Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688218

Identifier: 116688218

GI number: 116688218

Start: 217031

End: 217984

Strand: Reverse

Name: 116688218

Synonym: Bcen2424_0194

Alternate gene names: NA

Gene position: 217984-217031 (Counterclockwise)

Preceding gene: 116688220

Following gene: 116688217

Centisome position: 6.26

GC content: 57.34

Gene sequence:

>954_bases
ATGGCGAGCGAGCTTTTCAGCGAGTTCTTTTGGAGCAAGCTTGGGCCGGTGAACCATGACTGGCCGTGTGAAGATCAGGA
AAGGCACAAGGTCAAAGAACACCCGTGCGACGTTGTGTACTACTACGACGAGCCGTATGCGGCTCGACAGACATACGTGC
ACTGCGACCTCAAGAGCTACGCCAAAGGCACGATCACTGCTGCCGCTGTTAAAAGCGCGATCGAAAGCCTGGCCAAGCAG
GTGGCATGCGCCGAGAAAAGTGAGACCTGGCGGAACCTGCATACGCACGACAACGTGACGTTCTCCGTTAACGGACTGCT
GTTCGTGTACAACCATGACGGCGAATATGAGGCCGACTTCCAGAGGAATTTGGTTCATGTTGCGCCGGAGACTCTGCACC
TGCCGCGCGGGAGTCGGCTCTTCGTTCTTGGCCCAAAAGAAATATTCTGGCTGGACAACATCCGTGACGAGATCCAGCGG
CTACGTGGACGACGCATCCCGGAGGTTCCGGCACCCGAACACTGCTTCTACTTTCACCCGCAGTTGGTGAGGAGGGCGAA
TCTCCAGGTTCGGAAGGCCAAGGCGGCGACACTCGAGATGCTTACATCGCCCATCATTATCCTCGAGCACCACGATCCCA
AGGGAAGCGCGCGACGCGGCGTCATAGTCTTCTACTCGCGACCAGGAGACACGACAGATGAGTTCATGTACCTAATAGAC
ACGCTGCGCAAGTACGAGTTGCTCGACGACCAGACCAGCGTGACGGTGAAGACGCTAGGAGCATCTCCGATCTCGTCCCC
AACATTCCAGAAGGCGCAGTTGCAGTACATCGAGGGGCTTGTCGGCACCAACGTTGCGACCGACCTGGGGGACTACGTCA
ACGCGATCCGCTACGAGCCGATGTCACACATCAAGACCACGTACTCTAACGTCGACCTGGGGACCTGGGGATGA

Upstream 100 bases:

>100_bases
GCACTTGAATCGCGTATCCTGTCGCGAACAAGCGAGAACAGCAGTCCGGGGAGGGCGAGAATTGGCAGAAACTGGAAACA
CCGCGGAACAGGCGGAACTC

Downstream 100 bases:

>100_bases
GCGAATTTCTTGATCATCTGAGCGCAAACGACAACGACATCTACGACCTTCTCGTTTCGGGCAAGCAGCGGCTGACGGAG
TCGGTCTTGCGCGAGTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MASELFSEFFWSKLGPVNHDWPCEDQERHKVKEHPCDVVYYYDEPYAARQTYVHCDLKSYAKGTITAAAVKSAIESLAKQ
VACAEKSETWRNLHTHDNVTFSVNGLLFVYNHDGEYEADFQRNLVHVAPETLHLPRGSRLFVLGPKEIFWLDNIRDEIQR
LRGRRIPEVPAPEHCFYFHPQLVRRANLQVRKAKAATLEMLTSPIIILEHHDPKGSARRGVIVFYSRPGDTTDEFMYLID
TLRKYELLDDQTSVTVKTLGASPISSPTFQKAQLQYIEGLVGTNVATDLGDYVNAIRYEPMSHIKTTYSNVDLGTWG

Sequences:

>Translated_317_residues
MASELFSEFFWSKLGPVNHDWPCEDQERHKVKEHPCDVVYYYDEPYAARQTYVHCDLKSYAKGTITAAAVKSAIESLAKQ
VACAEKSETWRNLHTHDNVTFSVNGLLFVYNHDGEYEADFQRNLVHVAPETLHLPRGSRLFVLGPKEIFWLDNIRDEIQR
LRGRRIPEVPAPEHCFYFHPQLVRRANLQVRKAKAATLEMLTSPIIILEHHDPKGSARRGVIVFYSRPGDTTDEFMYLID
TLRKYELLDDQTSVTVKTLGASPISSPTFQKAQLQYIEGLVGTNVATDLGDYVNAIRYEPMSHIKTTYSNVDLGTWG
>Mature_316_residues
ASELFSEFFWSKLGPVNHDWPCEDQERHKVKEHPCDVVYYYDEPYAARQTYVHCDLKSYAKGTITAAAVKSAIESLAKQV
ACAEKSETWRNLHTHDNVTFSVNGLLFVYNHDGEYEADFQRNLVHVAPETLHLPRGSRLFVLGPKEIFWLDNIRDEIQRL
RGRRIPEVPAPEHCFYFHPQLVRRANLQVRKAKAATLEMLTSPIIILEHHDPKGSARRGVIVFYSRPGDTTDEFMYLIDT
LRKYELLDDQTSVTVKTLGASPISSPTFQKAQLQYIEGLVGTNVATDLGDYVNAIRYEPMSHIKTTYSNVDLGTWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36278; Mature: 36147

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASELFSEFFWSKLGPVNHDWPCEDQERHKVKEHPCDVVYYYDEPYAARQTYVHCDLKSY
CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCEEEEEECHHHH
AKGTITAAAVKSAIESLAKQVACAEKSETWRNLHTHDNVTFSVNGLLFVYNHDGEYEADF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCCHH
QRNLVHVAPETLHLPRGSRLFVLGPKEIFWLDNIRDEIQRLRGRRIPEVPAPEHCFYFHP
HCCEEEECCCCEECCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEECH
QLVRRANLQVRKAKAATLEMLTSPIIILEHHDPKGSARRGVIVFYSRPGDTTDEFMYLID
HHHHHCCCCEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
TLRKYELLDDQTSVTVKTLGASPISSPTFQKAQLQYIEGLVGTNVATDLGDYVNAIRYEP
HHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
MSHIKTTYSNVDLGTWG
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ASELFSEFFWSKLGPVNHDWPCEDQERHKVKEHPCDVVYYYDEPYAARQTYVHCDLKSY
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCEEEEEECHHHH
AKGTITAAAVKSAIESLAKQVACAEKSETWRNLHTHDNVTFSVNGLLFVYNHDGEYEADF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCCHH
QRNLVHVAPETLHLPRGSRLFVLGPKEIFWLDNIRDEIQRLRGRRIPEVPAPEHCFYFHP
HCCEEEECCCCEECCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEECH
QLVRRANLQVRKAKAATLEMLTSPIIILEHHDPKGSARRGVIVFYSRPGDTTDEFMYLID
HHHHHCCCCEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
TLRKYELLDDQTSVTVKTLGASPISSPTFQKAQLQYIEGLVGTNVATDLGDYVNAIRYEP
HHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
MSHIKTTYSNVDLGTWG
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA