Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688492

Identifier: 116688492

GI number: 116688492

Start: 519211

End: 520701

Strand: Direct

Name: 116688492

Synonym: Bcen2424_0468

Alternate gene names: NA

Gene position: 519211-520701 (Clockwise)

Preceding gene: 116688491

Following gene: 116688493

Centisome position: 14.9

GC content: 62.78

Gene sequence:

>1491_bases
ATGAACCAGCAAACGGCTGCGGCCCAAGCGAGCGGCGCGGAATACGCCGCCGGGACTTCGCTGCTCGACGACATCGTCGA
GAAGAGCAAGGTCGCGAAATCCGATTCCGAGCATGCGCGTGCGAAGGACCTGATCGGCGAACTCGTGCATCAGGTGCTCG
ACGGCACGGTGATCGTGTCGGACAACCTGTCGGCCACGATCGACGCGCGCGTCGCGGAGCTCGACCGCCTGATTTCCACG
CAGCTTTCCGCCGTGATGCACGCGCCGGAATTCCAGCGCCTCGAAAGCACGTGGCGCGGGATGGATTATCTGGTCAAGGA
AAGCAACACGGGCCAGACGATCAAGATCAAGGCGCTGCACGCGCCGAAGCGCGATCTCGTGCGCGATTTCAAGGGCGCGA
GCGAGTTCGACCAGAGCGCGCTGTTCAAGAAGGTCTACGAAGAGGAATTCGGCACGTTCGGCGGCTCGCCGTTCGGTGCG
CTGATCGGCGATTACGAGATCTCGCGCCAGCCGGAAGACATGTACTTCATCGAGCAGATGTCGCATGTCGCGGCGGCCGC
GCATGCGCCGTTCATCGCGTCGGCGTCGCCGGAGCTGCTCGGCCTCGAGTCGTTCTCCGACCTCGGCAAGCCGCGCGACC
TCGGCAAGGTGTTCGACACCGTCGAATACGCGAAGTGGAAGTCGTTCCGAGACGCCGAGGATTCGCGCTACGTCGGCCTG
ACGCTGCCGCGCTTTCTCGGCCGCCTGCCGTTCAATCCGAAGGACGGCCAGACCGCGGAGAACTTCAACTTCGTCGAGGA
CGTCGACGGCACCGATCACGACAAGTACCTGTGGTGCAACGCGGCATGGGCCTTCGCGGCCCGCCTGACGGCCGCGTTCG
ACGACTTCGGCTGGTGCGCGGCGATCCGCGGCGTCGAAGGCGGCGGCCTCGTCGAGGATCTGCCGACCCACACGTTCAAG
ACCGACGACGGTGAAGTCGCGCTGAAGTGCCCGACCGAAATCGCGATCACCGATCGCCGCGAGAAGGAGCTGAGCGATCT
CGGCTTCATCCCGCTCGTCCATTGCAAGAACTCAGATTACGCCGCGTTCTTCGCTGCGCAGTCGGTGCAGAAGCCCAAGA
AATACAGCACCGACAGCGCGAACGCGAATGCCGTCCTGTCCGCCCAGCTTCAGTACATCTTCTCGGTATCGCGCGTCGCG
CACTACCTGAAGGCGATGATGCGGGACAAGATCGGCAGCTTCGCATCGGCGCAGAACGTGGAGACTTTCCTCAACCGGTG
GATTTCGCAGTACGTCCTGCTCGACGACAACGCCTCGCAGGAACAGAAAGCGCAATTTCCGCTGCGCGAGGCATCCATAC
AAGTGTCGGAGATTCCGGGCAAGCCGGGCTCGTATCGTTCGGTCGCGTTCCTGCGCCCGCACTTTCAGCTCGACGAACTC
TCGATTTCTCTGCGACTTGTCGCTGATCTGCCCAAACCGGCAAATTCATAA

Upstream 100 bases:

>100_bases
GGATCTGCTGTCCGAGGTGCTGAAGAACACGCAGCAGCTGCAGGAGCTCGCGAAGGGCACCGGCGGCGACAAAGACGGCG
AATGACGACGGAGTGTTGAG

Downstream 100 bases:

>100_bases
GCGAGTAAATCGCCCGGGCGGGCCGCCTGGGTAGGACGTTAAAACCACCTCTTTGGGGAGTCGAAGGGCCATGTTACATA
TGCACTTGCAGTTTGGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MNQQTAAAQASGAEYAAGTSLLDDIVEKSKVAKSDSEHARAKDLIGELVHQVLDGTVIVSDNLSATIDARVAELDRLIST
QLSAVMHAPEFQRLESTWRGMDYLVKESNTGQTIKIKALHAPKRDLVRDFKGASEFDQSALFKKVYEEEFGTFGGSPFGA
LIGDYEISRQPEDMYFIEQMSHVAAAAHAPFIASASPELLGLESFSDLGKPRDLGKVFDTVEYAKWKSFRDAEDSRYVGL
TLPRFLGRLPFNPKDGQTAENFNFVEDVDGTDHDKYLWCNAAWAFAARLTAAFDDFGWCAAIRGVEGGGLVEDLPTHTFK
TDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRVA
HYLKAMMRDKIGSFASAQNVETFLNRWISQYVLLDDNASQEQKAQFPLREASIQVSEIPGKPGSYRSVAFLRPHFQLDEL
SISLRLVADLPKPANS

Sequences:

>Translated_496_residues
MNQQTAAAQASGAEYAAGTSLLDDIVEKSKVAKSDSEHARAKDLIGELVHQVLDGTVIVSDNLSATIDARVAELDRLIST
QLSAVMHAPEFQRLESTWRGMDYLVKESNTGQTIKIKALHAPKRDLVRDFKGASEFDQSALFKKVYEEEFGTFGGSPFGA
LIGDYEISRQPEDMYFIEQMSHVAAAAHAPFIASASPELLGLESFSDLGKPRDLGKVFDTVEYAKWKSFRDAEDSRYVGL
TLPRFLGRLPFNPKDGQTAENFNFVEDVDGTDHDKYLWCNAAWAFAARLTAAFDDFGWCAAIRGVEGGGLVEDLPTHTFK
TDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRVA
HYLKAMMRDKIGSFASAQNVETFLNRWISQYVLLDDNASQEQKAQFPLREASIQVSEIPGKPGSYRSVAFLRPHFQLDEL
SISLRLVADLPKPANS
>Mature_496_residues
MNQQTAAAQASGAEYAAGTSLLDDIVEKSKVAKSDSEHARAKDLIGELVHQVLDGTVIVSDNLSATIDARVAELDRLIST
QLSAVMHAPEFQRLESTWRGMDYLVKESNTGQTIKIKALHAPKRDLVRDFKGASEFDQSALFKKVYEEEFGTFGGSPFGA
LIGDYEISRQPEDMYFIEQMSHVAAAAHAPFIASASPELLGLESFSDLGKPRDLGKVFDTVEYAKWKSFRDAEDSRYVGL
TLPRFLGRLPFNPKDGQTAENFNFVEDVDGTDHDKYLWCNAAWAFAARLTAAFDDFGWCAAIRGVEGGGLVEDLPTHTFK
TDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNSDYAAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRVA
HYLKAMMRDKIGSFASAQNVETFLNRWISQYVLLDDNASQEQKAQFPLREASIQVSEIPGKPGSYRSVAFLRPHFQLDEL
SISLRLVADLPKPANS

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54841; Mature: 54841

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQTAAAQASGAEYAAGTSLLDDIVEKSKVAKSDSEHARAKDLIGELVHQVLDGTVIVS
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEE
DNLSATIDARVAELDRLISTQLSAVMHAPEFQRLESTWRGMDYLVKESNTGQTIKIKALH
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEECCCCCCEEEEEEEC
APKRDLVRDFKGASEFDQSALFKKVYEEEFGTFGGSPFGALIGDYEISRQPEDMYFIEQM
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
SHVAAAAHAPFIASASPELLGLESFSDLGKPRDLGKVFDTVEYAKWKSFRDAEDSRYVGL
HHHHHHHCCCEECCCCCCCEECHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
TLPRFLGRLPFNPKDGQTAENFNFVEDVDGTDHDKYLWCNAAWAFAARLTAAFDDFGWCA
EHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHH
AIRGVEGGGLVEDLPTHTFKTDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNSDY
HHCCCCCCCCHHHCCCCCEECCCCCEEEECCCEEEECCCHHHHHHHCCCEEEEEECCCCC
AAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRVAHYLKAMMRDKIGSFASAQNV
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ETFLNRWISQYVLLDDNASQEQKAQFPLREASIQVSEIPGKPGSYRSVAFLRPHFQLDEL
HHHHHHHHHHEEEECCCCCHHHHHCCCHHHHCEEEEECCCCCCCCCEEEEECCCCEEHHH
SISLRLVADLPKPANS
EEEEEEEECCCCCCCC
>Mature Secondary Structure
MNQQTAAAQASGAEYAAGTSLLDDIVEKSKVAKSDSEHARAKDLIGELVHQVLDGTVIVS
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEE
DNLSATIDARVAELDRLISTQLSAVMHAPEFQRLESTWRGMDYLVKESNTGQTIKIKALH
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEECCCCCCEEEEEEEC
APKRDLVRDFKGASEFDQSALFKKVYEEEFGTFGGSPFGALIGDYEISRQPEDMYFIEQM
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
SHVAAAAHAPFIASASPELLGLESFSDLGKPRDLGKVFDTVEYAKWKSFRDAEDSRYVGL
HHHHHHHCCCEECCCCCCCEECHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
TLPRFLGRLPFNPKDGQTAENFNFVEDVDGTDHDKYLWCNAAWAFAARLTAAFDDFGWCA
EHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHH
AIRGVEGGGLVEDLPTHTFKTDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCKNSDY
HHCCCCCCCCHHHCCCCCEECCCCCEEEECCCEEEECCCHHHHHHHCCCEEEEEECCCCC
AAFFAAQSVQKPKKYSTDSANANAVLSAQLQYIFSVSRVAHYLKAMMRDKIGSFASAQNV
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ETFLNRWISQYVLLDDNASQEQKAQFPLREASIQVSEIPGKPGSYRSVAFLRPHFQLDEL
HHHHHHHHHHEEEECCCCCHHHHHCCCHHHHCEEEEECCCCCCCCCEEEEECCCCEEHHH
SISLRLVADLPKPANS
EEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA