| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688542
Identifier: 116688542
GI number: 116688542
Start: 577154
End: 577462
Strand: Reverse
Name: 116688542
Synonym: Bcen2424_0518
Alternate gene names: NA
Gene position: 577462-577154 (Counterclockwise)
Preceding gene: 116688543
Following gene: 116688541
Centisome position: 16.58
GC content: 72.82
Gene sequence:
>309_bases ATGCGTGCCCTGCTCCACCGTGCGACCCATGTCGCGACCCTGTCCGCCGCGCTGTTCGTCGCGGGCGCCGCGTTGCCCCC TGCCGCGCACGCCTATCGTGCGTCACCCGGCTACGGCAACGAAGCCGATCTCGACCGTCACGACACGTATCGCAACCGCG ACGGCGAAACCGTGCATGCGCCCGCCCATTCGAAATCGGGCCGCGTGCCGGACGGCGCGAGCGCGCGCTGCCGCGACGGC ACGTACAGCTTCAGCCGTCACCGGCGCGGCACGTGCTCGGGGCACGGCGGCGTCGCCGCGTGGCTGTGA
Upstream 100 bases:
>100_bases GCGCGGCGTAGCGTCGCGCGGCGGCGCCGCGTCGATCCGCCAACATGCGGCGCGGGCCATCGGCCCGCCATCGATAACGA CGAACCGAACGAGAGAGACC
Downstream 100 bases:
>100_bases GCGCGGGTCGGCCGAATGGCCTGCACCGCGCCAGCGGCAGCCGGCGGCGAAGTACAATACGCGCTCGCACCGCCGCGCCC CGCGCGGCACGCTCCGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MRALLHRATHVATLSAALFVAGAALPPAAHAYRASPGYGNEADLDRHDTYRNRDGETVHAPAHSKSGRVPDGASARCRDG TYSFSRHRRGTCSGHGGVAAWL
Sequences:
>Translated_102_residues MRALLHRATHVATLSAALFVAGAALPPAAHAYRASPGYGNEADLDRHDTYRNRDGETVHAPAHSKSGRVPDGASARCRDG TYSFSRHRRGTCSGHGGVAAWL >Mature_102_residues MRALLHRATHVATLSAALFVAGAALPPAAHAYRASPGYGNEADLDRHDTYRNRDGETVHAPAHSKSGRVPDGASARCRDG TYSFSRHRRGTCSGHGGVAAWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10820; Mature: 10820
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALLHRATHVATLSAALFVAGAALPPAAHAYRASPGYGNEADLDRHDTYRNRDGETVHA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEC PAHSKSGRVPDGASARCRDGTYSFSRHRRGTCSGHGGVAAWL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MRALLHRATHVATLSAALFVAGAALPPAAHAYRASPGYGNEADLDRHDTYRNRDGETVHA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEC PAHSKSGRVPDGASARCRDGTYSFSRHRRGTCSGHGGVAAWL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA