| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688595
Identifier: 116688595
GI number: 116688595
Start: 644370
End: 645239
Strand: Direct
Name: 116688595
Synonym: Bcen2424_0571
Alternate gene names: NA
Gene position: 644370-645239 (Clockwise)
Preceding gene: 116688594
Following gene: 116688596
Centisome position: 18.5
GC content: 65.06
Gene sequence:
>870_bases ATGGACAAGCTTGAACAGTTTCTGACGCGCGCGGAAGCGCTGCTCGGCCGTCTCGAAGGGATGCTGCCGCCCGCACCGGC GGCCATCGACTGGAACGCGGCGCACGCGTTCCGCTGGCGCAAGCGCCAGGGGCGCGGTTACCTGCAGCCGGTACCGGCCG TGTCGTCGATCACGCTCGGCGACTTGCACAACATCGATCGCCAGAAAGCACTGATCGACCAGAACACGCGGCAGTTCGTA CAGCGCAAGCCGGCCAACAACGTGCTGCTGACGGGCGCGCGCGGTACCGGCAAGTCGTCGCTGATCAAGGCGTGCCTGAA TGCGTACGCGAACGACGGACTGCGTCTGATCGAAGTCGACAAGGACGACCTGCACGATCTCGGCGACATCGTCGACCTGA TCTCGCAGCGTCCGGAGCGGTTCATCGTGTTTTGCGACGACCTGTCGTTCGAGGACGGCGAATCGGGCTACAAGGCGCTG AAGGTCGCGCTCGACGGGTCGATCGCCGCGCAGTCGGACAACGTGCTGATCTACGCGACGTCGAACCGCCGCCATCTGCT GCCCGAGTACATGAGCGACAACGAGTCGTACAAGCATCTGCCGGACGGCGAGATTCACCCCGGCGAAGTCGTCGAGGAGA AGATCTCGCTGTCGGAGCGCTTCGGGCTGTGGGTCAGCTTCTATCCGTTCAAGCAGGACGACTACCTCGACATCGTCGCG CACTGGCTGCGTCACTTCGGCTGCCCGGAGACGGAGATCGAGACGGCACGCGGCGATGCGCTCGTATGGGCGCTCGAGCG CGGTTCGCGCTCGGGCCGCGTCGCGTGGCAGTTCGCGCGTGACTGGTCGGGTCGCAAGGAGCAGGCATGA
Upstream 100 bases:
>100_bases CGTGGCGACGCGCAGGCCACCGTCTGGACGTGCGACCTGTCGCACGATTACGTGAGCATCAACGCGGATTACCGCTCCTG ATCGGGAGCGCTCGAACGAC
Downstream 100 bases:
>100_bases GCGCGGATCTGGCACAGGGCGCCGTGCGGGCGCCGGACGGCCGCAAGGTGACGGAAGTCGCGGTCGGCGTGATGGTGCAG CCGGACGGGCGCTATCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; AAA ATPase Superfamily; Intermediate Filament Protein; AAA+ Superfamily ATPase
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLGDLHNIDRQKALIDQNTRQFV QRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKAL KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA
Sequences:
>Translated_289_residues MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLGDLHNIDRQKALIDQNTRQFV QRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKAL KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA >Mature_289_residues MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLGDLHNIDRQKALIDQNTRQFV QRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKAL KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32663; Mature: 32663
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLG CCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEHH DLHNIDRQKALIDQNTRQFVQRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVD HHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEC KDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKALKVALDGSIAAQSDNVLIYAT CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEECCCCEEEEEE SNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA HHHHHCCCCCCHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLG CCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEHH DLHNIDRQKALIDQNTRQFVQRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVD HHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEC KDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKALKVALDGSIAAQSDNVLIYAT CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEECCCCEEEEEE SNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA HHHHHCCCCCCHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA