| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is tatC [H]
Identifier: 116688462
GI number: 116688462
Start: 483761
End: 484549
Strand: Direct
Name: tatC [H]
Synonym: Bcen2424_0438
Alternate gene names: 116688462
Gene position: 483761-484549 (Clockwise)
Preceding gene: 116688461
Following gene: 116688464
Centisome position: 13.89
GC content: 64.26
Gene sequence:
>789_bases GTGAGCGACCCCCAGCAGAACCCGGGCGACGCCCCGGAAGAAACCTTCATTTCCCATCTCGTCGAGCTTCGCGATCGCAT CATTCGCGCGGGGCTGGCCGTGATCGTCGTGTTCCTCGGGCTCGTCTACTGGGCGCCGGACATCTTCAAGCTGCTCGCGC GGCCGCTGATGGACAACCTGCCGAAAGACGGCAAGATGATCGTCACCGACGTCACCGGCTCGTTCTTCGTGCCGATGAAG GTGACGATGCTCGTCGCGCTTGTGATCGCGCTGCCGATCGTGCTGTACCAGATCTGGGCGTTCGTCGCGCCGGGGCTGTA TCAGCACGAGAAGAAGCTCGTCGCGCCGCTCGTCGGCAGCAGCTATTTCCTGTTCCTGTGCGGGATGGCGTTCGCGTATT TCCTCGTGTTCCCGACGATCTTCCGCGTGATGGCGCACTACAACGCGCCGCTCGGGGCCGAGATGACGACCGACATCGAC AACTACCTGAGCTTCGTGCTGGGGATGTTCATCGCGTTCGGGGTCACGTTCGAGGTGCCGATCGTCGTCGTGCTGCTCGT CCGGATGGGCGTGCTGTCCCTGAAGAAGCTGAAGGAGATGCGGCCGTACGTGATCGTCGGCGCATTCGTGGTCGCGGCGG TCGTCACGCCGCCGGACGTGTTCTCGCAACTGATGCTGGCGCTGCCGCTCGTCGTGCTGTTCGAGATCGGGCTGCTGGCC GCGCGGTTCTTCGTGCCGAAGAAGCCGGTCGAAGAAGGCGAGGCGGGGAACGGCGAAGCCGCGGGCTGA
Upstream 100 bases:
>100_bases CCGCACGTGTCGCGCGCCATCAGCCGGCCAGCCTGCGCCGGCCGACGCGCTTCTTCTGAGTCGAGCGCATGCTCGCTCGT CAATCCTACCGAGGGCCGGT
Downstream 100 bases:
>100_bases CGGCACGCGGCGCCGGGCGGCTTTCCGGCCCCCCGGCTGCAGTGGCCCGGTTTGGTCCATCAGCCGGTGCGTGAGAAAAC TACCTTCCCGCCAACGACGA
Product: Sec-independent protein translocase, TatC subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNLPKDGKMIVTDVTGSFFVPMK VTMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGSSYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDID NYLSFVLGMFIAFGVTFEVPIVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLA ARFFVPKKPVEEGEAGNGEAAG
Sequences:
>Translated_262_residues MSDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNLPKDGKMIVTDVTGSFFVPMK VTMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGSSYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDID NYLSFVLGMFIAFGVTFEVPIVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLA ARFFVPKKPVEEGEAGNGEAAG >Mature_261_residues SDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNLPKDGKMIVTDVTGSFFVPMKV TMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGSSYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDIDN YLSFVLGMFIAFGVTFEVPIVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLAA RFFVPKKPVEEGEAGNGEAAG
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=249, Percent_Identity=52.2088353413655, Blast_Score=266, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 28816; Mature: 28685
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKDGKMIVTDVTGSFFVPMKVTMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGS CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDIDNYLSFVLGMFIAFGVTFEVP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH IVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ARFFVPKKPVEEGEAGNGEAAG HHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDPQQNPGDAPEETFISHLVELRDRIIRAGLAVIVVFLGLVYWAPDIFKLLARPLMDNL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKDGKMIVTDVTGSFFVPMKVTMLVALVIALPIVLYQIWAFVAPGLYQHEKKLVAPLVGS CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SYFLFLCGMAFAYFLVFPTIFRVMAHYNAPLGAEMTTDIDNYLSFVLGMFIAFGVTFEVP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH IVVVLLVRMGVLSLKKLKEMRPYVIVGAFVVAAVVTPPDVFSQLMLALPLVVLFEIGLLA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ARFFVPKKPVEEGEAGNGEAAG HHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]