Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is tatB

Identifier: 116688461

GI number: 116688461

Start: 483180

End: 483719

Strand: Direct

Name: tatB

Synonym: Bcen2424_0437

Alternate gene names: 116688461

Gene position: 483180-483719 (Clockwise)

Preceding gene: 116688460

Following gene: 116688462

Centisome position: 13.87

GC content: 69.81

Gene sequence:

>540_bases
ATGCTGGATCTCGGTCTTTCGAAGATGGCGCTGATCGGCGTCGTCGCGCTCGTGGTGCTCGGCCCCGAGCGCCTGCCGCG
CGTCGCGCGCACGGCAGGCGCGCTGTTCGGCCGCGCGCAGCGGTACATCAACGACGTGAAGGCGGAGGTCTCGCGCGAAA
TCGAACTCGACGCGCTGCGGACGATGAAGACCGATTTCGAATCGGCCGCGCGCAATGTCGAGACGACGATTCACGACAAC
CTGCGCGAGCACGAGAAGGAACTGAACGACACGTGGCATTCCGCGGTCGGCGGTCTTGACGGAGCTGCCGGCGACGCCGG
TTCCGTCGGTTCCCCGGGTTCCGATACGCCCGCGGCGCCGTCGTGGCGCGGCAGTTCGGCCGCGCTGGCGCCGAAGCGTC
GCAACTGGCGCATCAAGCAGGCGGCGACGCCTGTCTGGTACAAGCGCGCGACCACCCGCCGCACGCACGTGCAGTCGGGC
GCCGCACGTGTCGCGCGCCATCAGCCGGCCAGCCTGCGCCGGCCGACGCGCTTCTTCTGA

Upstream 100 bases:

>100_bases
AGCAACTGCCGCGTTCGGGCGCGGTCGACGTCAACGCGAAGGAAACGACGCGTTCCGATTCGAACAAGGCGTAACGCCGG
CACGCTGACAGGCATTCGCG

Downstream 100 bases:

>100_bases
GTCGAGCGCATGCTCGCTCGTCAATCCTACCGAGGGCCGGTGTGAGCGACCCCCAGCAGAACCCGGGCGACGCCCCGGAA
GAAACCTTCATTTCCCATCT

Product: sec-independent translocase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALRTMKTDFESAARNVETTIHDN
LREHEKELNDTWHSAVGGLDGAAGDAGSVGSPGSDTPAAPSWRGSSAALAPKRRNWRIKQAATPVWYKRATTRRTHVQSG
AARVARHQPASLRRPTRFF

Sequences:

>Translated_179_residues
MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALRTMKTDFESAARNVETTIHDN
LREHEKELNDTWHSAVGGLDGAAGDAGSVGSPGSDTPAAPSWRGSSAALAPKRRNWRIKQAATPVWYKRATTRRTHVQSG
AARVARHQPASLRRPTRFF
>Mature_179_residues
MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALRTMKTDFESAARNVETTIHDN
LREHEKELNDTWHSAVGGLDGAAGDAGSVGSPGSDTPAAPSWRGSSAALAPKRRNWRIKQAATPVWYKRATTRRTHVQSG
AARVARHQPASLRRPTRFF

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TATB_BURCA (Q1BS37)

Other databases:

- EMBL:   CP000378
- RefSeq:   YP_622541.1
- STRING:   Q1BS37
- GeneID:   4091576
- GenomeReviews:   CP000378_GR
- KEGG:   bcn:Bcen_2670
- eggNOG:   COG1826
- HOGENOM:   HBG751935
- OMA:   GKAQRYV
- ProtClustDB:   PRK01919
- BioCyc:   BCEN331271:BCEN_2670-MONOMER
- HAMAP:   MF_00237
- InterPro:   IPR003369
- InterPro:   IPR018448
- InterPro:   IPR003998
- PRINTS:   PR01506
- TIGRFAMs:   TIGR01410

Pfam domain/function: PF02416 MttA_Hcf106

EC number: NA

Molecular weight: Translated: 19546; Mature: 19546

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x16e0840c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALR
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMKTDFESAARNVETTIHDNLREHEKELNDTWHSAVGGLDGAAGDAGSVGSPGSDTPAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SWRGSSAALAPKRRNWRIKQAATPVWYKRATTRRTHVQSGAARVARHQPASLRRPTRFF
CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCH
>Mature Secondary Structure
MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALR
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMKTDFESAARNVETTIHDNLREHEKELNDTWHSAVGGLDGAAGDAGSVGSPGSDTPAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SWRGSSAALAPKRRNWRIKQAATPVWYKRATTRRTHVQSGAARVARHQPASLRRPTRFF
CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA