTACCGATGCGCAGATCGCCAACATC GAGAAGGGCGGTTACGTGCTGAAGGACTGGGACGAGGAAATCGTCGCACGCAAGATCATCCTGATCGCGACGGGCTCGGA AGTCGAACTCGCGATGAAGGCCGTCGAGCCGCTCGCGCAGCAGGGCATCGCGGCGCGCGTCGTGTCGATGCCGTCGACCA ACGTGTTCGACCGCCAGGACGCCGAATATCGCGAACGCGTGCTGCCGCACGGCGTGCGCCGCGTCGCGATCGAAGCGGGC GTGACGAGCTTCTGGCACAAGTACGTCGGCCTCGAAGGCGGCGTCGTCGGGATCGACACGTTCGGCGAGTCGGCGCCGGC CGGCGTGCTGTTCAAGTACTTCGGCTTCACCGTCGAGCACGTCGTCGAGACGGCCAAGGCCGTGCTGGCCTAA
Upstream 100 bases:
>100_bases AAAATGACGAGCTTTGCAGCCCCGTCCGTTGGCTCCGTCCGCTTCGCGTCCGTCAGGCGCCGCACCGCGCGCCGGGAACG ATTGACGCTCGAGCTTCCGG
Downstream 100 bases:
>100_bases ATAAAAGCATACGCGGCGCGCGCCACCCGTTGCGCGCGTCGCACCGTGAAGCTGCACGAAACGAATTTTTTCAGCCATCA GGAGATAGACCATGACGATT
Product: transketolase
Products: NA
Alternate protein names: TK 1 [H]
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MPPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRF VLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRD GAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD VDAVDAAIAKAKLSDKPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTREALGWKWEPFVIPQEVYAAWDAKEAGK RAESEWDATFAAYRAKFPAEAAEFERRMANKLPADWAEKAAAIIAGANERAETVATRKASQQAIEGLAAALPELLGGSAD LTGSNLTNWKASKAVRANPEGAGVLLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPS IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAVAADRPSSLIFSRQNLAFNPRTDAQIANI EKGGYVLKDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAG VTSFWHKYVGLEGGVVGIDTFGESAPAGVLFKYFGFTVEHVVETAKAVLA
Sequences:
>Translated_690_residues MPPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRF VLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRD GAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD VDAVDAAIAKAKLSDKPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTREALGWKWEPFVIPQEVYAAWDAKEAGK RAESEWDATFAAYRAKFPAEAAEFERRMANKLPADWAEKAAAIIAGANERAETVATRKASQQAIEGLAAALPELLGGSAD LTGSNLTNWKASKAVRANPEGAGVLLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPS IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAVAADRPSSLIFSRQNLAFNPRTDAQIANI EKGGYVLKDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAG VTSFWHKYVGLEGGVVGIDTFGESAPAGVLFKYFGFTVEHVVETAKAVLA >Mature_689_residues PPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRFV LSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRDG AKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHDV DAVDAAIAKAKLSDKPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTREALGWKWEPFVIPQEVYAAWDAKEAGKR AESEWDATFAAYRAKFPAEAAEFERRMANKLPADWAEKAAAIIAGANERAETVATRKASQQAIEGLAAALPELLGGSADL TGSNLTNWKASKAVRANPEGAGVLLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPSI FVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAVAADRPSSLIFSRQNLAFNPRTDAQIANIE KGGYVLKDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAGV TSFWHKYVGLEGGVVGIDTFGESAPAGVLFKYFGFTVEHVVETAKAVLA
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=607, Percent_Identity=27.6771004942339, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI4507521, Length=607, Percent_Identity=27.6771004942339, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI133778974, Length=589, Percent_Identity=26.8251273344652, Blast_Score=137, Evalue=3e-32, Organism=Escherichia coli, GI48994911, Length=671, Percent_Identity=63.3383010432191, Blast_Score=867, Evalue=0.0, Organism=Escherichia coli, GI1788808, Length=666, Percent_Identity=60.5105105105105, Blast_Score=812, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=682, Percent_Identity=26.5395894428152, Blast_Score=162, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6325331, Length=673, Percent_Identity=49.777117384844, Blast_Score=613, Evalue=1e-176, Organism=Saccharomyces cerevisiae, GI6319593, Length=675, Percent_Identity=45.6296296296296, Blast_Score=559, Evalue=1e-160, Organism=Drosophila melanogaster, GI45551847, Length=716, Percent_Identity=25.2793296089385, Blast_Score=160, Evalue=4e-39, Organism=Drosophila melanogaster, GI45550715, Length=716, Percent_Identity=25.2793296089385, Blast_Score=160, Evalue=4e-39, Organism=Drosophila melanogaster, GI24666278, Length=675, Percent_Identity=25.4814814814815, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24645119, Length=667, Percent_Identity=25.0374812593703, Blast_Score=140, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 74201; Mature: 74069
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00801 TRANSKETOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVAL CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH WSRHLKHNPTNPHWADRDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGH HHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC PEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRDGAKIVDHHTYVFLGDGCLME CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCHHHH GISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD CCCHHHHHHHHHEEEEEEEEEECCCCCEECCCEEECCCCCCCCHHHHCCCEECCCCCCCC VDAVDAAIAKAKLSDKPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTREALGWKW CHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCC EPFVIPQEVYAAWDAKEAGKRAESEWDATFAAYRAKFPAEAAEFERRMANKLPADWAEKA CCEECHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH AAIIAGANERAETVATRKASQQAIEGLAAALPELLGGSADLTGSNLTNWKASKAVRANPE HEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC GAGVLLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPS CCEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCE IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAVAADRPSSL EEEEECCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH IFSRQNLAFNPRTDAQIANIEKGGYVLKDWDEEIVARKIILIATGSEVELAMKAVEPLAQ EEECCCCCCCCCCCCEEEEECCCCEEEECCHHHHHHCEEEEEEECCHHHHHHHHHHHHHH QGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAGVTSFWHKYVGLEGGVVGIDT CCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC FGESAPAGVLFKYFGFTVEHVVETAKAVLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPCPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVAL CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH WSRHLKHNPTNPHWADRDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGH HHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC PEYGITPGVETTTGPLGQGLANAVGMALGEALMADEFNRDGAKIVDHHTYVFLGDGCLME CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCHHHH GISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD CCCHHHHHHHHHEEEEEEEEEECCCCCEECCCEEECCCCCCCCHHHHCCCEECCCCCCCC VDAVDAAIAKAKLSDKPTLICCKTVIGKGAATKAGGHDVHGAALGAEEIAKTREALGWKW CHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCC EPFVIPQEVYAAWDAKEAGKRAESEWDATFAAYRAKFPAEAAEFERRMANKLPADWAEKA CCEECHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHH AAIIAGANERAETVATRKASQQAIEGLAAALPELLGGSADLTGSNLTNWKASKAVRANPE HEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC GAGVLLGNHINYGVREFGMSAAINGLALHGGHKPFGGTFLTFSDYSRNALRVAALMKVPS CCEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCE IFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNHDVWRPADTVETAVAWTHAVAADRPSSL EEEEECCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH IFSRQNLAFNPRTDAQIANIEKGGYVLKDWDEEIVARKIILIATGSEVELAMKAVEPLAQ EEECCCCCCCCCCCCEEEEECCCCEEEECCHHHHHHCEEEEEEECCHHHHHHHHHHHHHH QGIAARVVSMPSTNVFDRQDAEYRERVLPHGVRRVAIEAGVTSFWHKYVGLEGGVVGIDT CCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC FGESAPAGVLFKYFGFTVEHVVETAKAVLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA