The gene/protein map for NC_004088 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688230

Identifier: 116688230

GI number: 116688230

Start: 227557

End: 229626

Strand: Direct

Name: 116688230

Synonym: Bcen2424_0206

Alternate gene names: NA

Gene position: 227557-229626 (Clockwise)

Preceding gene: 116688222

Following gene: 116688231

Centisome position: 6.53

GC content: 55.75

Gene sequence:

>2070_bases
ATGAAGCTGCGTCATGTTCAGATAAAGAACTTCCGTCTTCTCTCGGATGTTGATCTTGCTTTGGAAGATCTCACGACAGT
CGTTGTGGGTCGCAACAACAGCGGCAAGACGTCGCTCTCTGAAGTCATCCGACGGCTACTCGCCGACGGCAGTGCACAGT
TTCAGCTTGAAGACTTCTCCAGCGCCTGCTATGAGGGCTTTCGTCTAGCTTGGGAGGCTCGGAGCAACGACGAACACGAC
GATATCGTCCGGGCGCTCATCCCCTACATCGAGCTGCGACTGACTTTCCAGTACGATCCGAATCAGCCGCAATTGGGACC
GCTGAGTCCTTTTGTTATCGACCTCGACCCTGACTGCACCGAGGCGCTTGTTGTTGTCCGCTACGAGCTGAAAGACGGTC
AGCTTTCCCAGCTTTTTGATGGTTTGCCACCGACGCCGTTGTCTGCCGAAGCTCGGTTAACGTTCTTTCGTACGTTGCGC
GATCGAATACCAGGCAATTATGCGACGCGCATATGGGCAGAAGACCCCAATGACGCTGGAAACCAGCGCCAGCTCCTTCC
CAACGCAGTGAAGGGTCTGGTCAAAACGGGTTTCATCAACGCGCAACGTGGCCTTGACGACGTCACGTCACGAGAGTCGG
ACGTTCTTGCCAAGACTGTCGAGCTTCTTTTCGCAACGGCGTCATCGGCGTCGGCAGATGCGGCCGACAAACAGATCGCA
GATTCCCTGACTGATGCCGTCCAGGGCATTCAATCGCAGATTGATACAAACTTCGGCGGACAGCTAAAGGGATTGATCCC
TGCCTTGAAGAGCTTTGGCTACCCTGGACTAGGTAATCAGGAGCTGCATACCGAGACCCTTCTTGATGTGCGAAAGCTGT
TGTCCAATTTCACGAAAGTCCGTTACGCCGGCTACAGCGGTGTCGCGTTGCCTGAATCGTACAACGGCCTCGGTGCGCGC
AATCTGATCTTCATTCTCTTGCAGTTAGCCGGGTTCTACAAAGCCTATCGCGCCGAAGCGACGGCCCCAGGCATCCACCT
CATTTTCATCGAGGAGCCCGAGGCGCATCTGCATCCCCAGATGCAGGAGGTATTCATCCGGCAACTCGCCAAAACGGCCC
AATTGCTGGTGGACAGTACAGAAGACAAGACCCCCTGGCCGGTTCAGTTCGTCGTTTCTACGCATTCGTCACACGTCGCA
AACGAAGCGGGCTTCGAAAGTATTCGTTACTTCCTCGGACGAGATGTGTCTGGAGCGCAACCCGGCGTCCGGCAGACGAT
GATCAAGGATCTGCGCAGAGGGCTGGATGGCGTTTCTGAGCCTGACAAGAAATTCCTTCACCAGTACATGACACTGACGC
GTTGTGATCTCTTTTTTGCAGACAAGGCCATTCTGGTTGAAGGCTTGAGCGAACGTCTTCTATTGCCGGTCCTCGTCGGA
AAACTCGAAGAGGCTGAGCCCAACTCCCCGAAGTTGTCCAGCCAGTACGTCACCACGATCGAAGTGGGTGGCGCATACGC
GCATTTGTTCTTCAAGCTTCTACACTTCCTCGAGCTCCGCAGTTTGATAATCACCGACCTTGACGCCGTGGAAAAAGCGG
GCGGTTCGGCGTGCGAGGTCCACAAAGGAACGTATTCAAGCAACGCTTGCCTGAAGGCGTGGTTCTCGGATGACGACCCG
TTCACTCTCGCGGGACTTTTGGCCAAGGGCGAGGCCGAGAAAATAAAAGAGGGCAATCGCATCGCCTATCAATGTGCGGA
AGCGGAAGGTGGTCCATGTGGACGGACGTTCGAGGACGCCTTCATCCTCTCAAATCGGGCGCTGTTTGGGCTGACGGGCA
ATACCAGGGAAGAGTTGGAGGTTGCCGCTCGTAGCAAGGCAGGAGAATTCAAGAAATCGGACTTCGCGCTCAGGTATGCC
ATCGAGGAGAAAGGGTGGAGTGCTCCGAAGTATCTTGTCGACGGCGTGCGATGGCTAGCGGCCGGCATCGAACCTGACCA
GTCCGATCCTGCGCTGGCTTTAGCAGCGGACGTTATCGTTGCGAAGGCGGAGGCCGCTCCTCATGGCTGA

Upstream 100 bases:

>100_bases
GCATTAAAAAACTATCTCTAGATCGATCGCGCTCAGCCTGGGGCATTTATGAACTACCATACTCAAAATCAACGCTTCAA
ATAGCGAATTCGGGGAATAA

Downstream 100 bases:

>100_bases
TATCCAATCTCCGGCCGAGCTGGCGAGTCAATGTGCCCTCGACGCAATGTTTCAATGCCTGGATGAAGGACGGAGTTTCC
GGCTCGAAGCCGGCGCTGGT

Product: ATP-dependent OLD family endonuclease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 689; Mature: 689

Protein sequence:

>689_residues
MKLRHVQIKNFRLLSDVDLALEDLTTVVVGRNNSGKTSLSEVIRRLLADGSAQFQLEDFSSACYEGFRLAWEARSNDEHD
DIVRALIPYIELRLTFQYDPNQPQLGPLSPFVIDLDPDCTEALVVVRYELKDGQLSQLFDGLPPTPLSAEARLTFFRTLR
DRIPGNYATRIWAEDPNDAGNQRQLLPNAVKGLVKTGFINAQRGLDDVTSRESDVLAKTVELLFATASSASADAADKQIA
DSLTDAVQGIQSQIDTNFGGQLKGLIPALKSFGYPGLGNQELHTETLLDVRKLLSNFTKVRYAGYSGVALPESYNGLGAR
NLIFILLQLAGFYKAYRAEATAPGIHLIFIEEPEAHLHPQMQEVFIRQLAKTAQLLVDSTEDKTPWPVQFVVSTHSSHVA
NEAGFESIRYFLGRDVSGAQPGVRQTMIKDLRRGLDGVSEPDKKFLHQYMTLTRCDLFFADKAILVEGLSERLLLPVLVG
KLEEAEPNSPKLSSQYVTTIEVGGAYAHLFFKLLHFLELRSLIITDLDAVEKAGGSACEVHKGTYSSNACLKAWFSDDDP
FTLAGLLAKGEAEKIKEGNRIAYQCAEAEGGPCGRTFEDAFILSNRALFGLTGNTREELEVAARSKAGEFKKSDFALRYA
IEEKGWSAPKYLVDGVRWLAAGIEPDQSDPALALAADVIVAKAEAAPHG

Sequences:

>Translated_689_residues
MKLRHVQIKNFRLLSDVDLALEDLTTVVVGRNNSGKTSLSEVIRRLLADGSAQFQLEDFSSACYEGFRLAWEARSNDEHD
DIVRALIPYIELRLTFQYDPNQPQLGPLSPFVIDLDPDCTEALVVVRYELKDGQLSQLFDGLPPTPLSAEARLTFFRTLR
DRIPGNYATRIWAEDPNDAGNQRQLLPNAVKGLVKTGFINAQRGLDDVTSRESDVLAKTVELLFATASSASADAADKQIA
DSLTDAVQGIQSQIDTNFGGQLKGLIPALKSFGYPGLGNQELHTETLLDVRKLLSNFTKVRYAGYSGVALPESYNGLGAR
NLIFILLQLAGFYKAYRAEATAPGIHLIFIEEPEAHLHPQMQEVFIRQLAKTAQLLVDSTEDKTPWPVQFVVSTHSSHVA
NEAGFESIRYFLGRDVSGAQPGVRQTMIKDLRRGLDGVSEPDKKFLHQYMTLTRCDLFFADKAILVEGLSERLLLPVLVG
KLEEAEPNSPKLSSQYVTTIEVGGAYAHLFFKLLHFLELRSLIITDLDAVEKAGGSACEVHKGTYSSNACLKAWFSDDDP
FTLAGLLAKGEAEKIKEGNRIAYQCAEAEGGPCGRTFEDAFILSNRALFGLTGNTREELEVAARSKAGEFKKSDFALRYA
IEEKGWSAPKYLVDGVRWLAAGIEPDQSDPALALAADVIVAKAEAAPHG
>Mature_689_residues
MKLRHVQIKNFRLLSDVDLALEDLTTVVVGRNNSGKTSLSEVIRRLLADGSAQFQLEDFSSACYEGFRLAWEARSNDEHD
DIVRALIPYIELRLTFQYDPNQPQLGPLSPFVIDLDPDCTEALVVVRYELKDGQLSQLFDGLPPTPLSAEARLTFFRTLR
DRIPGNYATRIWAEDPNDAGNQRQLLPNAVKGLVKTGFINAQRGLDDVTSRESDVLAKTVELLFATASSASADAADKQIA
DSLTDAVQGIQSQIDTNFGGQLKGLIPALKSFGYPGLGNQELHTETLLDVRKLLSNFTKVRYAGYSGVALPESYNGLGAR
NLIFILLQLAGFYKAYRAEATAPGIHLIFIEEPEAHLHPQMQEVFIRQLAKTAQLLVDSTEDKTPWPVQFVVSTHSSHVA
NEAGFESIRYFLGRDVSGAQPGVRQTMIKDLRRGLDGVSEPDKKFLHQYMTLTRCDLFFADKAILVEGLSERLLLPVLVG
KLEEAEPNSPKLSSQYVTTIEVGGAYAHLFFKLLHFLELRSLIITDLDAVEKAGGSACEVHKGTYSSNACLKAWFSDDDP
FTLAGLLAKGEAEKIKEGNRIAYQCAEAEGGPCGRTFEDAFILSNRALFGLTGNTREELEVAARSKAGEFKKSDFALRYA
IEEKGWSAPKYLVDGVRWLAAGIEPDQSDPALALAADVIVAKAEAAPHG

Specific function: Unknown

COG id: COG3593

COG function: function code L; Predicted ATP-dependent endonuclease of the OLD family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75760; Mature: 75760

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRHVQIKNFRLLSDVDLALEDLTTVVVGRNNSGKTSLSEVIRRLLADGSAQFQLEDFS
CCCEEEEECCEEEHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEHHHH
SACYEGFRLAWEARSNDEHDDIVRALIPYIELRLTFQYDPNQPQLGPLSPFVIDLDPDCT
HHHHHHHEEEEECCCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEEEECCCCCC
EALVVVRYELKDGQLSQLFDGLPPTPLSAEARLTFFRTLRDRIPGNYATRIWAEDPNDAG
CEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
NQRQLLPNAVKGLVKTGFINAQRGLDDVTSRESDVLAKTVELLFATASSASADAADKQIA
CHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DSLTDAVQGIQSQIDTNFGGQLKGLIPALKSFGYPGLGNQELHTETLLDVRKLLSNFTKV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
RYAGYSGVALPESYNGLGARNLIFILLQLAGFYKAYRAEATAPGIHLIFIEEPEAHLHPQ
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCHH
MQEVFIRQLAKTAQLLVDSTEDKTPWPVQFVVSTHSSHVANEAGFESIRYFLGRDVSGAQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
PGVRQTMIKDLRRGLDGVSEPDKKFLHQYMTLTRCDLFFADKAILVEGLSERLLLPVLVG
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHH
KLEEAEPNSPKLSSQYVTTIEVGGAYAHLFFKLLHFLELRSLIITDLDAVEKAGGSACEV
HHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
HKGTYSSNACLKAWFSDDDPFTLAGLLAKGEAEKIKEGNRIAYQCAEAEGGPCGRTFEDA
ECCCCCCCCCEEEECCCCCCEEHHHHHHCCCHHHHHCCCEEEEEEECCCCCCCCCCHHHH
FILSNRALFGLTGNTREELEVAARSKAGEFKKSDFALRYAIEEKGWSAPKYLVDGVRWLA
HEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHH
AGIEPDQSDPALALAADVIVAKAEAAPHG
CCCCCCCCCCHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MKLRHVQIKNFRLLSDVDLALEDLTTVVVGRNNSGKTSLSEVIRRLLADGSAQFQLEDFS
CCCEEEEECCEEEHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEHHHH
SACYEGFRLAWEARSNDEHDDIVRALIPYIELRLTFQYDPNQPQLGPLSPFVIDLDPDCT
HHHHHHHEEEEECCCCCCHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEEEECCCCCC
EALVVVRYELKDGQLSQLFDGLPPTPLSAEARLTFFRTLRDRIPGNYATRIWAEDPNDAG
CEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
NQRQLLPNAVKGLVKTGFINAQRGLDDVTSRESDVLAKTVELLFATASSASADAADKQIA
CHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DSLTDAVQGIQSQIDTNFGGQLKGLIPALKSFGYPGLGNQELHTETLLDVRKLLSNFTKV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
RYAGYSGVALPESYNGLGARNLIFILLQLAGFYKAYRAEATAPGIHLIFIEEPEAHLHPQ
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCHH
MQEVFIRQLAKTAQLLVDSTEDKTPWPVQFVVSTHSSHVANEAGFESIRYFLGRDVSGAQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
PGVRQTMIKDLRRGLDGVSEPDKKFLHQYMTLTRCDLFFADKAILVEGLSERLLLPVLVG
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHH
KLEEAEPNSPKLSSQYVTTIEVGGAYAHLFFKLLHFLELRSLIITDLDAVEKAGGSACEV
HHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
HKGTYSSNACLKAWFSDDDPFTLAGLLAKGEAEKIKEGNRIAYQCAEAEGGPCGRTFEDA
ECCCCCCCCCEEEECCCCCCEEHHHHHHCCCHHHHHCCCEEEEEEECCCCCCCCCCHHHH
FILSNRALFGLTGNTREELEVAARSKAGEFKKSDFALRYAIEEKGWSAPKYLVDGVRWLA
HEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHH
AGIEPDQSDPALALAADVIVAKAEAAPHG
CCCCCCCCCCHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA