Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688245

Identifier: 116688245

GI number: 116688245

Start: 252818

End: 255043

Strand: Direct

Name: 116688245

Synonym: Bcen2424_0221

Alternate gene names: NA

Gene position: 252818-255043 (Clockwise)

Preceding gene: 116688244

Following gene: 116688249

Centisome position: 7.26

GC content: 58.81

Gene sequence:

>2226_bases
ATGGCAACTCGCAAGGGTTTCTTGGATGCCGAGGGCGAAGAAAAAACGCTCAGCGCACCGACGATGGCGCGGTCCCGGGG
ACAACTCGGTTCTGCTTACGCACCCGGCGCCTTCTTCACCTTTGAGGGCGGTCTTGGCGCTTGCATTTCCTTGCCGGACT
TCTCGTCAATGGTCGACGACGCTCCGATTCACTCGACCACGAAGGCACAAATCATTTTGCGACTTCAGGAGGTCTGGCAG
AGTTGGTTTGCGCGGTCTTACGCGGTGGGCATCGGAAACCAGCAAATCGACCCCCGCCAGTGCCTGGATGAGGCGCTTCT
CGGAGGTGCCACCGTCGTGCCTCTGGGTGCAGACCGGCTCGCGTTCCTGAGTCCGCTACGCATGGGATATGCTCCGGCGC
CGCTGACTTTCGTGTGCAATAAGTGCCGACTCTTCAGGCGCTTCGAATCAGCGCACGACCTGGCGCAAAATATCATCCGT
CTACGCAAAACCCAGTGCGGTGCGGCTGATGGGAAAGGGCTGTGCCAGTGGCGCCAACTGGACGTCATTTTCGTGCACTG
GTCGGGCGAGTGGATGCCAGCGACTCCCGGTCGATGGGAGTGGGATGACCGCAAGAACGACCTGAGGCTTTCCGGCGAAG
AGTGCAGCGTATGTGGCAAGAGGGACTTCAAGCTGAATACGGACTCGCCGCGCATCGGTCAGTGGCACTTCTACTGTGCC
AATCCAACCTGTGGGCATAAAGGTTCTGATGAGTGGCGCCAGAACGACCAGTTTACGACGGAGGTGTTCAGGGACACGGC
TAATAGGCGCGTGAGCGAGCGTCGTATGGAACCTATCTCATACCGAGCCTCTTCGGCCTACTATGCACAATCCGAGCAGT
TCGTCCTGTTTTCGCAGTCCGAGCACCATTTGCTGGAGATGCTCGAGCCGCAACGACAGTCGGAACTTGCCGCATTTATC
GGCAAGCGGTTTCGGTTTGAGGGCGGTGAACTAACCTCTGACGAGATGAAAGCAGCGCTGCTGGCGGGTGGGAAAGCTGG
CGAGTGGGAGACGTACGAGAACCTTTCGCGCATCTGTGAGCTAGCCCGGGGAATGGACGACAAGGGCCCACAGGAGATGG
CTGAAAAGGAACTCAAGAAACTCATCGACCGATGGACTACAAGCGACCCGCCGCTCGTACCACCGCGTGTTGTCCTGCCG
CCAGGAATCCACGCACAGCTGACCGCTCGCAGTGAGTACACAAGCCGCTTCGACCCTTTCGTTCTGACGGTAGAGCACGA
GGCACTCAACCGGGGCAAGCTCTCCGCTGCGCCCGACGGTGGTCGGGCTAAGTTCGTGCGCTTTAACCATCTCGACAACG
ACCTCGCCCCCAAAGACGCCAGTGTTAAGGCAGCCCAAGAAGCTCAGACGCAGCATTTGATGACAAAGCTCGGCATGGCC
GACTTGGGCCTGATTCGCGAGTTTGACCTGTGTCGCTTCACGCACGGCTACACGCGAGTTAGCGCGACGCCGACCTTGGA
GAAGCGGAACCAATTGATGCCTGTACGCTTGCGCCTGTTCGACCCGCTGCGTAACGGCAAACGACCCATCTACGTCGTAA
CGCAAGCCAACGAAGCGTTATATGTGCGCCTCGACCCTCGCGCGGTTTATAGGTGGTTGCAGTCCGTCGGCGTCGTTGAC
CTGCCAGATTGGGACGAGAGCGGCATTGTTAAACTTGGCGGAAAGATTCTGGAGGTCGCGCAGCCTTTTGGGCGGTACTT
CTCTTTGCTCAAGGAGGGCGATGCCGCAACCTATCGCTACGTCTACACGTTGCTCCATACCTACGCTCACTCCATCATGA
AGAGCGTGGCTGAGCTTTCTGGTCTGGACTTGGGCTCGATGGGAGAGTATCTCTTTCCGTTGGACTTGGCGTTCGTCGTT
TACCGAAACGGTACGACTATGGACCTGGGCAACCTTTCGTCGCTGTGGCGTAACGAGAACAACCGGTTCCTGTCTCGCTT
GCTCGAGCCGTCCACGCATCGCTGCAATTCGGGCCGCCTCTGTGACACGGCCGGCGGGGCCTGCCCTGACTGCATCATGA
TTCCCGAGACATCATGCCTTGCACAGAATCAGTTGCTGTCTCGCGCGGTTCTCAAAGGCGGCCCACCGCCGCGCGAGGAC
ACCACACACAGGGGCAAGCGAATCCCCGGTTTTCTTGAGGTGGTTAACGAAGGGATTGCGGACTGA

Upstream 100 bases:

>100_bases
AAGACCCAGACGCCCGGCGAGGTTCTGCTGGTGATGGACCTAGTCCGTCACGGCGTGGCTAACAACGACGGTGCGGATAA
CGCACAAACGGGGGACTGAG

Downstream 100 bases:

>100_bases
ACGGCTGAACGCGTTCGACATGTTGACCTCTCACTCTGAGGTGACCGCTGCTCTATGCGTGGAGGCCGCTCGACGGTCGC
GGGACCTACCCGCGACCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 741; Mature: 740

Protein sequence:

>741_residues
MATRKGFLDAEGEEKTLSAPTMARSRGQLGSAYAPGAFFTFEGGLGACISLPDFSSMVDDAPIHSTTKAQIILRLQEVWQ
SWFARSYAVGIGNQQIDPRQCLDEALLGGATVVPLGADRLAFLSPLRMGYAPAPLTFVCNKCRLFRRFESAHDLAQNIIR
LRKTQCGAADGKGLCQWRQLDVIFVHWSGEWMPATPGRWEWDDRKNDLRLSGEECSVCGKRDFKLNTDSPRIGQWHFYCA
NPTCGHKGSDEWRQNDQFTTEVFRDTANRRVSERRMEPISYRASSAYYAQSEQFVLFSQSEHHLLEMLEPQRQSELAAFI
GKRFRFEGGELTSDEMKAALLAGGKAGEWETYENLSRICELARGMDDKGPQEMAEKELKKLIDRWTTSDPPLVPPRVVLP
PGIHAQLTARSEYTSRFDPFVLTVEHEALNRGKLSAAPDGGRAKFVRFNHLDNDLAPKDASVKAAQEAQTQHLMTKLGMA
DLGLIREFDLCRFTHGYTRVSATPTLEKRNQLMPVRLRLFDPLRNGKRPIYVVTQANEALYVRLDPRAVYRWLQSVGVVD
LPDWDESGIVKLGGKILEVAQPFGRYFSLLKEGDAATYRYVYTLLHTYAHSIMKSVAELSGLDLGSMGEYLFPLDLAFVV
YRNGTTMDLGNLSSLWRNENNRFLSRLLEPSTHRCNSGRLCDTAGGACPDCIMIPETSCLAQNQLLSRAVLKGGPPPRED
TTHRGKRIPGFLEVVNEGIAD

Sequences:

>Translated_741_residues
MATRKGFLDAEGEEKTLSAPTMARSRGQLGSAYAPGAFFTFEGGLGACISLPDFSSMVDDAPIHSTTKAQIILRLQEVWQ
SWFARSYAVGIGNQQIDPRQCLDEALLGGATVVPLGADRLAFLSPLRMGYAPAPLTFVCNKCRLFRRFESAHDLAQNIIR
LRKTQCGAADGKGLCQWRQLDVIFVHWSGEWMPATPGRWEWDDRKNDLRLSGEECSVCGKRDFKLNTDSPRIGQWHFYCA
NPTCGHKGSDEWRQNDQFTTEVFRDTANRRVSERRMEPISYRASSAYYAQSEQFVLFSQSEHHLLEMLEPQRQSELAAFI
GKRFRFEGGELTSDEMKAALLAGGKAGEWETYENLSRICELARGMDDKGPQEMAEKELKKLIDRWTTSDPPLVPPRVVLP
PGIHAQLTARSEYTSRFDPFVLTVEHEALNRGKLSAAPDGGRAKFVRFNHLDNDLAPKDASVKAAQEAQTQHLMTKLGMA
DLGLIREFDLCRFTHGYTRVSATPTLEKRNQLMPVRLRLFDPLRNGKRPIYVVTQANEALYVRLDPRAVYRWLQSVGVVD
LPDWDESGIVKLGGKILEVAQPFGRYFSLLKEGDAATYRYVYTLLHTYAHSIMKSVAELSGLDLGSMGEYLFPLDLAFVV
YRNGTTMDLGNLSSLWRNENNRFLSRLLEPSTHRCNSGRLCDTAGGACPDCIMIPETSCLAQNQLLSRAVLKGGPPPRED
TTHRGKRIPGFLEVVNEGIAD
>Mature_740_residues
ATRKGFLDAEGEEKTLSAPTMARSRGQLGSAYAPGAFFTFEGGLGACISLPDFSSMVDDAPIHSTTKAQIILRLQEVWQS
WFARSYAVGIGNQQIDPRQCLDEALLGGATVVPLGADRLAFLSPLRMGYAPAPLTFVCNKCRLFRRFESAHDLAQNIIRL
RKTQCGAADGKGLCQWRQLDVIFVHWSGEWMPATPGRWEWDDRKNDLRLSGEECSVCGKRDFKLNTDSPRIGQWHFYCAN
PTCGHKGSDEWRQNDQFTTEVFRDTANRRVSERRMEPISYRASSAYYAQSEQFVLFSQSEHHLLEMLEPQRQSELAAFIG
KRFRFEGGELTSDEMKAALLAGGKAGEWETYENLSRICELARGMDDKGPQEMAEKELKKLIDRWTTSDPPLVPPRVVLPP
GIHAQLTARSEYTSRFDPFVLTVEHEALNRGKLSAAPDGGRAKFVRFNHLDNDLAPKDASVKAAQEAQTQHLMTKLGMAD
LGLIREFDLCRFTHGYTRVSATPTLEKRNQLMPVRLRLFDPLRNGKRPIYVVTQANEALYVRLDPRAVYRWLQSVGVVDL
PDWDESGIVKLGGKILEVAQPFGRYFSLLKEGDAATYRYVYTLLHTYAHSIMKSVAELSGLDLGSMGEYLFPLDLAFVVY
RNGTTMDLGNLSSLWRNENNRFLSRLLEPSTHRCNSGRLCDTAGGACPDCIMIPETSCLAQNQLLSRAVLKGGPPPREDT
THRGKRIPGFLEVVNEGIAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83138; Mature: 83007

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRKGFLDAEGEEKTLSAPTMARSRGQLGSAYAPGAFFTFEGGLGACISLPDFSSMVDD
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHCC
APIHSTTKAQIILRLQEVWQSWFARSYAVGIGNQQIDPRQCLDEALLGGATVVPLGADRL
CCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCEEEECCCHHH
AFLSPLRMGYAPAPLTFVCNKCRLFRRFESAHDLAQNIIRLRKTQCGAADGKGLCQWRQL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
DVIFVHWSGEWMPATPGRWEWDDRKNDLRLSGEECSVCGKRDFKLNTDSPRIGQWHFYCA
EEEEEEECCCEECCCCCCCCCCCCCCCEEECCCHHCCCCCCCCEECCCCCCCCCEEEEEC
NPTCGHKGSDEWRQNDQFTTEVFRDTANRRVSERRMEPISYRASSAYYAQSEQFVLFSQS
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEECCCEEEEEECC
EHHLLEMLEPQRQSELAAFIGKRFRFEGGELTSDEMKAALLAGGKAGEWETYENLSRICE
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LARGMDDKGPQEMAEKELKKLIDRWTTSDPPLVPPRVVLPPGIHAQLTARSEYTSRFDPF
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECHHHHCCCCCE
VLTVEHEALNRGKLSAAPDGGRAKFVRFNHLDNDLAPKDASVKAAQEAQTQHLMTKLGMA
EEEEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCHH
DLGLIREFDLCRFTHGYTRVSATPTLEKRNQLMPVRLRLFDPLRNGKRPIYVVTQANEAL
HHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCEEHHEEHHHHHCCCCCEEEEEECCCEE
YVRLDPRAVYRWLQSVGVVDLPDWDESGIVKLGGKILEVAQPFGRYFSLLKEGDAATYRY
EEEECHHHHHHHHHHCCCEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHH
VYTLLHTYAHSIMKSVAELSGLDLGSMGEYLFPLDLAFVVYRNGTTMDLGNLSSLWRNEN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEEEECCCEECCCCHHHHHHCCC
NRFLSRLLEPSTHRCNSGRLCDTAGGACPDCIMIPETSCLAQNQLLSRAVLKGGPPPRED
HHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
TTHRGKRIPGFLEVVNEGIAD
CCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ATRKGFLDAEGEEKTLSAPTMARSRGQLGSAYAPGAFFTFEGGLGACISLPDFSSMVDD
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHCC
APIHSTTKAQIILRLQEVWQSWFARSYAVGIGNQQIDPRQCLDEALLGGATVVPLGADRL
CCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCEEEECCCHHH
AFLSPLRMGYAPAPLTFVCNKCRLFRRFESAHDLAQNIIRLRKTQCGAADGKGLCQWRQL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
DVIFVHWSGEWMPATPGRWEWDDRKNDLRLSGEECSVCGKRDFKLNTDSPRIGQWHFYCA
EEEEEEECCCEECCCCCCCCCCCCCCCEEECCCHHCCCCCCCCEECCCCCCCCCEEEEEC
NPTCGHKGSDEWRQNDQFTTEVFRDTANRRVSERRMEPISYRASSAYYAQSEQFVLFSQS
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEECCCEEEEEECC
EHHLLEMLEPQRQSELAAFIGKRFRFEGGELTSDEMKAALLAGGKAGEWETYENLSRICE
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LARGMDDKGPQEMAEKELKKLIDRWTTSDPPLVPPRVVLPPGIHAQLTARSEYTSRFDPF
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECHHHHCCCCCE
VLTVEHEALNRGKLSAAPDGGRAKFVRFNHLDNDLAPKDASVKAAQEAQTQHLMTKLGMA
EEEEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCHH
DLGLIREFDLCRFTHGYTRVSATPTLEKRNQLMPVRLRLFDPLRNGKRPIYVVTQANEAL
HHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCEEHHEEHHHHHCCCCCEEEEEECCCEE
YVRLDPRAVYRWLQSVGVVDLPDWDESGIVKLGGKILEVAQPFGRYFSLLKEGDAATYRY
EEEECHHHHHHHHHHCCCEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHH
VYTLLHTYAHSIMKSVAELSGLDLGSMGEYLFPLDLAFVVYRNGTTMDLGNLSSLWRNEN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEEEECCCEECCCCHHHHHHCCC
NRFLSRLLEPSTHRCNSGRLCDTAGGACPDCIMIPETSCLAQNQLLSRAVLKGGPPPRED
HHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
TTHRGKRIPGFLEVVNEGIAD
CCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA