Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688257

Identifier: 116688257

GI number: 116688257

Start: 270816

End: 271568

Strand: Direct

Name: 116688257

Synonym: Bcen2424_0233

Alternate gene names: NA

Gene position: 270816-271568 (Clockwise)

Preceding gene: 116688256

Following gene: 116688266

Centisome position: 7.77

GC content: 56.04

Gene sequence:

>753_bases
ATGAAAGTCGCGATCATGCAACCGTATTTCCTGCCGTATATCGGCTACTTTCAACTGATTGGAGCGGTTGACCGGTTTGT
TGTATACGACAACATCAAGTACACGAAGAAGGGGTGGTTCAACCGGAACCGCTTCCTGCTCAACGGCAGCGATGCGCTGT
TCAGTATTCCGCTGAAACGAGATGCCGATTCGCTCGATGTTCGTGATCGCGAGGTGTCGTCTGATTACGATCCCGTGAAA
CTTGCCGCCCAGTTGAAGGGAGCCTATGTTCGTGCGCCGTTCTTTGAGCAAGGATTCAACCTCGTGAGCGCCGTGATCGA
CGCTGACGAGCCGAACCTGTTCAAGTTCATCAAGCGATCGATCGATGTCGTCGTGGATCGGCTCGGCATCGCCACGCGTA
TCGATGTGTCGTCGTCGATCGACGTTGATCCGTCATTGAAGGGGCAGAGTCGCGTACTCGCGATCTGCGAGTCGCTGGGG
GCGACGACGTATGTCAATGCGATCGGCGGTGTTGATTTGTACTCGCACGAAGACTTTGCGGCGCGCGGCATTGATCTGCG
GTTTCTTCGGTCGAGGCCGATCGAATACGGTCAGTTCGGGGCGCCGTTCGTTCCCTGGCTGTCGATCGTGGACCTGCTGA
TGTTCAACTCCGTTGCGGAAGTAAGGGACATGCTGACGGAATACGATTTGATTCAGGCAGTCCCTGCGAACGGGGTCGCG
ATGCCCGATACGGTGCAGCAGGTATCGGGGTGA

Upstream 100 bases:

>100_bases
TGCCGCGCATTTCAGGGAGTGCGTCGATGCGTAGCCTGTTTGGCATGCCGCGCCGCTCTCCAGCCATTTTTTGTGCCGTT
TGTCCGTCAGGGGTGAGGCG

Downstream 100 bases:

>100_bases
CCGGTCACGGCCGTGTCCTGTCGGGGACGCGGCCGTTCGAGCGGCTGGCCTTGCTTGTGCAGGTAGGGCGATACGCACGC
GCGCTGCGTGCGCCGTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKVAIMQPYFLPYIGYFQLIGAVDRFVVYDNIKYTKKGWFNRNRFLLNGSDALFSIPLKRDADSLDVRDREVSSDYDPVK
LAAQLKGAYVRAPFFEQGFNLVSAVIDADEPNLFKFIKRSIDVVVDRLGIATRIDVSSSIDVDPSLKGQSRVLAICESLG
ATTYVNAIGGVDLYSHEDFAARGIDLRFLRSRPIEYGQFGAPFVPWLSIVDLLMFNSVAEVRDMLTEYDLIQAVPANGVA
MPDTVQQVSG

Sequences:

>Translated_250_residues
MKVAIMQPYFLPYIGYFQLIGAVDRFVVYDNIKYTKKGWFNRNRFLLNGSDALFSIPLKRDADSLDVRDREVSSDYDPVK
LAAQLKGAYVRAPFFEQGFNLVSAVIDADEPNLFKFIKRSIDVVVDRLGIATRIDVSSSIDVDPSLKGQSRVLAICESLG
ATTYVNAIGGVDLYSHEDFAARGIDLRFLRSRPIEYGQFGAPFVPWLSIVDLLMFNSVAEVRDMLTEYDLIQAVPANGVA
MPDTVQQVSG
>Mature_250_residues
MKVAIMQPYFLPYIGYFQLIGAVDRFVVYDNIKYTKKGWFNRNRFLLNGSDALFSIPLKRDADSLDVRDREVSSDYDPVK
LAAQLKGAYVRAPFFEQGFNLVSAVIDADEPNLFKFIKRSIDVVVDRLGIATRIDVSSSIDVDPSLKGQSRVLAICESLG
ATTYVNAIGGVDLYSHEDFAARGIDLRFLRSRPIEYGQFGAPFVPWLSIVDLLMFNSVAEVRDMLTEYDLIQAVPANGVA
MPDTVQQVSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014985 [H]

Pfam domain/function: PF08889 WbqC [H]

EC number: NA

Molecular weight: Translated: 27926; Mature: 27926

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIMQPYFLPYIGYFQLIGAVDRFVVYDNIKYTKKGWFNRNRFLLNGSDALFSIPLKR
CEEEEECCHHHHHHHHHHHHHHHHHEEEECCCEECCCCCCCCCEEEEECCCCEEECCCCC
DADSLDVRDREVSSDYDPVKLAAQLKGAYVRAPFFEQGFNLVSAVIDADEPNLFKFIKRS
CCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHH
IDVVVDRLGIATRIDVSSSIDVDPSLKGQSRVLAICESLGATTYVNAIGGVDLYSHEDFA
HHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHH
ARGIDLRFLRSRPIEYGQFGAPFVPWLSIVDLLMFNSVAEVRDMLTEYDLIQAVPANGVA
HCCCCEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
MPDTVQQVSG
CCHHHHHHCC
>Mature Secondary Structure
MKVAIMQPYFLPYIGYFQLIGAVDRFVVYDNIKYTKKGWFNRNRFLLNGSDALFSIPLKR
CEEEEECCHHHHHHHHHHHHHHHHHEEEECCCEECCCCCCCCCEEEEECCCCEEECCCCC
DADSLDVRDREVSSDYDPVKLAAQLKGAYVRAPFFEQGFNLVSAVIDADEPNLFKFIKRS
CCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHH
IDVVVDRLGIATRIDVSSSIDVDPSLKGQSRVLAICESLGATTYVNAIGGVDLYSHEDFA
HHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHH
ARGIDLRFLRSRPIEYGQFGAPFVPWLSIVDLLMFNSVAEVRDMLTEYDLIQAVPANGVA
HCCCCEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
MPDTVQQVSG
CCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]