Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688249

Identifier: 116688249

GI number: 116688249

Start: 262509

End: 262820

Strand: Direct

Name: 116688249

Synonym: Bcen2424_0225

Alternate gene names: NA

Gene position: 262509-262820 (Clockwise)

Preceding gene: 116688245

Following gene: 116688251

Centisome position: 7.53

GC content: 56.09

Gene sequence:

>312_bases
GTGCGCCGTGCGTCCGGACGGTACTTGCGGATGCAGCGCAAGGTGTGCGTATCGAGCGGCCCAGAGTATTACCTCGACAG
ACATCAACGAGAGACGTGGCAGCCCGCACCACACGACGTCGCGGGCGCGCTTTTCCGACACATCTACGAGCTTGAATCCG
AGCCGGCCGATGTACGCCATGCAATACGACAGAATGACTGCAATCTTCGAGTTGCTCGAGTTGATGTAGGAGTCAAGCCG
AGTGATGATTTCAAGGAACAACTTCTGCAGGTCATCGCATTCACGCGGGTTCGCCGTCTAGATTTCCTTTAA

Upstream 100 bases:

>100_bases
CAGCGTTCTCGTGAACAACACGCGCAGGGAAGCCGAATAACCGTCACGGCCGCTCGGATGCTGGGCGTCGTCACCGAAAG
AACAGGACGGACGGTGCTAC

Downstream 100 bases:

>100_bases
CTTCCGGCGAGGCGCCGCGTTGAAATTGCGACGCTCTCGCCAGCCAGGGGTGTGTGAGTGTGCGTGTTAGCAGGCCCGTC
ATGCGGTGCGACGTCCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MRRASGRYLRMQRKVCVSSGPEYYLDRHQRETWQPAPHDVAGALFRHIYELESEPADVRHAIRQNDCNLRVARVDVGVKP
SDDFKEQLLQVIAFTRVRRLDFL

Sequences:

>Translated_103_residues
MRRASGRYLRMQRKVCVSSGPEYYLDRHQRETWQPAPHDVAGALFRHIYELESEPADVRHAIRQNDCNLRVARVDVGVKP
SDDFKEQLLQVIAFTRVRRLDFL
>Mature_103_residues
MRRASGRYLRMQRKVCVSSGPEYYLDRHQRETWQPAPHDVAGALFRHIYELESEPADVRHAIRQNDCNLRVARVDVGVKP
SDDFKEQLLQVIAFTRVRRLDFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12152; Mature: 12152

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRASGRYLRMQRKVCVSSGPEYYLDRHQRETWQPAPHDVAGALFRHIYELESEPADVRH
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
AIRQNDCNLRVARVDVGVKPSDDFKEQLLQVIAFTRVRRLDFL
HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRASGRYLRMQRKVCVSSGPEYYLDRHQRETWQPAPHDVAGALFRHIYELESEPADVRH
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
AIRQNDCNLRVARVDVGVKPSDDFKEQLLQVIAFTRVRRLDFL
HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA