Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is tatC [H]

Identifier: 116688462

GI number: 116688462

Start: 483761

End: 484549

Strand: Direct

Name: tatC [H]

Synonym: Bcen2424_0438

Alternate gene names: 116688462

Gene position: 483761-484549 (Clockwise)

Preceding gene: 116688461

Following gene: 116688464

Centisome position: 13.89

GC content: 64.26

Gene sequence:

>789_bases
GTGAGCGACCCCCAGCAGAACCCGGGCGACGCCCCGGAAGAAACCTTCATTTCCCATCTCGTCGAGCTTCGCGATCGCAT
CATTCGCGCGGGGCTGGCCGTGATCGTCGTGTTCCTCGGGCTCGTCTACTGGGCGCCGGACATCTTCAAGCTGCTCGCGC
GGCCGCTGATGGACAACCTGCCGAAAGACGGCAAGATGATCGTCACCGACGTCACCGGCTCGTTCTTCGTGCCGATGAAG
GTGACGATGCTCGTCGCGCTTGTGATCGCGCTGCCGATCGTGCTGTACCAGATCTGGGCGTTCGTCGCGCCGGGGCTGTA
TCAGCACGAGAAGAAGCTCGTCGCGCCGCTCGTCGGCAGCAGCTATTTCCTGTTCCTGTGCGGGATGGCGTTCGCGTATT
TCCTCGTGTTCCCGACGATCTTCCGCGTGATGGCGCACTACAACGCGCCGCTCGGGGCCGAGATGACGACCGACATCGAC
AACTACCTGAGCTTCGTGCTGGGGATGTTCATCGCGTTCGGGGTCACGTTCGAGGTGCCGATCGTCGTCGTGCTGCTCGT
CCGGATGGGCGTGCTGTCCCTGAAGAAGCTGAAGGAGATGCGGCCGTACGTGATCGTCGGCGCATTCGTGGTCGCGGCGG
TCGTCACGCCGCCGGACGTGTTCTCGCAACTGATGCTGGCGCTGCCGCTCGTCGTGCTGTTCGAGATCGGGCTGCTGGCC
GCGCGGTTCTTCGTGCCGAAGAAGCCGGTCGAAGAAGGCGAGGCGGGGAACGGCGAAGCCGCGGGCTGA

Upstream 100 bases:

>100_bases
CCGCACGTGTCGCGCGCCATCAGCCGGCCAGCCTGCGCCGGCCGACGCGCTTCTTCTGAGTCGAGCGCATGCTCGCTCGT
CAATCCTACCGAGGGCCGGT

Downstream 100 bases:

>100_bases
CGGCACGCGGCGCCGGGCGGCTTTCCGGCCCCCCGGCTGCAGTGGCCCGGTTTGGTCCATCAGCCGGTGCGTGAGAAAAC
TACCTTCCCGCCAACGACGA

Product: Sec-independent protein translocase, TatC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNLPKDGKMIVTDVTGSFFVPMK
VTMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGSSYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDID
NYLSFVLGMFIAFGVTFEVPIVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLA
ARFFVPKKPVEEGEAGNGEAAG

Sequences:

>Translated_262_residues
MSDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNLPKDGKMIVTDVTGSFFVPMK
VTMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGSSYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDID
NYLSFVLGMFIAFGVTFEVPIVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLA
ARFFVPKKPVEEGEAGNGEAAG
>Mature_261_residues
SDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNLPKDGKMIVTDVTGSFFVPMKV
TMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGSSYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDIDN
YLSFVLGMFIAFGVTFEVPIVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLAA
RFFVPKKPVEEGEAGNGEAAG

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=249, Percent_Identity=52.2088353413655, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 28816; Mature: 28685

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PKDGKMIVTDVTGSFFVPMKVTMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGS
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDIDNYLSFVLGMFIAFGVTFEVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
IVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ARFFVPKKPVEEGEAGNGEAAG
HHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]