| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is fusA1 [H]
Identifier: 116688369
GI number: 116688369
Start: 401668
End: 403770
Strand: Direct
Name: fusA1 [H]
Synonym: Bcen2424_0345
Alternate gene names: 116688369
Gene position: 401668-403770 (Clockwise)
Preceding gene: 116688368
Following gene: 116688370
Centisome position: 11.53
GC content: 60.87
Gene sequence:
>2103_bases GTGGCTCGCAAGACTCCTATCGAGCGCTACCGCAATATCGGTATTAGCGCTCACATCGACGCCGGCAAAACGACGACGAC CGAGCGCATTCTGTTTTACACCGGTGTGAACCACAAGATCGGTGAAGTCCACGACGGCGCAGCCACGATGGACTGGATGG AGCAGGAACAAGAGCGTGGCATCACGATCACGTCCGCTGCTACCACGGCCTTCTGGAAGGGCATGGGCGGCAACTATCCG GAACACCGCATCAACATCATCGACACCCCGGGCCACGTCGACTTCACGATCGAAGTGGAACGCTCGATGCGCGTGCTCGA CGGCGCGTGCATGGTGTACTGCGCAGTGGGCGGCGTGCAGCCGCAGTCGGAAACGGTGTGGCGCCAGGCGAACAAGTACA AGGTGCCGCGTCTCGCGTTCGTCAACAAGATGGACCGTACCGGCGCGAACTTCTTCAAGGTCTACGACCAGCTCCGTCTG CGCCTGAAGGCGAACCCGGTTCCGGTCGTGGTGCCGATCGGCGCGGAAGAAAACTTCAAGGGCGTCGTCGACCTGATCAA GATGAAGGCGATCATTTGGGACGAAGCGTCGCAAGGCACGAAGTTCGACTACGTCGACATCCCGGCCGAGCTCGCGGAGA CCTGCAAGGAATGGCGCGAAAAGATGGTCGAAGTGGCTGCTGAAGCCAGCGAAGACCTGATGAACAAGTACCTGGAAGAA GGCGATCTGCCGGAAGCCGACATCGTCAAGGCGCTGCGTGATCGTACGATCGCGTGCGAAATCCAGCCGATGCTGTGCGG TACCGCGTTCAAGAACAAGGGCGTGCAGCGCATGCTCGACGCCGTGATCGATTTCCTGCCGTCGCCGGTCGACATCCCGC CGGTCAAGGGCGAACTCGAAAACGGCGAAGAAGCGGAGCGCAAGGCGTCGGACGAAGAGAAGTTCTCGTCGCTCGCGTTC AAGATCATGACCGACCCGTTCGTCGGCCAGCTGATCTTCTTCCGTGTGTACTCGGGCGTCGTCAACTCGGGCGACACGCT GCTGAACTCGACCAAGGGCAAGAAGGAACGCCTCGGCCGTATTCTGCAGATGCACGCGAACCAGCGTGAAGAAATCAAGG AAGTCCGTGCGGGCGACATCGCCGCAGCGGTCGGCCTGAAGGAAGCAACCACGGGCGACACGCTGTGCGACCCGGCGAAC CCGATCGTTCTTGAACGCATGGTGTTCCCGGAGCCGGTGATTTCGCAGGCAGTCGAGCCGAAGACCAAGGCTGACCAGGA AAAGATGGGCCTCGCACTGAACCGTCTGGCTCAGGAAGACCCGTCGTTCCGCGTGCAGACCGACGAAGAGTCGGGCCAGA CCATCATTTCGGGCATGGGCGAGCTCCACCTCGAAATTCTGGTCGACCGGATGAAGCGTGAGTTCGGCGTGGAAGCGACC GTCGGCAAGCCGCAGGTTGCGTACCGCGAAACGATCCGTTCGACGGCGAAGGATGTCGACGGCAAGTTCGTCAAGCAGTC GGGTGGTCGCGGCCAGTACGGTCACGCGGTCATCACGCTCGAGCCGAACGAACAAGGCAAGGGCTACGAGTTCTTCGACG AGATCAAGGGTGGTGTGATTCCGCGTGAATACATCCCGGCGGTCGACAAGGGTATCCAGGACACGCTGAAGTCGGGCGTG CTGGCTGGCTTCCCGGTCGTCGACGTGAAGGTTCACCTGACGTTCGGTTCGTACCACGACGTTGACTCGAACGAAAACGC GTTCCGCATGGCCGGTTCGATGGCGTTCAAGGAAGCGATGCGCAAGGCGAACCCGGTCGTCCTCGAGCCGATGATGGCTG TCGAAGTCGAGACGCCGGAAGACTACATGGGCAACGTGATGGGCGACCTGTCGGGCCGTCGCGGCATCGTCCAGGGCATG GAAGACATGGTTGGCGGCGGCAAGATCGTGCGCGCCGAAGTGCCGCTGTCGGAAATGTTCGGTTACTCGACGTCGCTGCG TTCGCTGACGCAAGGTCGTGCAACGTACACGATGGAGTTCAAGCACTACGCTGAAGCTCCGCGCAACGTTGCTGAAGCGA TCATCAGCGCGAAGTCGAAGTAA
Upstream 100 bases:
>100_bases AAATAAATTCCGGGCGGGTGCGCTTTTCAGGCGCCTCGCCCGTTTGTGTTGAGGCGTGATGCAGCAGGGCTGCATCACGT CATCCCAGTAGAGGATCAAA
Downstream 100 bases:
>100_bases ATCTGTAGCTACCCACCGATAATTTTTGAAAGAAGAGAATCATGGCAAAAGGTAAATTTGAGCGGACCAAGCCGCACGTG AACGTTGGTACGATTGGTCA
Product: elongation factor G
Products: NA
Alternate protein names: EF-G 1 [H]
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWKGMGGNYP EHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQLRL RLKANPVPVVVPIGAEENFKGVVDLIKMKAIIWDEASQGTKFDYVDIPAELAETCKEWREKMVEVAAEASEDLMNKYLEE GDLPEADIVKALRDRTIACEIQPMLCGTAFKNKGVQRMLDAVIDFLPSPVDIPPVKGELENGEEAERKASDEEKFSSLAF KIMTDPFVGQLIFFRVYSGVVNSGDTLLNSTKGKKERLGRILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPAN PIVLERMVFPEPVISQAVEPKTKADQEKMGLALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFGVEAT VGKPQVAYRETIRSTAKDVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFFDEIKGGVIPREYIPAVDKGIQDTLKSGV LAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMRKANPVVLEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGM EDMVGGGKIVRAEVPLSEMFGYSTSLRSLTQGRATYTMEFKHYAEAPRNVAEAIISAKSK
Sequences:
>Translated_700_residues MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWKGMGGNYP EHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQLRL RLKANPVPVVVPIGAEENFKGVVDLIKMKAIIWDEASQGTKFDYVDIPAELAETCKEWREKMVEVAAEASEDLMNKYLEE GDLPEADIVKALRDRTIACEIQPMLCGTAFKNKGVQRMLDAVIDFLPSPVDIPPVKGELENGEEAERKASDEEKFSSLAF KIMTDPFVGQLIFFRVYSGVVNSGDTLLNSTKGKKERLGRILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPAN PIVLERMVFPEPVISQAVEPKTKADQEKMGLALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFGVEAT VGKPQVAYRETIRSTAKDVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFFDEIKGGVIPREYIPAVDKGIQDTLKSGV LAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMRKANPVVLEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGM EDMVGGGKIVRAEVPLSEMFGYSTSLRSLTQGRATYTMEFKHYAEAPRNVAEAIISAKSK >Mature_699_residues ARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWKGMGGNYPE HRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQLRLR LKANPVPVVVPIGAEENFKGVVDLIKMKAIIWDEASQGTKFDYVDIPAELAETCKEWREKMVEVAAEASEDLMNKYLEEG DLPEADIVKALRDRTIACEIQPMLCGTAFKNKGVQRMLDAVIDFLPSPVDIPPVKGELENGEEAERKASDEEKFSSLAFK IMTDPFVGQLIFFRVYSGVVNSGDTLLNSTKGKKERLGRILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPANP IVLERMVFPEPVISQAVEPKTKADQEKMGLALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFGVEATV GKPQVAYRETIRSTAKDVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFFDEIKGGVIPREYIPAVDKGIQDTLKSGVL AGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMRKANPVVLEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGME DMVGGGKIVRAEVPLSEMFGYSTSLRSLTQGRATYTMEFKHYAEAPRNVAEAIISAKSK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=706, Percent_Identity=44.6175637393768, Blast_Score=560, Evalue=1e-159, Organism=Homo sapiens, GI19923640, Length=718, Percent_Identity=39.1364902506964, Blast_Score=465, Evalue=1e-131, Organism=Homo sapiens, GI25306287, Length=718, Percent_Identity=37.1866295264624, Blast_Score=421, Evalue=1e-117, Organism=Homo sapiens, GI25306283, Length=456, Percent_Identity=41.0087719298246, Blast_Score=308, Evalue=9e-84, Organism=Homo sapiens, GI4503483, Length=427, Percent_Identity=28.8056206088993, Blast_Score=113, Evalue=6e-25, Organism=Homo sapiens, GI157426893, Length=153, Percent_Identity=34.640522875817, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI94966754, Length=136, Percent_Identity=40.4411764705882, Blast_Score=94, Evalue=6e-19, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=40.8333333333333, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=40.8333333333333, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=40.8333333333333, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1789738, Length=705, Percent_Identity=74.1843971631206, Blast_Score=1069, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=493, Percent_Identity=27.789046653144, Blast_Score=162, Evalue=7e-41, Organism=Escherichia coli, GI48994988, Length=182, Percent_Identity=37.3626373626374, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI1788922, Length=148, Percent_Identity=35.8108108108108, Blast_Score=88, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17533571, Length=691, Percent_Identity=42.5470332850941, Blast_Score=511, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17556745, Length=718, Percent_Identity=30.7799442896936, Blast_Score=317, Evalue=1e-86, Organism=Caenorhabditis elegans, GI17506493, Length=427, Percent_Identity=29.9765807962529, Blast_Score=119, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17557151, Length=209, Percent_Identity=33.0143540669856, Blast_Score=96, Evalue=9e-20, Organism=Caenorhabditis elegans, GI71988819, Length=146, Percent_Identity=32.1917808219178, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71988811, Length=146, Percent_Identity=32.1917808219178, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=694, Percent_Identity=42.9394812680115, Blast_Score=549, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322359, Length=806, Percent_Identity=31.7617866004963, Blast_Score=385, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6324707, Length=431, Percent_Identity=27.6102088167053, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320593, Length=431, Percent_Identity=27.6102088167053, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323320, Length=157, Percent_Identity=36.3057324840764, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6324166, Length=144, Percent_Identity=37.5, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24582462, Length=711, Percent_Identity=44.8663853727145, Blast_Score=581, Evalue=1e-166, Organism=Drosophila melanogaster, GI221458488, Length=717, Percent_Identity=31.9386331938633, Blast_Score=352, Evalue=7e-97, Organism=Drosophila melanogaster, GI24585711, Length=431, Percent_Identity=28.0742459396752, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24585713, Length=431, Percent_Identity=28.0742459396752, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24585709, Length=431, Percent_Identity=28.0742459396752, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI78706572, Length=161, Percent_Identity=36.6459627329193, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI28574573, Length=143, Percent_Identity=38.4615384615385, Blast_Score=91, Evalue=4e-18,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 77537; Mature: 77405
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWKGMGGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQ EEEEEHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHEEHHECCCCC PQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQLRLRLKANPVPVVVPIGAEENFK CCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCEEEEECCCCCCHH GVVDLIKMKAIIWDEASQGTKFDYVDIPAELAETCKEWREKMVEVAAEASEDLMNKYLEE HHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDLPEADIVKALRDRTIACEIQPMLCGTAFKNKGVQRMLDAVIDFLPSPVDIPPVKGELE CCCCHHHHHHHHHCCEEEEEEEHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC NGEEAERKASDEEKFSSLAFKIMTDPFVGQLIFFRVYSGVVNSGDTLLNSTKGKKERLGR CCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH ILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPANPIVLERMVFPEPVISQAVEP HHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCC KTKADQEKMGLALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFGVEAT CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEC VGKPQVAYRETIRSTAKDVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFFDEIKGGVI CCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCC PREYIPAVDKGIQDTLKSGVLAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAM CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH RKANPVVLEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGMEDMVGGGKIVRAEVPLSEMF HHCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCHHHHH GYSTSLRSLTQGRATYTMEFKHYAEAPRNVAEAIISAKSK CCHHHHHHHHCCCCEEEEEHHHHHHCHHHHHHHHHHCCCC >Mature Secondary Structure ARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTAFWKGMGGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQ EEEEEHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHEEHHECCCCC PQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVYDQLRLRLKANPVPVVVPIGAEENFK CCHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCEEEEECCCCCCHH GVVDLIKMKAIIWDEASQGTKFDYVDIPAELAETCKEWREKMVEVAAEASEDLMNKYLEE HHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDLPEADIVKALRDRTIACEIQPMLCGTAFKNKGVQRMLDAVIDFLPSPVDIPPVKGELE CCCCHHHHHHHHHCCEEEEEEEHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC NGEEAERKASDEEKFSSLAFKIMTDPFVGQLIFFRVYSGVVNSGDTLLNSTKGKKERLGR CCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH ILQMHANQREEIKEVRAGDIAAAVGLKEATTGDTLCDPANPIVLERMVFPEPVISQAVEP HHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCC KTKADQEKMGLALNRLAQEDPSFRVQTDEESGQTIISGMGELHLEILVDRMKREFGVEAT CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEC VGKPQVAYRETIRSTAKDVDGKFVKQSGGRGQYGHAVITLEPNEQGKGYEFFDEIKGGVI CCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCC PREYIPAVDKGIQDTLKSGVLAGFPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAM CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH RKANPVVLEPMMAVEVETPEDYMGNVMGDLSGRRGIVQGMEDMVGGGKIVRAEVPLSEMF HHCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCHHHHH GYSTSLRSLTQGRATYTMEFKHYAEAPRNVAEAIISAKSK CCHHHHHHHHCCCCEEEEEHHHHHHCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA