| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is paaK [H]
Identifier: 116688563
GI number: 116688563
Start: 599333
End: 600631
Strand: Reverse
Name: paaK [H]
Synonym: Bcen2424_0539
Alternate gene names: 116688563
Gene position: 600631-599333 (Counterclockwise)
Preceding gene: 116688564
Following gene: 116688560
Centisome position: 17.24
GC content: 65.82
Gene sequence:
>1299_bases ATGACTACCCCGCTACCGCTCGAGCCGATCGAGACCGCCTCACGCGACGAGCTGACCGCGCTGCAGCTCGAACGCCTCAA GTGGTCGCTCCGGCATGCGTATGACCACTCGCCCGTCTATCGCCGCAAGTTCGACGAAGCGGGCGTGCATCCGGATGACG TGACGACGCTCGCCGACCTGTCGCGCTTCCCGTTCACGACGAAGGGCGATCTGCGCGACAGTTATCCGTTCGGGATGTTC GCGGTGCCGCAGGACCAGATCTCGCGCATCCATGCGTCGTCCGGCACGACCGGCAAGCCGACGGTCGTCGGCTATACGGC CGCCGACATCGACACGTGGGCGAATCTCGTCGCACGTTCGATCCGCGCCGCCGGTGCGCGCCGCGGCGACAAGGTGCACG TCAGCTACGGTTACGGGTTGTTCACGGGCGGGCTCGGCGCGCACTACGGCGCCGAACGCGCGGGCCTCACCGTGATCCCG TTCGGCGGCGGCCAGACCGAAAAGCAGGTGCAGCTGATCCAGGATTTCCGGCCCGACATCATCATGGTCACGCCGAGCTA TATGCTGTCGATCGCCGACGAGATCGAGCGCCAGGGCCTCGATCCGGTGCAGAGTTCACTGCGCATCGGCATCTTCGGCG CGGAGCCGTGGACCAACGACATGCGCGTCGCGATCGAACAGCGGATGGGCATCGATGCGGTCGACATCTACGGGCTGTCC GAAGTGATGGGCCCGGGCGTGGCGTCCGAATGCGTCGAGACCAAGGATGGCCCGACCATCTGGGAAGACCACTTCTATCC GGAAATCATCGACCCGGAAACCGGCGAAGTGCTGCCGGACGGCGAACTCGGCGAGCTCGTGTTCACGTCGTTGACGAAGG AAGCGCTGCCGATCATCCGCTACCGCACCCGTGACCTCACGCGCCTGCTGCCGGGCACCGCCCGGACGATGCGCCGGATG GAGAAGATCACCGGCCGGTCGGACGACATGATGATCGTGCGCGGCGTCAACGTGTTCCCGACGCAAATCGAGGAACAGTT GCTCAAGCAGTGCGCGCTCGCGCCGCACTATCAGATCGTGCTGACGAAGGAAGGCCCGCTCGACGTGCTGACGCTCAACG TCGAGCCCTGCCCGGAAACCGCGCCCGACACCGCGGCGATCCAGGCGGCAAAACAGGCGCTCGCGTACGACATCAAGTCG CTGATCGGCGTGACGGCCGTGATCAACGTGCTGCCGGTGAACGGCATCGAGCGCTCGGTCGGCAAGGCACGCCGCGTCAT CGACAAGCGCAAGAGCTGA
Upstream 100 bases:
>100_bases TCGCGATGTTTCGCGGCAAATCCGCCCAGATCAAGGGCACGGTCATCCCGGAAGACCACTGACGTCGGCGACCCGTCCAT AACAAACACTGGAGACATGC
Downstream 100 bases:
>100_bases GGTCACCTCGCCGCGCAGGCGAGCGGCGCGAACTTCGCGCACTCGCCGCACGCACGCCGCGCAGCGGCGAATCCGAGCCT GCAAATGAAACAGCCCGGTC
Product: phenylacetate-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTTPLPLEPIETASRDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDVTTLADLSRFPFTTKGDLRDSYPFGMF AVPQDQISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP FGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLS EVMGPGVASECVETKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLTKEALPIIRYRTRDLTRLLPGTARTMRRM EKITGRSDDMMIVRGVNVFPTQIEEQLLKQCALAPHYQIVLTKEGPLDVLTLNVEPCPETAPDTAAIQAAKQALAYDIKS LIGVTAVINVLPVNGIERSVGKARRVIDKRKS
Sequences:
>Translated_432_residues MTTPLPLEPIETASRDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDVTTLADLSRFPFTTKGDLRDSYPFGMF AVPQDQISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP FGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLS EVMGPGVASECVETKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLTKEALPIIRYRTRDLTRLLPGTARTMRRM EKITGRSDDMMIVRGVNVFPTQIEEQLLKQCALAPHYQIVLTKEGPLDVLTLNVEPCPETAPDTAAIQAAKQALAYDIKS LIGVTAVINVLPVNGIERSVGKARRVIDKRKS >Mature_431_residues TTPLPLEPIETASRDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDVTTLADLSRFPFTTKGDLRDSYPFGMFA VPQDQISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPF GGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLSE VMGPGVASECVETKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLTKEALPIIRYRTRDLTRLLPGTARTMRRME KITGRSDDMMIVRGVNVFPTQIEEQLLKQCALAPHYQIVLTKEGPLDVLTLNVEPCPETAPDTAAIQAAKQALAYDIKSL IGVTAVINVLPVNGIERSVGKARRVIDKRKS
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=434, Percent_Identity=65.2073732718894, Blast_Score=583, Evalue=1e-168,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 47590; Mature: 47459
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLPLEPIETASRDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDVTTLADL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH SRFPFTTKGDLRDSYPFGMFAVPQDQISRIHASSGTTGKPTVVGYTAADIDTWANLVARS HHCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHH IRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDI HHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCE IMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLS EEECHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHCCHH EVMGPGVASECVETKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLTKEALPIIR HHHCCCHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLKQCALAPHYQIV HHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEE LTKEGPLDVLTLNVEPCPETAPDTAAIQAAKQALAYDIKSLIGVTAVINVLPVNGIERSV EECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GKARRVIDKRKS HHHHHHHHHCCC >Mature Secondary Structure TTPLPLEPIETASRDELTALQLERLKWSLRHAYDHSPVYRRKFDEAGVHPDDVTTLADL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH SRFPFTTKGDLRDSYPFGMFAVPQDQISRIHASSGTTGKPTVVGYTAADIDTWANLVARS HHCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHH IRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDI HHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCE IMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLS EEECHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHCCHH EVMGPGVASECVETKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLTKEALPIIR HHHCCCHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLKQCALAPHYQIV HHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEE LTKEGPLDVLTLNVEPCPETAPDTAAIQAAKQALAYDIKSLIGVTAVINVLPVNGIERSV EECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GKARRVIDKRKS HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]