| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is zntB [H]
Identifier: 116688512
GI number: 116688512
Start: 547247
End: 548275
Strand: Direct
Name: zntB [H]
Synonym: Bcen2424_0488
Alternate gene names: 116688512
Gene position: 547247-548275 (Clockwise)
Preceding gene: 116688511
Following gene: 116688515
Centisome position: 15.71
GC content: 68.12
Gene sequence:
>1029_bases ATGGACCTGATCGTACAGACTTACGGCGCCGACACGTCCGGCATGGTGTGCGGATTCCGCTTCGATCCGGGCGGCGCCGG CGCGATGCTCGATGCCGACGCGGCCGCCGCATGGCTGCGCACCTGCCGCGAGCACGGCGCGGCCGCATCGGGCGATTTCG TCTGGCTGCATTTCAATCTGGCGCACGGCGCGAGCGAGCGCTGGATGCGCACGCATCTCGGGTTGCCCGACAGCTTCTTC GAATTCCTGCATGAAGGCTCGCGCTCGACGCGCATCGAGCAGGAAGACGGCGCGTTGCGCGCGATCGTCAACGACGTGAT GTTCAACCTCGAGCTCACGCCGTCGGAGATCGCGACGCTGTTCGTCCACGTCGAGCGGCGCATCATGGTGACCGCGCGGC TCAAGCCGCTGCGCTCGGTCGACACGCTGCGCGCGTGCGTGCGCGACGGCGAGCAGTTCCGCTCGCCCGCGGAGCTGCTC GTGCACCTGCTGCGCGACCAGGCCGACCTGCTGATCCAGATCATGCGGCGCACGAGCGTCGACGTCGACCGCATCGAGGA TCGCTTCCTGTCGCAGCGGCTCACGTCGAGCCGCATCGAGCTCGGCGCGATGCGCCGCACGCTGACGCGCCTGCAGCGCA TGCTCGCGCCCGAGCCCGGCTCGATCTTCCGGCTGCTCGCGAAGCCGCCCGCGTGGCTGCATACCGAAGACGTGCAGGAG CTGCGCGAGTCGACCGAAGAGTTCTCGCTGGTGCTCGCCGATCTGGCGGGGCTCAACGAGCGCATCAAGCTGCTGCAGGA AGAGATCGGTTCGCGCCTCGACGAGCAGAACAACCGGACGCTGTTCACGCTGACGCTCGTCACCGTGATCGCGCTGCCGA TCAACATCGTCGCCGGCTTCTTCGGGATGAACGTCGGCGGCGTGCCGTTCTCGGAGAACAAGCACGGCTTCTGGCTGATG GTGCTGCTCGTTGCCGGCTTCACCGCGCTGGCCGCGTGGTGGGCGTTCCGGCGCCGCGACGATCGCTAG
Upstream 100 bases:
>100_bases GCGCGTCACGCCCGTCGGGCATACGTCTCCTTTCTTTTCCCGGCGCGGGCCCGCGACCTGCGATGTGCGGCGCGCCGCGC GCCGCACCACCTTCGACACG
Downstream 100 bases:
>100_bases CGCGCCATCGGGCGACGCATCAACGCATCAACGCAGCAGCGCATCAACGCAGCAGCGCGATCGCGCGTTCGCCGATCACC ATCCCGAGCAGGCCGACGAG
Product: Mg2+ transporter protein, CorA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MDLIVQTYGADTSGMVCGFRFDPGGAGAMLDADAAAAWLRTCREHGAAASGDFVWLHFNLAHGASERWMRTHLGLPDSFF EFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATLFVHVERRIMVTARLKPLRSVDTLRACVRDGEQFRSPAELL VHLLRDQADLLIQIMRRTSVDVDRIEDRFLSQRLTSSRIELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHTEDVQE LRESTEEFSLVLADLAGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGFFGMNVGGVPFSENKHGFWLM VLLVAGFTALAAWWAFRRRDDR
Sequences:
>Translated_342_residues MDLIVQTYGADTSGMVCGFRFDPGGAGAMLDADAAAAWLRTCREHGAAASGDFVWLHFNLAHGASERWMRTHLGLPDSFF EFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATLFVHVERRIMVTARLKPLRSVDTLRACVRDGEQFRSPAELL VHLLRDQADLLIQIMRRTSVDVDRIEDRFLSQRLTSSRIELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHTEDVQE LRESTEEFSLVLADLAGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGFFGMNVGGVPFSENKHGFWLM VLLVAGFTALAAWWAFRRRDDR >Mature_342_residues MDLIVQTYGADTSGMVCGFRFDPGGAGAMLDADAAAAWLRTCREHGAAASGDFVWLHFNLAHGASERWMRTHLGLPDSFF EFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATLFVHVERRIMVTARLKPLRSVDTLRACVRDGEQFRSPAELL VHLLRDQADLLIQIMRRTSVDVDRIEDRFLSQRLTSSRIELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHTEDVQE LRESTEEFSLVLADLAGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGFFGMNVGGVPFSENKHGFWLM VLLVAGFTALAAWWAFRRRDDR
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=292, Percent_Identity=21.9178082191781, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38618; Mature: 38618
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIVQTYGADTSGMVCGFRFDPGGAGAMLDADAAAAWLRTCREHGAAASGDFVWLHFNL CCEEEEECCCCCCCEEEEEEECCCCCCCEECHHHHHHHHHHHHHCCCCCCCCEEEEEEEE AHGASERWMRTHLGLPDSFFEFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATL CCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEECHHHHHHH FVHVERRIMVTARLKPLRSVDTLRACVRDGEQFRSPAELLVHLLRDQADLLIQIMRRTSV HHHHHHHHEEHHHCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC DVDRIEDRFLSQRLTSSRIELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHTEDVQE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHH LRESTEEFSLVLADLAGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGF HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH FGMNVGGVPFSENKHGFWLMVLLVAGFTALAAWWAFRRRDDR HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLIVQTYGADTSGMVCGFRFDPGGAGAMLDADAAAAWLRTCREHGAAASGDFVWLHFNL CCEEEEECCCCCCCEEEEEEECCCCCCCEECHHHHHHHHHHHHHCCCCCCCCEEEEEEEE AHGASERWMRTHLGLPDSFFEFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATL CCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEECHHHHHHH FVHVERRIMVTARLKPLRSVDTLRACVRDGEQFRSPAELLVHLLRDQADLLIQIMRRTSV HHHHHHHHEEHHHCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC DVDRIEDRFLSQRLTSSRIELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHTEDVQE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHH LRESTEEFSLVLADLAGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGF HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH FGMNVGGVPFSENKHGFWLMVLLVAGFTALAAWWAFRRRDDR HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA