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The map label for this gene is omp32 [H]

Identifier: 116688205

GI number: 116688205

Start: 199905

End: 201062

Strand: Direct

Name: omp32 [H]

Synonym: Bcen2424_0181

Alternate gene names: 116688205

Gene position: 199905-201062 (Clockwise)

Preceding gene: 116688204

Following gene: 116688206

Centisome position: 5.74

GC content: 65.28

Gene sequence:

>1158_bases
ATGAAACGCAGTCTATGGATGGCGCTTGCCATGAGCGTCACGGGTAGCGTCGCGTCATTCGCGGCGCTAGGCGATGCGCA
CGCCCAAAGTAGCGTGACGCTGTACGGTGTGCTCGATACCGGCGTGGAGTACGTCTCGCATGCGAATGCGGCCGGCGACA
GGCTCATCCGCATGCCCGGCACGACCGGCGAACTGCCGTCGCGTTGGGGCCTGCGCGGTAACGAAGATCTGGGCGGCGGC
ATGCAGGCCACCTTCGTGCTGGAAAGCGGCTTCAATGTGCGGGGCGGCGATCTTGGCCAGGGAGGACGGCTGTTCGGCCG
TCAGGCCTACGTGGGCATCGCATCCGCCTACGGCAAGCTGACCTTCGGGCGCCAGTACACGATGACCTTCTGGGCCCAGA
CCGACGCCGACATTCTGGGCCCCGACATCTACGGTCTCGGTGCGCTCGACGCCTACGTGCCCAACGCTCGCAGCGACAAC
ACGGTGTCGTACCTCGGCACATTCAGCGGGCTCACGCTCGGCGCGACGTGGTCGTTCGGGCGCGATTCGGCGGGGACCAG
CAATTCGCCCGGACAAGGCACGTGCGCGGGATCGGTCGCGGGCCATGCGACCGAGTGCCGTCAGTGGTCGGCACTCGTCA
AATACGACTCCCCATGGTTCGGCCTTGCAGCGGCATACGACGAGCAACGCGGTGGCACGAGCGCGGCAGCAAATTTCTTC
GACGGCGTGCCGCCACTGACGCTGACCAATCCCGCCGACAAGGACGCCCGGCTGCAATTCAACGGCTACGCGAAGCTCGG
CCCTGTGAAACTTGGCGGCGGCTGGATGGGACGGCGCGTCGTGACCGATTCGCCCGCGCTGCCGGATGTGCGCACGAATC
TCTTCTTTGTGGGCGCTGCATGGCAGGTGACGCCATCCTATATCGTAGATGGAGAGGTCTATCGGATAACGAATGCCCAG
CACGACACGCGCGCCACGCTCGGAACGTTGCGCAGCACCTATCTGCTTTCCAAGCGAACGGCTGTTTATCTGCAGGCCGC
CTATCTCGCGAACAGCGCGAAGGCGCGCTATTCGGTCAGCGCGGGCGGCGGCGGCACGACCCCCGCCGCCGGCATGAACC
AGACCGGCGTCATGGCGGGCATCCGGCAACTTTTTTAA

Upstream 100 bases:

>100_bases
TTACGGGTATCCACCTGAGCGCGATACCGGCACTTCCTCAGCGTGCCGCACAGCAGCCGCGCACTGATCCGAACGACATC
TCACGACACGGGGAAACGCC

Downstream 100 bases:

>100_bases
CGAGCGGCAGACGGGCCTCTTCGCCCTCCGTCGTCCTCTTTCGAGCGCCCTCGGGCCGCGTCGGACCGTCCCGGCGATCG
CTTGTGACCACTATGAGCAT

Product: outer membrane protein (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKRSLWMALAMSVTGSVASFAALGDAHAQSSVTLYGVLDTGVEYVSHANAAGDRLIRMPGTTGELPSRWGLRGNEDLGGG
MQATFVLESGFNVRGGDLGQGGRLFGRQAYVGIASAYGKLTFGRQYTMTFWAQTDADILGPDIYGLGALDAYVPNARSDN
TVSYLGTFSGLTLGATWSFGRDSAGTSNSPGQGTCAGSVAGHATECRQWSALVKYDSPWFGLAAAYDEQRGGTSAAANFF
DGVPPLTLTNPADKDARLQFNGYAKLGPVKLGGGWMGRRVVTDSPALPDVRTNLFFVGAAWQVTPSYIVDGEVYRITNAQ
HDTRATLGTLRSTYLLSKRTAVYLQAAYLANSAKARYSVSAGGGGTTPAAGMNQTGVMAGIRQLF

Sequences:

>Translated_385_residues
MKRSLWMALAMSVTGSVASFAALGDAHAQSSVTLYGVLDTGVEYVSHANAAGDRLIRMPGTTGELPSRWGLRGNEDLGGG
MQATFVLESGFNVRGGDLGQGGRLFGRQAYVGIASAYGKLTFGRQYTMTFWAQTDADILGPDIYGLGALDAYVPNARSDN
TVSYLGTFSGLTLGATWSFGRDSAGTSNSPGQGTCAGSVAGHATECRQWSALVKYDSPWFGLAAAYDEQRGGTSAAANFF
DGVPPLTLTNPADKDARLQFNGYAKLGPVKLGGGWMGRRVVTDSPALPDVRTNLFFVGAAWQVTPSYIVDGEVYRITNAQ
HDTRATLGTLRSTYLLSKRTAVYLQAAYLANSAKARYSVSAGGGGTTPAAGMNQTGVMAGIRQLF
>Mature_385_residues
MKRSLWMALAMSVTGSVASFAALGDAHAQSSVTLYGVLDTGVEYVSHANAAGDRLIRMPGTTGELPSRWGLRGNEDLGGG
MQATFVLESGFNVRGGDLGQGGRLFGRQAYVGIASAYGKLTFGRQYTMTFWAQTDADILGPDIYGLGALDAYVPNARSDN
TVSYLGTFSGLTLGATWSFGRDSAGTSNSPGQGTCAGSVAGHATECRQWSALVKYDSPWFGLAAAYDEQRGGTSAAANFF
DGVPPLTLTNPADKDARLQFNGYAKLGPVKLGGGWMGRRVVTDSPALPDVRTNLFFVGAAWQVTPSYIVDGEVYRITNAQ
HDTRATLGTLRSTYLLSKRTAVYLQAAYLANSAKARYSVSAGGGGTTPAAGMNQTGVMAGIRQLF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40482; Mature: 40482

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLWMALAMSVTGSVASFAALGDAHAQSSVTLYGVLDTGVEYVSHANAAGDRLIRMPG
CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEECCC
TTGELPSRWGLRGNEDLGGGMQATFVLESGFNVRGGDLGQGGRLFGRQAYVGIASAYGKL
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEECCHHEEEHHHHHCCE
TFGRQYTMTFWAQTDADILGPDIYGLGALDAYVPNARSDNTVSYLGTFSGLTLGATWSFG
EECCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEEEECCC
RDSAGTSNSPGQGTCAGSVAGHATECRQWSALVKYDSPWFGLAAAYDEQRGGTSAAANFF
CCCCCCCCCCCCCEECCCCCCCHHHHHHHHHEEEECCCCCEEEEHHHHHCCCCHHHHHHH
DGVPPLTLTNPADKDARLQFNGYAKLGPVKLGGGWMGRRVVTDSPALPDVRTNLFFVGAA
CCCCCEEECCCCCCCCEEEECCCEEECCEEECCCCCCCEEECCCCCCCCCCCCEEEEEEE
WQVTPSYIVDGEVYRITNAQHDTRATLGTLRSTYLLSKRTAVYLQAAYLANSAKARYSVS
EEECCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCEEEEE
AGGGGTTPAAGMNQTGVMAGIRQLF
CCCCCCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MKRSLWMALAMSVTGSVASFAALGDAHAQSSVTLYGVLDTGVEYVSHANAAGDRLIRMPG
CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEECCC
TTGELPSRWGLRGNEDLGGGMQATFVLESGFNVRGGDLGQGGRLFGRQAYVGIASAYGKL
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEECCHHEEEHHHHHCCE
TFGRQYTMTFWAQTDADILGPDIYGLGALDAYVPNARSDNTVSYLGTFSGLTLGATWSFG
EECCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEEEECCC
RDSAGTSNSPGQGTCAGSVAGHATECRQWSALVKYDSPWFGLAAAYDEQRGGTSAAANFF
CCCCCCCCCCCCCEECCCCCCCHHHHHHHHHEEEECCCCCEEEEHHHHHCCCCHHHHHHH
DGVPPLTLTNPADKDARLQFNGYAKLGPVKLGGGWMGRRVVTDSPALPDVRTNLFFVGAA
CCCCCEEECCCCCCCCEEEECCCEEECCEEECCCCCCCEEECCCCCCCCCCCCEEEEEEE
WQVTPSYIVDGEVYRITNAQHDTRATLGTLRSTYLLSKRTAVYLQAAYLANSAKARYSVS
EEECCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCEEEEE
AGGGGTTPAAGMNQTGVMAGIRQLF
CCCCCCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]