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The map label for this gene is ybeC [H]

Identifier: 116688528

GI number: 116688528

Start: 562500

End: 564098

Strand: Direct

Name: ybeC [H]

Synonym: Bcen2424_0504

Alternate gene names: 116688528

Gene position: 562500-564098 (Clockwise)

Preceding gene: 116688526

Following gene: 116688529

Centisome position: 16.15

GC content: 63.16

Gene sequence:

>1599_bases
GTGAAGAGTTCTATTCAACGGAACATCGGCCCGTTTGCATTGATGCTGACGGGGCTGGGTTCGATTATCGGCTCGGGCTG
GCTGTTCGGTGCCTGGAAAGCCGCGAAGATCGCCGGTCCGGCGGCGATCTGCGCCTGGATCATCGGCGCCGTCGTGATTC
TGGCGATTGCGCTGACGTATGCGGAACTGGGCGCGATGTTCCCCGAGTCGGGCGGCATGGTGCGTTACGCGCGCTACTCG
CACGGTTCGCTGGTGGGCTTCATCAGTGCATGGGCCAACTGGATCGCAATCGTATCCGTGATTCCGATCGAGGCCGAAGC
GTCGATCCAGTACATGAGCACGTGGCCGTATCCGTGGGCGCACGCGTTGTTCGTGAACGGCGAATTGCAGACCCTCGGCC
TGCTGCTGTCGGCCGTGCTGGTCGTCGTCTACTTCATGCTGAACTACTGGGGTGTGAAGGCCTTCGCGCGGGCGAACACC
GCGATCACGATCTTCAAGTTCCTGATCCCCGGCCTCACGATCCTCGGCCTGATGCTGACGAGCTTCCACTCGGAGAACCT
CGGCGTCGCATCGAATGCGAGCTTCGCGCCGTACGGCTGGTCGGCCGTGCTGACCGCGGTCGCGACGAGCGGCATCGTGT
TCGCGTTCAACGGCTTCCAGAGCCCGGTGAACCTGGCCGGTGAAGCGCGCAATCCGTCGCGCAGCGTGCCGTTCGCGGTG
ATCACGTCGATCCTGCTGGCGCTCGTGATCTACGTGCTGCTGCAAATGGCCTATATCGGTTCGGTGAATCCGGCCGACGT
CGCGAAGGGCTGGGCGCACTTCAACTTCTCGTCGCCGTTCGCGGAACTCGCGATCGCGCTGAACCTGAACTGGCTCGCGA
TCCTGCTGTACGTCGACGCGTTCATCAGCCCGAGCGGCACCGGTACGACCTACATGGCGACGACCACCCGCATGATCTAT
GCAATGGAGCGCAACAACACGATGCCGAAGATGTTCGGCAACGTGCATCCGATCTACGGCGTGCCGCGCCAGGCGATGTG
GTTCAACCTGCTCGTGTCGTTCGTGTTCCTGTTCTTCTTCCGCGGCTGGAGCTCGCTCGCGGCGGTGATCTCGGTCGCGA
CGGTGATCTCGTACCTGACCGGCCCGATCAGCCTGATGGCGCTGCGCCGTTCGGCGACCGACATCGAGCGTCCGCTGTCG
ATTCCGCTGATGAAGCTGATCGCCCCGTTCGCGTTCGTGTGCGCCTCGCTGATCCTGTACTGGGCGAAGTGGCCGCTGAC
GGGCGAAATCATCCTGCTGATGATCGTCGCGCTGCCGGTGTATTTCTACTTCCAGGCGAAGTCGGGCTGGACCGGCTGGG
GCGCCGACCTGAAGGCCGCATGGTGGCTGGTCGCGTACCTGCCGACGATGGCCGTGCTGTCGCTGATCGGCAGCAAGGAG
TTCGGCGGTCATGGCTACCTGCCGTACGGCTGGGACATGCTGATCGTCGCGGCGATCTCGCTGGTGTTCTACTTCTGGGG
CGTGAATACCGGTTACCGGACCCAGTATCTCGACGAGCGCGAGTCGCACGACGAGATCCTCGAAGGGATCGGTGCCTGA

Upstream 100 bases:

>100_bases
CCCGATCGGGTGACCCTCCCCCCAAGAATGCGTGCGCGGTGCTGTCCGAGCCGATCCCGGACTGCAGGCCGACCATGCTT
TTTGAGACACAGGAGAGGAT

Downstream 100 bases:

>100_bases
CGCCTGACCTGCCGCCGGATTCGGCGGCGGCAGGATGCAGTGAAAAAAGCCCGCCCGGGCATGGCCCGGGCGGGCTTAAT
AGGATGGTCAGCCCGATCCT

Product: amino acid permease-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWAHALFVNGELQTLGLLLSAVLVVVYFMLNYWGVKAFARANT
AITIFKFLIPGLTILGLMLTSFHSENLGVASNASFAPYGWSAVLTAVATSGIVFAFNGFQSPVNLAGEARNPSRSVPFAV
ITSILLALVIYVLLQMAYIGSVNPADVAKGWAHFNFSSPFAELAIALNLNWLAILLYVDAFISPSGTGTTYMATTTRMIY
AMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRSATDIERPLS
IPLMKLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFYFQAKSGWTGWGADLKAAWWLVAYLPTMAVLSLIGSKE
FGGHGYLPYGWDMLIVAAISLVFYFWGVNTGYRTQYLDERESHDEILEGIGA

Sequences:

>Translated_532_residues
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWAHALFVNGELQTLGLLLSAVLVVVYFMLNYWGVKAFARANT
AITIFKFLIPGLTILGLMLTSFHSENLGVASNASFAPYGWSAVLTAVATSGIVFAFNGFQSPVNLAGEARNPSRSVPFAV
ITSILLALVIYVLLQMAYIGSVNPADVAKGWAHFNFSSPFAELAIALNLNWLAILLYVDAFISPSGTGTTYMATTTRMIY
AMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRSATDIERPLS
IPLMKLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFYFQAKSGWTGWGADLKAAWWLVAYLPTMAVLSLIGSKE
FGGHGYLPYGWDMLIVAAISLVFYFWGVNTGYRTQYLDERESHDEILEGIGA
>Mature_532_residues
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWAHALFVNGELQTLGLLLSAVLVVVYFMLNYWGVKAFARANT
AITIFKFLIPGLTILGLMLTSFHSENLGVASNASFAPYGWSAVLTAVATSGIVFAFNGFQSPVNLAGEARNPSRSVPFAV
ITSILLALVIYVLLQMAYIGSVNPADVAKGWAHFNFSSPFAELAIALNLNWLAILLYVDAFISPSGTGTTYMATTTRMIY
AMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRSATDIERPLS
IPLMKLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFYFQAKSGWTGWGADLKAAWWLVAYLPTMAVLSLIGSKE
FGGHGYLPYGWDMLIVAAISLVFYFWGVNTGYRTQYLDERESHDEILEGIGA

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=423, Percent_Identity=23.6406619385343, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI33286428, Length=455, Percent_Identity=23.956043956044, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI110347453, Length=360, Percent_Identity=25, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI71979932, Length=464, Percent_Identity=24.1379310344828, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI187423910, Length=419, Percent_Identity=23.6276849642005, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI7657591, Length=419, Percent_Identity=23.6276849642005, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI7657683, Length=414, Percent_Identity=23.9130434782609, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI181337167, Length=253, Percent_Identity=26.8774703557312, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87082250, Length=466, Percent_Identity=25.5364806866953, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786789, Length=462, Percent_Identity=24.2424242424242, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786302, Length=404, Percent_Identity=24.2574257425743, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790653, Length=366, Percent_Identity=23.4972677595628, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786602, Length=366, Percent_Identity=25.4098360655738, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1787890, Length=379, Percent_Identity=25.3298153034301, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788480, Length=358, Percent_Identity=24.5810055865922, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081915, Length=378, Percent_Identity=24.8677248677249, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87081708, Length=397, Percent_Identity=23.6775818639798, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32566699, Length=320, Percent_Identity=26.25, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17532491, Length=409, Percent_Identity=23.960880195599, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17540018, Length=444, Percent_Identity=25.2252252252252, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17531343, Length=419, Percent_Identity=23.6276849642005, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17533459, Length=428, Percent_Identity=24.0654205607477, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24667468, Length=420, Percent_Identity=25.7142857142857, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI221512776, Length=416, Percent_Identity=22.3557692307692, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24666159, Length=416, Percent_Identity=22.3557692307692, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21357367, Length=453, Percent_Identity=24.9448123620309, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24651635, Length=434, Percent_Identity=22.8110599078341, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24651633, Length=434, Percent_Identity=22.8110599078341, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45550968, Length=421, Percent_Identity=24.2280285035629, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI19921172, Length=421, Percent_Identity=24.2280285035629, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 58138; Mature: 58138

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTY
CCCCHHHCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AELGAMFPESGGMVRYARYSHGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWA
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCE
HALFVNGELQTLGLLLSAVLVVVYFMLNYWGVKAFARANTAITIFKFLIPGLTILGLMLT
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SFHSENLGVASNASFAPYGWSAVLTAVATSGIVFAFNGFQSPVNLAGEARNPSRSVPFAV
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHCCCCCCCCCCCCCHHH
ITSILLALVIYVLLQMAYIGSVNPADVAKGWAHFNFSSPFAELAIALNLNWLAILLYVDA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCCCHHHHHHHCCHHHHHHHHHHHH
FISPSGTGTTYMATTTRMIYAMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFF
HCCCCCCCCEEEEEHHHEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RGWSSLAAVISVATVISYLTGPISLMALRRSATDIERPLSIPLMKLIAPFAFVCASLILY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
WAKWPLTGEIILLMIVALPVYFYFQAKSGWTGWGADLKAAWWLVAYLPTMAVLSLIGSKE
HHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FGGHGYLPYGWDMLIVAAISLVFYFWGVNTGYRTQYLDERESHDEILEGIGA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MKSSIQRNIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAAICAWIIGAVVILAIALTY
CCCCHHHCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AELGAMFPESGGMVRYARYSHGSLVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYPWA
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCE
HALFVNGELQTLGLLLSAVLVVVYFMLNYWGVKAFARANTAITIFKFLIPGLTILGLMLT
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SFHSENLGVASNASFAPYGWSAVLTAVATSGIVFAFNGFQSPVNLAGEARNPSRSVPFAV
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHCCCCCCCCCCCCCHHH
ITSILLALVIYVLLQMAYIGSVNPADVAKGWAHFNFSSPFAELAIALNLNWLAILLYVDA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCCCHHHHHHHCCHHHHHHHHHHHH
FISPSGTGTTYMATTTRMIYAMERNNTMPKMFGNVHPIYGVPRQAMWFNLLVSFVFLFFF
HCCCCCCCCEEEEEHHHEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RGWSSLAAVISVATVISYLTGPISLMALRRSATDIERPLSIPLMKLIAPFAFVCASLILY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
WAKWPLTGEIILLMIVALPVYFYFQAKSGWTGWGADLKAAWWLVAYLPTMAVLSLIGSKE
HHCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FGGHGYLPYGWDMLIVAAISLVFYFWGVNTGYRTQYLDERESHDEILEGIGA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]