| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is fcuA [H]
Identifier: 116688267
GI number: 116688267
Start: 281773
End: 283896
Strand: Reverse
Name: fcuA [H]
Synonym: Bcen2424_0243
Alternate gene names: 116688267
Gene position: 283896-281773 (Counterclockwise)
Preceding gene: 116688269
Following gene: 116688265
Centisome position: 8.15
GC content: 67.23
Gene sequence:
>2124_bases ATGACCGTCAGCCTTGCCCGCCCTCCTGTCCGTCCACGCCGCGTGGCCGCCGCCCTCGCCTGCCTTGCCGCCTCGCTCGC GCATGCGGACGATTCATCCGGCGACGCCGCGGTCCTGCCTGCCCTGAACATCACGGCCGCACACGATTCACCCCAACACT TGACCGACACGATCTCGACCGGTGCACTCGGCACCCGCCGCCAGCTGGACACGCCGTTCTCGACGACGATCGTCACGTCG GAAGAACTCGAGGCGCGTCAGCCGTACAAGCTCGGCGACGTGTTCGCGAACGACGCGTCAGTGTCCGACAACAGCGGCGC GTACAGCGCGTGGGCCAGCTACATGACCGTGCGCGGCATGCAGCTCGACTGGCAGAACGGCTACAAGATCGACGGGCTGC CGTTCGTCACGTACGGCATCACGATGCCGTACGAGCAGCTCGAGCGCGTCGAACTGCTGAAGGGGCTCGGCGGCTTCCTG TATGGCTTCGTGACGCCGGGCGGCGTCGTCAACTACGTGACGAAGCAGCCGGGCGCCGAGCCGGTGCGCAGCGTCGATGT CAACTACCGCAGCACCAACGTGTGGACGGAGCATGTCGATCTCGGCCAGCGCTTCGGGCCGAACGACATGTTCGGCGCGC GGCTGAATGCGACGCACGAGGAAGGCAAGACGTACAACGACGGCAACATCCGCCGGGACAGCGTGTCGCTCGCACTGCAG GCGAACCTGACGCGCGACCTCTCCGTGTCGTTCGGTGCGCTGTACCAGGATCGCCGCACGACCGGCCAGACGCCGTCGAT CTTCACCGGCAGCTATCCGGGTGGCGCACTGCCCGCCACGATCAGCGGCGGGTCGACGAACCTGGGTGGCAAGGACCAGT ACCTGAACACGAACCTGCAGCTCTATACGGCCGGGCTGCAATACCAGCTCGCGCCGGACTGGCAGCTCGACGTCGCGTAC AGCTACAGCAAGGCGACACGCCGACGCAACGAAAGCACCCTGTACCTGCAGGACGCCGCAGGCAACTACACCGACAGCCG CTACGTCGGCATGGAGGATCACCGCTTCAGCCAATGGCGCGCGATGGTCGAAGGCAAGGTGCGCACGGGCCCGTTCAGCC ACCAGATCGTGCTCGGCGCGTCGTGGCAGAAGCAGGCGAACGACTATTCGGCGAACAGCGTGTTCGTGCCGCTGGGCGCC GGCAACCTCTATGCGCCGAATCCGTACCGCTACGAGAGTCCGCACGGCTTCATCCAGTACCGCACGAGCGAGATCGTGCA GAAATCGCTGTTCGCGAGCGACACCGTGCAGTTGACCGAGCGCTGGTCGGTGCTGGCCGGCGTGCGCTACATGAACTACG AGCAGCGCGCGTTCCAGGCAAGCGGCGCCGAGGACCCCGGTTACCGCCAGAACGGCGTGGTGACGCCGACTTTCGCGGTG ATGTTCAAGCTCGCGCCGACGACCACCGCGTACGCGAGCTACGCCGAGTCGCTCGAGCCCGGCAGCCGCGTGAACGACGT CTACGCGAACGCGGGACAGGTGCTCAAGCCGCTGCGCAGCAAGCAGTACGAGCTGGGGATCAAGAGCGAGCACGCGCGCT GGAGTGCGACGGCCGCGCTGTTCCGCATCGAGCGCAGCGCCGAATACGCGAACGCCGCGAACGTCTACGTGCAGGATGGC GAATCGATCATTCAGGGGATCGAGGTCGGCGCGCGCGCGAAATTCGGCGCGCACTGGAACGCGGGCGTCGATGCGATGCT GCTCGACGCGTGGTACGCGAACGGGATCGGCAACAACGGCAACCGTGTCGCCGGCGCGCCGCGCTTCGTACTCGCGGGCG ACCTCGGCTATGCGGTGCCGGGCGTGCCGGGGCTGACGCTCGGCGTCGACGCGAAATTCACCGGCGCGACGCCGCTGCGC GCGGCCGGCGGCCTCGACGCGCCGGGCTTTCTCGTCGTCAACGCCGGCGCACGCTACCTGACGCGGGTCGGCCGCCACGA CGTGACGCTGCGCGCATCGATCGACAACGTGCTGAACCGCCGTTACTGGGAATACCAGTACGCGGACTACGTGAAGCCGG GCGATCCGCGCACGGTGAGCCTGAGCGCGAAGATCGACTTCTGA
Upstream 100 bases:
>100_bases ACGCGGCATGGAATTGTTGCGCGGTGGGCGGGTTTTGATACGATGCGCGACATTTTAACGCAATGCGAATGATTCTTACT CGCATTTTTGCTCGCTCGCC
Downstream 100 bases:
>100_bases ACGCAGCGGCCGGCGGCTGCATACCGCAGGCCCCGGCCGGCGCCGCCGCCCGGCCCGTCGGCCACCGCAGCCTCGGGATT TTCCCGGCCTGCAAAAGCAA
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 707; Mature: 706
Protein sequence:
>707_residues MTVSLARPPVRPRRVAAALACLAASLAHADDSSGDAAVLPALNITAAHDSPQHLTDTISTGALGTRRQLDTPFSTTIVTS EELEARQPYKLGDVFANDASVSDNSGAYSAWASYMTVRGMQLDWQNGYKIDGLPFVTYGITMPYEQLERVELLKGLGGFL YGFVTPGGVVNYVTKQPGAEPVRSVDVNYRSTNVWTEHVDLGQRFGPNDMFGARLNATHEEGKTYNDGNIRRDSVSLALQ ANLTRDLSVSFGALYQDRRTTGQTPSIFTGSYPGGALPATISGGSTNLGGKDQYLNTNLQLYTAGLQYQLAPDWQLDVAY SYSKATRRRNESTLYLQDAAGNYTDSRYVGMEDHRFSQWRAMVEGKVRTGPFSHQIVLGASWQKQANDYSANSVFVPLGA GNLYAPNPYRYESPHGFIQYRTSEIVQKSLFASDTVQLTERWSVLAGVRYMNYEQRAFQASGAEDPGYRQNGVVTPTFAV MFKLAPTTTAYASYAESLEPGSRVNDVYANAGQVLKPLRSKQYELGIKSEHARWSATAALFRIERSAEYANAANVYVQDG ESIIQGIEVGARAKFGAHWNAGVDAMLLDAWYANGIGNNGNRVAGAPRFVLAGDLGYAVPGVPGLTLGVDAKFTGATPLR AAGGLDAPGFLVVNAGARYLTRVGRHDVTLRASIDNVLNRRYWEYQYADYVKPGDPRTVSLSAKIDF
Sequences:
>Translated_707_residues MTVSLARPPVRPRRVAAALACLAASLAHADDSSGDAAVLPALNITAAHDSPQHLTDTISTGALGTRRQLDTPFSTTIVTS EELEARQPYKLGDVFANDASVSDNSGAYSAWASYMTVRGMQLDWQNGYKIDGLPFVTYGITMPYEQLERVELLKGLGGFL YGFVTPGGVVNYVTKQPGAEPVRSVDVNYRSTNVWTEHVDLGQRFGPNDMFGARLNATHEEGKTYNDGNIRRDSVSLALQ ANLTRDLSVSFGALYQDRRTTGQTPSIFTGSYPGGALPATISGGSTNLGGKDQYLNTNLQLYTAGLQYQLAPDWQLDVAY SYSKATRRRNESTLYLQDAAGNYTDSRYVGMEDHRFSQWRAMVEGKVRTGPFSHQIVLGASWQKQANDYSANSVFVPLGA GNLYAPNPYRYESPHGFIQYRTSEIVQKSLFASDTVQLTERWSVLAGVRYMNYEQRAFQASGAEDPGYRQNGVVTPTFAV MFKLAPTTTAYASYAESLEPGSRVNDVYANAGQVLKPLRSKQYELGIKSEHARWSATAALFRIERSAEYANAANVYVQDG ESIIQGIEVGARAKFGAHWNAGVDAMLLDAWYANGIGNNGNRVAGAPRFVLAGDLGYAVPGVPGLTLGVDAKFTGATPLR AAGGLDAPGFLVVNAGARYLTRVGRHDVTLRASIDNVLNRRYWEYQYADYVKPGDPRTVSLSAKIDF >Mature_706_residues TVSLARPPVRPRRVAAALACLAASLAHADDSSGDAAVLPALNITAAHDSPQHLTDTISTGALGTRRQLDTPFSTTIVTSE ELEARQPYKLGDVFANDASVSDNSGAYSAWASYMTVRGMQLDWQNGYKIDGLPFVTYGITMPYEQLERVELLKGLGGFLY GFVTPGGVVNYVTKQPGAEPVRSVDVNYRSTNVWTEHVDLGQRFGPNDMFGARLNATHEEGKTYNDGNIRRDSVSLALQA NLTRDLSVSFGALYQDRRTTGQTPSIFTGSYPGGALPATISGGSTNLGGKDQYLNTNLQLYTAGLQYQLAPDWQLDVAYS YSKATRRRNESTLYLQDAAGNYTDSRYVGMEDHRFSQWRAMVEGKVRTGPFSHQIVLGASWQKQANDYSANSVFVPLGAG NLYAPNPYRYESPHGFIQYRTSEIVQKSLFASDTVQLTERWSVLAGVRYMNYEQRAFQASGAEDPGYRQNGVVTPTFAVM FKLAPTTTAYASYAESLEPGSRVNDVYANAGQVLKPLRSKQYELGIKSEHARWSATAALFRIERSAEYANAANVYVQDGE SIIQGIEVGARAKFGAHWNAGVDAMLLDAWYANGIGNNGNRVAGAPRFVLAGDLGYAVPGVPGLTLGVDAKFTGATPLRA AGGLDAPGFLVVNAGARYLTRVGRHDVTLRASIDNVLNRRYWEYQYADYVKPGDPRTVSLSAKIDF
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=731, Percent_Identity=23.2558139534884, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1787344, Length=767, Percent_Identity=23.8591916558018, Blast_Score=111, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77047; Mature: 76915
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSLARPPVRPRRVAAALACLAASLAHADDSSGDAAVLPALNITAAHDSPQHLTDTIST CEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHC GALGTRRQLDTPFSTTIVTSEELEARQPYKLGDVFANDASVSDNSGAYSAWASYMTVRGM CCCCCCCCCCCCCCEEEEECHHHHCCCCCCHHHEECCCCCCCCCCCCHHHHHHHHHEECE QLDWQNGYKIDGLPFVTYGITMPYEQLERVELLKGLGGFLYGFVTPGGVVNYVTKQPGAE EEECCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHCHHEEECCCCCCEEEHHHCCCCCC PVRSVDVNYRSTNVWTEHVDLGQRFGPNDMFGARLNATHEEGKTYNDGNIRRDSVSLALQ CHHEEECCEECCCEEEHHHHHHCCCCCCCCCCCEECCCHHCCCEECCCCEEECCEEEEEE ANLTRDLSVSFGALYQDRRTTGQTPSIFTGSYPGGALPATISGGSTNLGGKDQYLNTNLQ ECCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCEECCCEE LYTAGLQYQLAPDWQLDVAYSYSKATRRRNESTLYLQDAAGNYTDSRYVGMEDHRFSQWR EEEECEEEEECCCCEEEEEEEHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHH AMVEGKVRTGPFSHQIVLGASWQKQANDYSANSVFVPLGAGNLYAPNPYRYESPHGFIQY HHHCCCEECCCCCCEEEEECCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE RTSEIVQKSLFASDTVQLTERWSVLAGVRYMNYEQRAFQASGAEDPGYRQNGVVTPTFAV CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHE MFKLAPTTTAYASYAESLEPGSRVNDVYANAGQVLKPLRSKQYELGIKSEHARWSATAAL EEEECCCHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHCCCEECCCCCCCCHHHHHHHH FRIERSAEYANAANVYVQDGESIIQGIEVGARAKFGAHWNAGVDAMLLDAWYANGIGNNG HHHHHCCCCCCCCEEEEECCHHHHHHHHCCCCEECCCCCCCCCCEEEEEHHHHCCCCCCC NRVAGAPRFVLAGDLGYAVPGVPGLTLGVDAKFTGATPLRAAGGLDAPGFLVVNAGARYL CCCCCCCCEEEECCCCCCCCCCCCEEEECCCEECCCCCCHHCCCCCCCCEEEEECCHHHH TRVGRHDVTLRASIDNVLNRRYWEYQYADYVKPGDPRTVSLSAKIDF HHCCCCCEEEEECHHHHHHHHEEEEEHHCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TVSLARPPVRPRRVAAALACLAASLAHADDSSGDAAVLPALNITAAHDSPQHLTDTIST EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHC GALGTRRQLDTPFSTTIVTSEELEARQPYKLGDVFANDASVSDNSGAYSAWASYMTVRGM CCCCCCCCCCCCCCEEEEECHHHHCCCCCCHHHEECCCCCCCCCCCCHHHHHHHHHEECE QLDWQNGYKIDGLPFVTYGITMPYEQLERVELLKGLGGFLYGFVTPGGVVNYVTKQPGAE EEECCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHCHHEEECCCCCCEEEHHHCCCCCC PVRSVDVNYRSTNVWTEHVDLGQRFGPNDMFGARLNATHEEGKTYNDGNIRRDSVSLALQ CHHEEECCEECCCEEEHHHHHHCCCCCCCCCCCEECCCHHCCCEECCCCEEECCEEEEEE ANLTRDLSVSFGALYQDRRTTGQTPSIFTGSYPGGALPATISGGSTNLGGKDQYLNTNLQ ECCCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCEECCCEE LYTAGLQYQLAPDWQLDVAYSYSKATRRRNESTLYLQDAAGNYTDSRYVGMEDHRFSQWR EEEECEEEEECCCCEEEEEEEHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHH AMVEGKVRTGPFSHQIVLGASWQKQANDYSANSVFVPLGAGNLYAPNPYRYESPHGFIQY HHHCCCEECCCCCCEEEEECCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE RTSEIVQKSLFASDTVQLTERWSVLAGVRYMNYEQRAFQASGAEDPGYRQNGVVTPTFAV CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHE MFKLAPTTTAYASYAESLEPGSRVNDVYANAGQVLKPLRSKQYELGIKSEHARWSATAAL EEEECCCHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHCCCEECCCCCCCCHHHHHHHH FRIERSAEYANAANVYVQDGESIIQGIEVGARAKFGAHWNAGVDAMLLDAWYANGIGNNG HHHHHCCCCCCCCEEEEECCHHHHHHHHCCCCEECCCCCCCCCCEEEEEHHHHCCCCCCC NRVAGAPRFVLAGDLGYAVPGVPGLTLGVDAKFTGATPLRAAGGLDAPGFLVVNAGARYL CCCCCCCCEEEECCCCCCCCCCCCEEEECCCEECCCCCCHHCCCCCCCCEEEEECCHHHH TRVGRHDVTLRASIDNVLNRRYWEYQYADYVKPGDPRTVSLSAKIDF HHCCCCCEEEEECHHHHHHHHEEEEEHHCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]