| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688215
Identifier: 116688215
GI number: 116688215
Start: 213578
End: 214912
Strand: Direct
Name: 116688215
Synonym: Bcen2424_0191
Alternate gene names: NA
Gene position: 213578-214912 (Clockwise)
Preceding gene: 116688214
Following gene: 116688219
Centisome position: 6.13
GC content: 58.58
Gene sequence:
>1335_bases GTGCGCCGTTTCGATTTCCATCTGTCGTCGTTGGCGAATCGAAACGACTCGTTGCGTTCTTCGTTCAAAGTTCCACGAGC AAGGTTGCCGCCAATAGTTGCGGGAGCACGAATGTCAGTCAGCAAGAGCTGGGCGTATGTTACGGAGTTCGGTCGGGAGC GGATCACCGCTTGGGCGATCCAGCAAGAGCGCGCGAAGTATGAGGGAAAGCCGCTTGGCAGGACATACTGGAGCAACCAT AAACCGGGTCGGCGAAAGGCGGTCAAGCATGTCCAGAAAGCGGGAACAGCATTTTTCGCCTACATCAACCCGGCTGACGC AGAGGGCTGCGGTGAGGGCGAGTCCCTTTCGCACCGGTTGTTGAAAGAAGCCATTGCTGGGCTAGCCGGCACGAAACTCA AGCTCGGCAATTATGGCGATCACGACGTCACCATAACGCACGGCGAGATAGAAACACTCATTCCCACGATCGAAGGAACA TATTACGCTGACGCCTTCCTGCGTTTCACCTGCTCGACTCGACTGGCGCTCAGATGGTCGGGGGAGATCTATATTGAAGT GCACAACACGCACGCGGTGCCGGTCGACAAAGAGAAGGAACTTCGCCGTTCACGCGTGCCGGTTGTGGAAGTGCCGTTAT TGAAGGCGTTCGAGTATCCGTACCAGGATGAAGACACAACTGATCTGCGCGAAGCGGCACATGTAGAGAGGATACGGAAC ATGCTGGAAAACGGCTTCCTCGCGGGAAAGGTCATCAGCGACCGTCGCTCTGTCGAGTTCCTGGAACAGGAAGTGTCGCT CCTGAGGGCCTCGCTTCGGGAAGCGCGCGACGGTTGGGATTTGGCAAAACAGGCGACTGCCGATGCTAATGATCAACTGG CATCGGCCCGCGCCCGGATTGCGGAACAAGGGAAATCGATCGCTGACGACGCTCGGAACGTGAAGCGATGGGCTGACCAG TGCGGTGATCTGCAGCGAGAGTTCAACGAAGAAAAGGCCAAGGCTGGCGGGCTAAGCGGCGATTTGGCAAATGCTAAAGC GACGATCGTTGCGCTACGCAAGAAAGCGCGCCGCTATTCGATTGCGGGAGGTACCGGAATCCTTCTGGGCTTGTGCAGCG TGCCCGGCTATTGGCAGTTTTTAAAAGCGCCCTCGGTTGCGCAGGACTTGCCAGCGCAGCCCGCAGCGGTTTCGCCGACA GAGCACTCAGCGCCGGCGCGCGAAACGACGGTGTCCGCGAGACACGCGGCGCGGACCACCACGGCACATCGCCGTCCTGC GCACAGACCGGCTCCCATCGCCAACGAGAGCGAGCCGGAAGCTTCGACTCAATAA
Upstream 100 bases:
>100_bases ACTCCTTCCTGGGGAGCCTGTCGAAGTCGAGTTGCGCATTGCAAAGAACAAGACGGACTATGACGTGAGCAAGATGCCGA CGTTCTAGTCCTCCGGACGC
Downstream 100 bases:
>100_bases TAAATTGATCGTTGACGAACCTTCGGTGGGAGTTTGACGTTCAGAGCTTCGCTATCTGAACTCAGATTCTTCGGACCTGG AGTGAGTTCGACACGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MRRFDFHLSSLANRNDSLRSSFKVPRARLPPIVAGARMSVSKSWAYVTEFGRERITAWAIQQERAKYEGKPLGRTYWSNH KPGRRKAVKHVQKAGTAFFAYINPADAEGCGEGESLSHRLLKEAIAGLAGTKLKLGNYGDHDVTITHGEIETLIPTIEGT YYADAFLRFTCSTRLALRWSGEIYIEVHNTHAVPVDKEKELRRSRVPVVEVPLLKAFEYPYQDEDTTDLREAAHVERIRN MLENGFLAGKVISDRRSVEFLEQEVSLLRASLREARDGWDLAKQATADANDQLASARARIAEQGKSIADDARNVKRWADQ CGDLQREFNEEKAKAGGLSGDLANAKATIVALRKKARRYSIAGGTGILLGLCSVPGYWQFLKAPSVAQDLPAQPAAVSPT EHSAPARETTVSARHAARTTTAHRRPAHRPAPIANESEPEASTQ
Sequences:
>Translated_444_residues MRRFDFHLSSLANRNDSLRSSFKVPRARLPPIVAGARMSVSKSWAYVTEFGRERITAWAIQQERAKYEGKPLGRTYWSNH KPGRRKAVKHVQKAGTAFFAYINPADAEGCGEGESLSHRLLKEAIAGLAGTKLKLGNYGDHDVTITHGEIETLIPTIEGT YYADAFLRFTCSTRLALRWSGEIYIEVHNTHAVPVDKEKELRRSRVPVVEVPLLKAFEYPYQDEDTTDLREAAHVERIRN MLENGFLAGKVISDRRSVEFLEQEVSLLRASLREARDGWDLAKQATADANDQLASARARIAEQGKSIADDARNVKRWADQ CGDLQREFNEEKAKAGGLSGDLANAKATIVALRKKARRYSIAGGTGILLGLCSVPGYWQFLKAPSVAQDLPAQPAAVSPT EHSAPARETTVSARHAARTTTAHRRPAHRPAPIANESEPEASTQ >Mature_444_residues MRRFDFHLSSLANRNDSLRSSFKVPRARLPPIVAGARMSVSKSWAYVTEFGRERITAWAIQQERAKYEGKPLGRTYWSNH KPGRRKAVKHVQKAGTAFFAYINPADAEGCGEGESLSHRLLKEAIAGLAGTKLKLGNYGDHDVTITHGEIETLIPTIEGT YYADAFLRFTCSTRLALRWSGEIYIEVHNTHAVPVDKEKELRRSRVPVVEVPLLKAFEYPYQDEDTTDLREAAHVERIRN MLENGFLAGKVISDRRSVEFLEQEVSLLRASLREARDGWDLAKQATADANDQLASARARIAEQGKSIADDARNVKRWADQ CGDLQREFNEEKAKAGGLSGDLANAKATIVALRKKARRYSIAGGTGILLGLCSVPGYWQFLKAPSVAQDLPAQPAAVSPT EHSAPARETTVSARHAARTTTAHRRPAHRPAPIANESEPEASTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49188; Mature: 49188
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFDFHLSSLANRNDSLRSSFKVPRARLPPIVAGARMSVSKSWAYVTEFGRERITAWAI CCCCHHHHHHHHCCCHHHHHHHCCCHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH QQERAKYEGKPLGRTYWSNHKPGRRKAVKHVQKAGTAFFAYINPADAEGCGEGESLSHRL HHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHH LKEAIAGLAGTKLKLGNYGDHDVTITHGEIETLIPTIEGTYYADAFLRFTCSTRLALRWS HHHHHHCCCCCEEEECCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHCCEEEEEEC GEIYIEVHNTHAVPVDKEKELRRSRVPVVEVPLLKAFEYPYQDEDTTDLREAAHVERIRN CEEEEEEECCCCCCCCCHHHHHHHCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHH MLENGFLAGKVISDRRSVEFLEQEVSLLRASLREARDGWDLAKQATADANDQLASARARI HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHH AEQGKSIADDARNVKRWADQCGDLQREFNEEKAKAGGLSGDLANAKATIVALRKKARRYS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEE IAGGTGILLGLCSVPGYWQFLKAPSVAQDLPAQPAAVSPTEHSAPARETTVSARHAARTT CCCCCHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TAHRRPAHRPAPIANESEPEASTQ HHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRFDFHLSSLANRNDSLRSSFKVPRARLPPIVAGARMSVSKSWAYVTEFGRERITAWAI CCCCHHHHHHHHCCCHHHHHHHCCCHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH QQERAKYEGKPLGRTYWSNHKPGRRKAVKHVQKAGTAFFAYINPADAEGCGEGESLSHRL HHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHH LKEAIAGLAGTKLKLGNYGDHDVTITHGEIETLIPTIEGTYYADAFLRFTCSTRLALRWS HHHHHHCCCCCEEEECCCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHCCEEEEEEC GEIYIEVHNTHAVPVDKEKELRRSRVPVVEVPLLKAFEYPYQDEDTTDLREAAHVERIRN CEEEEEEECCCCCCCCCHHHHHHHCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHH MLENGFLAGKVISDRRSVEFLEQEVSLLRASLREARDGWDLAKQATADANDQLASARARI HHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHH AEQGKSIADDARNVKRWADQCGDLQREFNEEKAKAGGLSGDLANAKATIVALRKKARRYS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEE IAGGTGILLGLCSVPGYWQFLKAPSVAQDLPAQPAAVSPTEHSAPARETTVSARHAARTT CCCCCHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TAHRRPAHRPAPIANESEPEASTQ HHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA