| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688344
Identifier: 116688344
GI number: 116688344
Start: 366351
End: 366611
Strand: Direct
Name: 116688344
Synonym: Bcen2424_0320
Alternate gene names: NA
Gene position: 366351-366611 (Clockwise)
Preceding gene: 116688342
Following gene: 116688346
Centisome position: 10.52
GC content: 69.35
Gene sequence:
>261_bases GTGCCCGGCCGCGTGGGTTCGTGCCGACGCAGTCGGGGAGGCGCCGGCAGTTTTACAGGAGGTGCAATGAACACACGTCA TATCCAGAGTTTCCTGATCGTGTCCGCCGCGTTTTTCTCGATGACCGGCCCGGTGCACGCGCGAGGCGCGAGCGCACTGG CGGCAGCCGGCGCGCAGATGCAGCAGATCGTGCCGGCCCAAGGCGCCGCGGCCCAGCCGTCGGCCGAACGTGCCGCCGAG TCGAAGGCGAGCGTGCGTTGA
Upstream 100 bases:
>100_bases ATTGAGAAACAGGGCGAGATGATGCGTTACATCATGTAAAAGCATGTAAAGCCGCGTTGATCTTCGGGCAAATGCCGTTA ATCTTGTCGGCCTGCCGGAG
Downstream 100 bases:
>100_bases TGCGATCGCGCGGCCCGCGGGCTGCGCCGGAATATGAAAAGGGCGGGAATCCTCGGATTCCCGCCCTTTTTCTTTGCGCT GCGCGGAGGGTGCGGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MPGRVGSCRRSRGGAGSFTGGAMNTRHIQSFLIVSAAFFSMTGPVHARGASALAAAGAQMQQIVPAQGAAAQPSAERAAE SKASVR
Sequences:
>Translated_86_residues MPGRVGSCRRSRGGAGSFTGGAMNTRHIQSFLIVSAAFFSMTGPVHARGASALAAAGAQMQQIVPAQGAAAQPSAERAAE SKASVR >Mature_85_residues PGRVGSCRRSRGGAGSFTGGAMNTRHIQSFLIVSAAFFSMTGPVHARGASALAAAGAQMQQIVPAQGAAAQPSAERAAES KASVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8630; Mature: 8499
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRVGSCRRSRGGAGSFTGGAMNTRHIQSFLIVSAAFFSMTGPVHARGASALAAAGAQM CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH QQIVPAQGAAAQPSAERAAESKASVR HHHCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure PGRVGSCRRSRGGAGSFTGGAMNTRHIQSFLIVSAAFFSMTGPVHARGASALAAAGAQM CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH QQIVPAQGAAAQPSAERAAESKASVR HHHCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA