Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688259

Identifier: 116688259

GI number: 116688259

Start: 272584

End: 273405

Strand: Reverse

Name: 116688259

Synonym: Bcen2424_0235

Alternate gene names: NA

Gene position: 273405-272584 (Counterclockwise)

Preceding gene: 116688260

Following gene: 116688258

Centisome position: 7.85

GC content: 54.38

Gene sequence:

>822_bases
ATGAAGTGCATGATTTGCGACGCCGACGGCGACTACTATTTCTCGAAGACCTATACCGAGCGACCTTTTTCCGACTTCAT
GAGTTCGATCGGCAAGGTCGACTATTACAAATGTCGGCAGTGCGGCTTCGTCTGGTCCGGCACACATCAATCGCTACCGG
CGGAGAAATGGAGTGAATTGAATCGGCAGTTTCATCACTACATCGAGAATCCCGCCAACGAAACGAAGGGCAACCAGCCG
CCGTACGCCGAACAGGCCATGATGCTCGCCCTGCTCGGAAAGAACGGCGTGATTCGCCTGGACAACATGGTCGACTATGC
CGCCGGGTACGGTACGTTGAGCAATGTCCTGGCGAAATACTACGATCTTGAACTGCCGATCTTCGATCTCTACGTGAAAA
ACGATGGCTCGGGAAGATATATCGATCCATCCAACCTCGGTCGCTACAAGACCGTGATCAATTCGGCGATGTTCGAGCAT
GTCCTGCGCCGCAGCGATCTCGATTTCGTGCATGACATGGTCGATCACGACGGTGCATTGGTCATCCACACGGTTGTCTG
TGAACGCGTGCCGAACGACCCGGAATGGTTCTACTTGCGCCCCCCCGTGCATACCGCCTTTCATACCAATCGAAGCATGA
CCATCCTGATGGAGCAATGGGGCTATCGGGCATCGCTCTACTGTCCTCAGGCCAAGTGCTGGGTTCTGCTTCGCGACGAG
TGCGCACATATCGGCGAAACGGTTGCATCCATCAATCGCGAACTCCAGACCACGTGGTTCCACTACAAGGAAGGATTCGT
CGACTACTGGAAGGGATTCTAG

Upstream 100 bases:

>100_bases
CGCTCGAACCGGGTACGTTCGAAGCCCGGTGTCACTGAACACGGCTCCGCGACCAGGCGGCCGCCTATCGCATCACTCAG
CAGAAAGAGAGCGCGACAAA

Downstream 100 bases:

>100_bases
ATCAGCCTGCATGTGACGAAATGCATCGATGCCCCGTCCTTCACGTGAGCTGACAGGACGACCCGCGCATACCGGCCGGC
AATGCGTGGCCGCGAGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKCMICDADGDYYFSKTYTERPFSDFMSSIGKVDYYKCRQCGFVWSGTHQSLPAEKWSELNRQFHHYIENPANETKGNQP
PYAEQAMMLALLGKNGVIRLDNMVDYAAGYGTLSNVLAKYYDLELPIFDLYVKNDGSGRYIDPSNLGRYKTVINSAMFEH
VLRRSDLDFVHDMVDHDGALVIHTVVCERVPNDPEWFYLRPPVHTAFHTNRSMTILMEQWGYRASLYCPQAKCWVLLRDE
CAHIGETVASINRELQTTWFHYKEGFVDYWKGF

Sequences:

>Translated_273_residues
MKCMICDADGDYYFSKTYTERPFSDFMSSIGKVDYYKCRQCGFVWSGTHQSLPAEKWSELNRQFHHYIENPANETKGNQP
PYAEQAMMLALLGKNGVIRLDNMVDYAAGYGTLSNVLAKYYDLELPIFDLYVKNDGSGRYIDPSNLGRYKTVINSAMFEH
VLRRSDLDFVHDMVDHDGALVIHTVVCERVPNDPEWFYLRPPVHTAFHTNRSMTILMEQWGYRASLYCPQAKCWVLLRDE
CAHIGETVASINRELQTTWFHYKEGFVDYWKGF
>Mature_273_residues
MKCMICDADGDYYFSKTYTERPFSDFMSSIGKVDYYKCRQCGFVWSGTHQSLPAEKWSELNRQFHHYIENPANETKGNQP
PYAEQAMMLALLGKNGVIRLDNMVDYAAGYGTLSNVLAKYYDLELPIFDLYVKNDGSGRYIDPSNLGRYKTVINSAMFEH
VLRRSDLDFVHDMVDHDGALVIHTVVCERVPNDPEWFYLRPPVHTAFHTNRSMTILMEQWGYRASLYCPQAKCWVLLRDE
CAHIGETVASINRELQTTWFHYKEGFVDYWKGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31764; Mature: 31764

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCMICDADGDYYFSKTYTERPFSDFMSSIGKVDYYKCRQCGFVWSGTHQSLPAEKWSEL
CEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHCCCEECCCCCCCCHHHHHHH
NRQFHHYIENPANETKGNQPPYAEQAMMLALLGKNGVIRLDNMVDYAAGYGTLSNVLAKY
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHCHHHHHHHHHHH
YDLELPIFDLYVKNDGSGRYIDPSNLGRYKTVINSAMFEHVLRRSDLDFVHDMVDHDGAL
HCCCCCEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCE
VIHTVVCERVPNDPEWFYLRPPVHTAFHTNRSMTILMEQWGYRASLYCPQAKCWVLLRDE
EEEEHHHHHCCCCCCEEEECCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCEEEEEHHH
CAHIGETVASINRELQTTWFHYKEGFVDYWKGF
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC
>Mature Secondary Structure
MKCMICDADGDYYFSKTYTERPFSDFMSSIGKVDYYKCRQCGFVWSGTHQSLPAEKWSEL
CEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHCCCEECCCCCCCCHHHHHHH
NRQFHHYIENPANETKGNQPPYAEQAMMLALLGKNGVIRLDNMVDYAAGYGTLSNVLAKY
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHCHHHHHHHHHHH
YDLELPIFDLYVKNDGSGRYIDPSNLGRYKTVINSAMFEHVLRRSDLDFVHDMVDHDGAL
HCCCCCEEEEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCE
VIHTVVCERVPNDPEWFYLRPPVHTAFHTNRSMTILMEQWGYRASLYCPQAKCWVLLRDE
EEEEHHHHHCCCCCCEEEECCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCEEEEEHHH
CAHIGETVASINRELQTTWFHYKEGFVDYWKGF
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA