Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688240

Identifier: 116688240

GI number: 116688240

Start: 242993

End: 243385

Strand: Direct

Name: 116688240

Synonym: Bcen2424_0216

Alternate gene names: NA

Gene position: 242993-243385 (Clockwise)

Preceding gene: 116688239

Following gene: 116688241

Centisome position: 6.97

GC content: 56.49

Gene sequence:

>393_bases
ATGCGCTTGCACCAGCTGTGCAGACGGCTGCTCGGACTTCAGATGAAGGAGGCCGCTATGGCCTTGTGGAACATCGCGTC
AGTAATGTCCCAGCCCGAGGTTTCTATCGCTAGGTGGCGAGTTCTGGAAATCGATGCCGGGACCAGGCACTTCGTCGGAG
CGGACGAGCGAGATTTTAGTGGCCGCGTCAGTTCTGCAATCGTGGCATTCGACTACAAAATGTTGCGGGGCCGCACGCGG
TCAGGCCGAGTCTATCAGCTGGTGGGCCTTCCAGGACACTCGACCAACGCCGACTATGTTTGGCAGCATTGGTGTGCTAT
TAACGATGTAAAGTCGTTCTCAGACGTGACGAAGCAACTGCTTGCAGGCATAGCCGATGACAACCGCACATGA

Upstream 100 bases:

>100_bases
GCCACGCCCCCGAGATGCGACTTTCGTGTTCGACGCAGCATGCTCGTCTGCAAGGCCTAGGAAGCTCTCTGGCTTGGGGC
CGGTCGCAAACTGGAAATCC

Downstream 100 bases:

>100_bases
ACGAACAAAATCGGTCATCGAGACGCGCGAGTTTTTGCAGCTGCTTGCATCTTCCGATGACGATGTCACCCACGCCCGTA
TTCGGTTGGTTGCGGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRLHQLCRRLLGLQMKEAAMALWNIASVMSQPEVSIARWRVLEIDAGTRHFVGADERDFSGRVSSAIVAFDYKMLRGRTR
SGRVYQLVGLPGHSTNADYVWQHWCAINDVKSFSDVTKQLLAGIADDNRT

Sequences:

>Translated_130_residues
MRLHQLCRRLLGLQMKEAAMALWNIASVMSQPEVSIARWRVLEIDAGTRHFVGADERDFSGRVSSAIVAFDYKMLRGRTR
SGRVYQLVGLPGHSTNADYVWQHWCAINDVKSFSDVTKQLLAGIADDNRT
>Mature_130_residues
MRLHQLCRRLLGLQMKEAAMALWNIASVMSQPEVSIARWRVLEIDAGTRHFVGADERDFSGRVSSAIVAFDYKMLRGRTR
SGRVYQLVGLPGHSTNADYVWQHWCAINDVKSFSDVTKQLLAGIADDNRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14708; Mature: 14708

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLHQLCRRLLGLQMKEAAMALWNIASVMSQPEVSIARWRVLEIDAGTRHFVGADERDFS
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC
GRVSSAIVAFDYKMLRGRTRSGRVYQLVGLPGHSTNADYVWQHWCAINDVKSFSDVTKQL
CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAGIADDNRT
HHHHCCCCCC
>Mature Secondary Structure
MRLHQLCRRLLGLQMKEAAMALWNIASVMSQPEVSIARWRVLEIDAGTRHFVGADERDFS
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC
GRVSSAIVAFDYKMLRGRTRSGRVYQLVGLPGHSTNADYVWQHWCAINDVKSFSDVTKQL
CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAGIADDNRT
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA