| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688511
Identifier: 116688511
GI number: 116688511
Start: 546030
End: 547034
Strand: Direct
Name: 116688511
Synonym: Bcen2424_0487
Alternate gene names: NA
Gene position: 546030-547034 (Clockwise)
Preceding gene: 116688506
Following gene: 116688512
Centisome position: 15.67
GC content: 72.04
Gene sequence:
>1005_bases ATGAGTGCGCCGGAAAATTCAAATTCGAAAACTCCGCCCAGCCTGCTGTCCGATACTAAACCGGCAGGCGAGGGAGGACC TCGGCAGTCGCGCATTCTCGCGGATCTGGAAGGGCGTGTCACGCCGCCCGCCGAGCCGCCGCGCCGTTCGCTGAAGGCGC CGATCGCCGCCGTGGTGGCGTTGGTCGTGGCCGTCGGCGGCTGGGGCGCGTGGCGCATGCAGCAGTCATCGGGCGAACCG CACGTCGCGGTGGCGGCCGCGACGGCACCCGCGGCGGCTGCGCCGGACAAGGCCGCGCCGGCCAGCGGCGCCGCCGTGCA GGTCGCGCAGAACGGCGCGTTCGCCGCATCGGCCGCGCAACCGGCCACGATCGTCAACGACGACTCGGCGTCCCAGACCG TTGCATCCGCATCGGCTTCCGCTGCCTCCGCGGCGGACAACAGCCGGCTGTCGCGCGCGCTCGCCAACGGCGCCGACGAT GGCTCGGGCACGGCGGCCGCGGCTGGCGTCGCCGCAACCGCGGCCGCCGCAGCGGCGACGACCAAGACGGCGAAGGCCGA CGCGTCGAAGAGCACGAAGGTCGCCGCTCACGGCAAGACCGACACGAAAACCGAGGCGAAGGCCGATACGAAGGCCGACA CGAAGGCCGAAGCCCGCAAGCATCGCAAGGAACAGCAGGCCGAGCTCGCGCAGGCGAAGAAGCGCCGCGAAGCGACGCCG ACCCGAACCGCGAAGGCGGCCGGGAAGGACGATCCGGATGCCGATCTGCTTGCCGCGCTCGTCGCGCGCACGAAGCCGGC CGACAAGAAACTCGCCGCCGAGAAGGCGCAGGCCGTGCCGACCAAGGCGTCGGCAACGACCGGCGGCTCGCTGGCGTCGC GCGTGAAGGCGTGTTCGGAGCGCGGTTTCTTCGAGGATCAGCTGTGCCGCTGGCGCGTGTGCGACGGCCACTGGGGCAAG GACCCCGCGTGCCCGAGCGCCGCGCAGTCGGAGACGCGGCAGTAA
Upstream 100 bases:
>100_bases TTGATTGTGTTTTGCAATGCTTGCTCTTAGAATCAGGCTGCTTCGAGAGGCCGGGCTATATTATCGCGGTGAATTAAACC AGGATTCAATGAGACGCTGA
Downstream 100 bases:
>100_bases CGCGTGCCGCGCGCGTCACGAGGGTCTTTCCTGTCAGCGCCGCCCAGTGGGCGGCGCGTTGTTTTTGGGGCAGGAGACGC TGCCGGTATGATGCCGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSAPENSNSKTPPSLLSDTKPAGEGGPRQSRILADLEGRVTPPAEPPRRSLKAPIAAVVALVVAVGGWGAWRMQQSSGEP HVAVAAATAPAAAAPDKAAPASGAAVQVAQNGAFAASAAQPATIVNDDSASQTVASASASAASAADNSRLSRALANGADD GSGTAAAAGVAATAAAAAATTKTAKADASKSTKVAAHGKTDTKTEAKADTKADTKAEARKHRKEQQAELAQAKKRREATP TRTAKAAGKDDPDADLLAALVARTKPADKKLAAEKAQAVPTKASATTGGSLASRVKACSERGFFEDQLCRWRVCDGHWGK DPACPSAAQSETRQ
Sequences:
>Translated_334_residues MSAPENSNSKTPPSLLSDTKPAGEGGPRQSRILADLEGRVTPPAEPPRRSLKAPIAAVVALVVAVGGWGAWRMQQSSGEP HVAVAAATAPAAAAPDKAAPASGAAVQVAQNGAFAASAAQPATIVNDDSASQTVASASASAASAADNSRLSRALANGADD GSGTAAAAGVAATAAAAAATTKTAKADASKSTKVAAHGKTDTKTEAKADTKADTKAEARKHRKEQQAELAQAKKRREATP TRTAKAAGKDDPDADLLAALVARTKPADKKLAAEKAQAVPTKASATTGGSLASRVKACSERGFFEDQLCRWRVCDGHWGK DPACPSAAQSETRQ >Mature_333_residues SAPENSNSKTPPSLLSDTKPAGEGGPRQSRILADLEGRVTPPAEPPRRSLKAPIAAVVALVVAVGGWGAWRMQQSSGEPH VAVAAATAPAAAAPDKAAPASGAAVQVAQNGAFAASAAQPATIVNDDSASQTVASASASAASAADNSRLSRALANGADDG SGTAAAAGVAATAAAAAATTKTAKADASKSTKVAAHGKTDTKTEAKADTKADTKAEARKHRKEQQAELAQAKKRREATPT RTAKAAGKDDPDADLLAALVARTKPADKKLAAEKAQAVPTKASATTGGSLASRVKACSERGFFEDQLCRWRVCDGHWGKD PACPSAAQSETRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33524; Mature: 33393
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPENSNSKTPPSLLSDTKPAGEGGPRQSRILADLEGRVTPPAEPPRRSLKAPIAAVVA CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LVVAVGGWGAWRMQQSSGEPHVAVAAATAPAAAAPDKAAPASGAAVQVAQNGAFAASAAQ HHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCC PATIVNDDSASQTVASASASAASAADNSRLSRALANGADDGSGTAAAAGVAATAAAAAAT CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH TKTAKADASKSTKVAAHGKTDTKTEAKADTKADTKAEARKHRKEQQAELAQAKKRREATP HHHHHCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TRTAKAAGKDDPDADLLAALVARTKPADKKLAAEKAQAVPTKASATTGGSLASRVKACSE CHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH RGFFEDQLCRWRVCDGHWGKDPACPSAAQSETRQ CCCCHHHHHEEEECCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure SAPENSNSKTPPSLLSDTKPAGEGGPRQSRILADLEGRVTPPAEPPRRSLKAPIAAVVA CCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LVVAVGGWGAWRMQQSSGEPHVAVAAATAPAAAAPDKAAPASGAAVQVAQNGAFAASAAQ HHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCC PATIVNDDSASQTVASASASAASAADNSRLSRALANGADDGSGTAAAAGVAATAAAAAAT CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH TKTAKADASKSTKVAAHGKTDTKTEAKADTKADTKAEARKHRKEQQAELAQAKKRREATP HHHHHCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TRTAKAAGKDDPDADLLAALVARTKPADKKLAAEKAQAVPTKASATTGGSLASRVKACSE CHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH RGFFEDQLCRWRVCDGHWGKDPACPSAAQSETRQ CCCCHHHHHEEEECCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA