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The map label for this gene is yadH [H]

Identifier: 116688445

GI number: 116688445

Start: 471732

End: 472553

Strand: Direct

Name: yadH [H]

Synonym: Bcen2424_0421

Alternate gene names: 116688445

Gene position: 471732-472553 (Clockwise)

Preceding gene: 116688444

Following gene: 116688446

Centisome position: 13.54

GC content: 63.63

Gene sequence:

>822_bases
ATGAATCAACACTCCCCACGCGAACTGCGTTCGCTGACGTCCGAGGGGACGGCCCGGCCCGTGCCGGGCAGCGGGTTTCG
CACGCTGTTCTACAAGGAACTGCTGCGTTTCTGGAAGGTGTCGTTCCAGACGGTGCTCGCGCCGATCGTCACGGCGTTGC
TGTATCTGACGATCTTCGGCCACGCGCTGTCGGGCCGCGTCGAGGTGTATCCGGGCGTCGAGTACGTGAGCTTTCTCGTG
CCGGGCCTCGTGATGATGAGCGTGCTGCAGAACGCGTTCGCGAACAGCTCGTCGTCGCTGATCCAGTCGAAGATCACCGG
CAACCTCGTGTTCATGCTGCTGCCGCCGCTGTCGTACCGCGACATCTTCGGCGCGTACGTGCTCGCGTCCGTCGTGCGGG
GGCTCGCGGTCGGCACCGGCGTGTTCGTCGTGACGATCTGGTTTATCCCGATGCACTTCGCGGCGCCGCTGTTCATCATT
GCGTTCGCGCTGCTCGGCTCGGCGATCCTCGGCACGCTCGGCCTGATCGCCGGGATCTGGGCCGAGAAGTTCGACCAGCT
CGCCGCGTTCCAGAACTTCCTGATCATGCCGCTGACGTTCCTGTCCGGCGTGTTCTATTCGACGCATTCGCTGCCGCCCG
TGTGGCGCGAAGTGTCGCGTCTCAACCCGTTTTTCTACATGATCGACGGCTTCCGTTTCGGGTTCTTCGGCGCGTCCGAC
ATCAACCCGTTCGCGAGCCTCGCGATCGTCACCGGTTTCTTCGTGCTGCTCGCGCTGATCGCGATGCGGCTGCTCGCGAC
CGGCTACAAACTGCGTCATTGA

Upstream 100 bases:

>100_bases
CGGCCGGCTGCACGTTCGACGAGATCGAGGTCCGCAAGGCCGACCTCGAGGATGTGTTCGTCCAGGTGATGAACGGAGCC
GAGGTGATCGAGGGTCTGGC

Downstream 100 bases:

>100_bases
TATCGACAGCCCGCGGCCGCCCCGGGGCGGCGCGCGCCGACAGGAGCCTTACACCATGTTGCCGACTCCCGAACAGGTCA
AGCAATACATCGCCGGCGGT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNQHSPRELRSLTSEGTARPVPGSGFRTLFYKELLRFWKVSFQTVLAPIVTALLYLTIFGHALSGRVEVYPGVEYVSFLV
PGLVMMSVLQNAFANSSSSLIQSKITGNLVFMLLPPLSYRDIFGAYVLASVVRGLAVGTGVFVVTIWFIPMHFAAPLFII
AFALLGSAILGTLGLIAGIWAEKFDQLAAFQNFLIMPLTFLSGVFYSTHSLPPVWREVSRLNPFFYMIDGFRFGFFGASD
INPFASLAIVTGFFVLLALIAMRLLATGYKLRH

Sequences:

>Translated_273_residues
MNQHSPRELRSLTSEGTARPVPGSGFRTLFYKELLRFWKVSFQTVLAPIVTALLYLTIFGHALSGRVEVYPGVEYVSFLV
PGLVMMSVLQNAFANSSSSLIQSKITGNLVFMLLPPLSYRDIFGAYVLASVVRGLAVGTGVFVVTIWFIPMHFAAPLFII
AFALLGSAILGTLGLIAGIWAEKFDQLAAFQNFLIMPLTFLSGVFYSTHSLPPVWREVSRLNPFFYMIDGFRFGFFGASD
INPFASLAIVTGFFVLLALIAMRLLATGYKLRH
>Mature_273_residues
MNQHSPRELRSLTSEGTARPVPGSGFRTLFYKELLRFWKVSFQTVLAPIVTALLYLTIFGHALSGRVEVYPGVEYVSFLV
PGLVMMSVLQNAFANSSSSLIQSKITGNLVFMLLPPLSYRDIFGAYVLASVVRGLAVGTGVFVVTIWFIPMHFAAPLFII
AFALLGSAILGTLGLIAGIWAEKFDQLAAFQNFLIMPLTFLSGVFYSTHSLPPVWREVSRLNPFFYMIDGFRFGFFGASD
INPFASLAIVTGFFVLLALIAMRLLATGYKLRH

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=247, Percent_Identity=38.4615384615385, Blast_Score=171, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30156; Mature: 30156

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQHSPRELRSLTSEGTARPVPGSGFRTLFYKELLRFWKVSFQTVLAPIVTALLYLTIFG
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HALSGRVEVYPGVEYVSFLVPGLVMMSVLQNAFANSSSSLIQSKITGNLVFMLLPPLSYR
HHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCHH
DIFGAYVLASVVRGLAVGTGVFVVTIWFIPMHFAAPLFIIAFALLGSAILGTLGLIAGIW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEKFDQLAAFQNFLIMPLTFLSGVFYSTHSLPPVWREVSRLNPFFYMIDGFRFGFFGASD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHEEECCCCCCCCCCCC
INPFASLAIVTGFFVLLALIAMRLLATGYKLRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC
>Mature Secondary Structure
MNQHSPRELRSLTSEGTARPVPGSGFRTLFYKELLRFWKVSFQTVLAPIVTALLYLTIFG
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HALSGRVEVYPGVEYVSFLVPGLVMMSVLQNAFANSSSSLIQSKITGNLVFMLLPPLSYR
HHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCHH
DIFGAYVLASVVRGLAVGTGVFVVTIWFIPMHFAAPLFIIAFALLGSAILGTLGLIAGIW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEKFDQLAAFQNFLIMPLTFLSGVFYSTHSLPPVWREVSRLNPFFYMIDGFRFGFFGASD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHEEECCCCCCCCCCCC
INPFASLAIVTGFFVLLALIAMRLLATGYKLRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]