| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688203
Identifier: 116688203
GI number: 116688203
Start: 197615
End: 198499
Strand: Direct
Name: 116688203
Synonym: Bcen2424_0179
Alternate gene names: NA
Gene position: 197615-198499 (Clockwise)
Preceding gene: 116688201
Following gene: 116688204
Centisome position: 5.67
GC content: 62.6
Gene sequence:
>885_bases ATGCGCATTATCGATCTGCACTGTTACCCGAACACGCAACCCTGGATTGACAGTCAGGGGCCCTATGTCGAAGCGCTCGC GAGGTACTGGAAGCGCGACTGGTCAGCGAAGACCGAAGACGCCGTTGCCCGCGAGTTCCGTGAGAACAGGATCGAGGCGT GCCTGGTCGCGCTCGACCTCACCACGACCATTAACACGCCGCCCTGCTCGAACGATTACGTTGCGGGCATGCGCGATCGA CACGCTGACTGCATGATCGGCGCGTGGGGCGCAGTGGAGCCGTCGCTCGGCCGCGCGGCCATCGACGAGGCGCGCCACTG CGTGCGCGACCTCAGGATGACCGGTTTCCACTTCCATCCCATCATGCAGCACTTCAGCGTCGATGACAGCCGCTATTACC CGCTCTGGGAGGAGATCAGCGGCATGAAGGTGCCAGTCATGATCGACGTGGGCATGACCGGCATGGGCGCGGGTTTGCCG GGCGGCATGGGCGCTCGCACGCGCCACGCGCATCCTTCCGCGATCGATGCGCTCGCTGCCGACTTTCCGAACCTGACCAT CGTGATGGCGCATCCGGGGTATCCATGGATCGACGAAACCACGGTGGTCGCGCTGCACAAGGGCAACGTGTACTGGGAGA TGTCCGGCTGGGCGCCGAAGTATCTGCCGCAACAGATCGTGCGCGACATGCGCGGCCGCCTGAAAGACAAGATGATGTTC GGCAGCGACTATCCGAGCATTCCGTACCCGCGTCTACTCAAGGAATGGTCCGAGCTTGGTTTCAGCGACGCGTTCCTCGA AGACTTCTTTCACGGCAATGCGGAACGCGTGCTCGGCATTGGCACACAGCAGGCGAAGCAAGACTCGCTCGTGCGCGAAG CATGA
Upstream 100 bases:
>100_bases GATCACGCTCTATTTTGGTTGCAATTGTTCGACTTGAAAAGCGCTAACGGCCTTCGACCGTTTGTGTTCACCGCATCAGA CTAACAATGGAATCCGAGTC
Downstream 100 bases:
>100_bases TGTGCCGGGCCTCGCCGAAGCTGCCGGACCTCGCATGAACTGAGGCAGTGGCACGCGGTCACCCCGACGCAGAGCGGGAC ACCGCCCACCTTGACAGAGG
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Hydrolase; Antibiotic-Resistance Protein; Amidohydrolase Family; TIM-Barrel Fold Metal-Dependent Hydrolase
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRIIDLHCYPNTQPWIDSQGPYVEALARYWKRDWSAKTEDAVAREFRENRIEACLVALDLTTTINTPPCSNDYVAGMRDR HADCMIGAWGAVEPSLGRAAIDEARHCVRDLRMTGFHFHPIMQHFSVDDSRYYPLWEEISGMKVPVMIDVGMTGMGAGLP GGMGARTRHAHPSAIDALAADFPNLTIVMAHPGYPWIDETTVVALHKGNVYWEMSGWAPKYLPQQIVRDMRGRLKDKMMF GSDYPSIPYPRLLKEWSELGFSDAFLEDFFHGNAERVLGIGTQQAKQDSLVREA
Sequences:
>Translated_294_residues MRIIDLHCYPNTQPWIDSQGPYVEALARYWKRDWSAKTEDAVAREFRENRIEACLVALDLTTTINTPPCSNDYVAGMRDR HADCMIGAWGAVEPSLGRAAIDEARHCVRDLRMTGFHFHPIMQHFSVDDSRYYPLWEEISGMKVPVMIDVGMTGMGAGLP GGMGARTRHAHPSAIDALAADFPNLTIVMAHPGYPWIDETTVVALHKGNVYWEMSGWAPKYLPQQIVRDMRGRLKDKMMF GSDYPSIPYPRLLKEWSELGFSDAFLEDFFHGNAERVLGIGTQQAKQDSLVREA >Mature_294_residues MRIIDLHCYPNTQPWIDSQGPYVEALARYWKRDWSAKTEDAVAREFRENRIEACLVALDLTTTINTPPCSNDYVAGMRDR HADCMIGAWGAVEPSLGRAAIDEARHCVRDLRMTGFHFHPIMQHFSVDDSRYYPLWEEISGMKVPVMIDVGMTGMGAGLP GGMGARTRHAHPSAIDALAADFPNLTIVMAHPGYPWIDETTVVALHKGNVYWEMSGWAPKYLPQQIVRDMRGRLKDKMMF GSDYPSIPYPRLLKEWSELGFSDAFLEDFFHGNAERVLGIGTQQAKQDSLVREA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33248; Mature: 33248
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIDLHCYPNTQPWIDSQGPYVEALARYWKRDWSAKTEDAVAREFRENRIEACLVALDL CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEH TTTINTPPCSNDYVAGMRDRHADCMIGAWGAVEPSLGRAAIDEARHCVRDLRMTGFHFHP EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH IMQHFSVDDSRYYPLWEEISGMKVPVMIDVGMTGMGAGLPGGMGARTRHAHPSAIDALAA HHHHHCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH DFPNLTIVMAHPGYPWIDETTVVALHKGNVYWEMSGWAPKYLPQQIVRDMRGRLKDKMMF CCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC GSDYPSIPYPRLLKEWSELGFSDAFLEDFFHGNAERVLGIGTQQAKQDSLVREA CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHEEECCCHHHHHHHHHHCC >Mature Secondary Structure MRIIDLHCYPNTQPWIDSQGPYVEALARYWKRDWSAKTEDAVAREFRENRIEACLVALDL CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEH TTTINTPPCSNDYVAGMRDRHADCMIGAWGAVEPSLGRAAIDEARHCVRDLRMTGFHFHP EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH IMQHFSVDDSRYYPLWEEISGMKVPVMIDVGMTGMGAGLPGGMGARTRHAHPSAIDALAA HHHHHCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH DFPNLTIVMAHPGYPWIDETTVVALHKGNVYWEMSGWAPKYLPQQIVRDMRGRLKDKMMF CCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC GSDYPSIPYPRLLKEWSELGFSDAFLEDFFHGNAERVLGIGTQQAKQDSLVREA CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA