| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688190
Identifier: 116688190
GI number: 116688190
Start: 184577
End: 185833
Strand: Reverse
Name: 116688190
Synonym: Bcen2424_0166
Alternate gene names: NA
Gene position: 185833-184577 (Counterclockwise)
Preceding gene: 116688191
Following gene: 116688189
Centisome position: 5.33
GC content: 69.69
Gene sequence:
>1257_bases ATGGCAGGCATAGTTTTCACCAACGTTCGTGTGTTCGACGGCAGCGGCAGCGCGCCGTTTCCATCCCAGGTCCGCGTGGA AGGCAACCGGGTTGCCGCACTCGCGGCGCCGTCGGCACCGTCGCTCGCGCTCGCCGGCGATGCGCTCTACGACTGCGGCG GCGCGACCTTGATGCCCGGACTCGTCGAAGCGCACGCGCATCTGTCCTGGCCCAGCTCCGTCGAGCAGTTCGTGCCGGGC ATGGCGCTGCCGCCCGAGGAACTCGTGCTGACGACCGCCCGCAATGCCCGCATTCTGCTCGATCACGGTTTCACCAGCGC GTATTCGGCGGGGTCGCTGAGCAAGCGCGTCGAAGTCGCGCTGCGCGAGCAGATCGACAGCGGCGGGATGCCCGGGCCGC GCCTCGTCGCGTCGTCGATCGAACGCACGCCGCCGGTCGCCGCCGACGAACAGGAGCTGAACCCCGGCGAAGTCGACCCG CACGGCGTCGGCCCCGACGCGGTGCGCGCGTTCGTGCGCTCGTGCGCGGAGATGGGCGCGCGCTCGGTCAAATTTTTGCT CTCCGGCGAGGACGCGTTGCAGCCGGGCGCGTCGCAGCAACTGCTGTATAGCGAAGCCGAAGCCAAAGCCGCCGGTGACG AAGCCGCGGCCACGGGCGTCTGGCTCGCCGCGCACGCGCAGGCCGCCGAGGCGGTCAAGATGGCGCTGCGCAACGGCTTC CGGGTGCTGTATCACTGCACGTACGCGGACGACGAAGCGCTCGACATGCTGGAAGCCGCGCGCGAGCAGATCTTCGTCGC GCCCGCGATCGGCATCATTCAGGCGACGCTCGACGCGGTGCCGCCGCCGCATTTCGACATGACGCACATGAAGCAGAGCG CGGCCGAAGTGCGCGAGCTGCAGCAGCGCCTCGTGCCGGAACTGCGCCGGCGCGGCGTGCGCGTGCTGCCCGGCGGCGAC TACGGGTTCCCGTTCAATCCGAACGGCCGCAATGCCCGCGATCTGCAACTGTTCGTCGAACTGTTCGGCTATACGCCGGC GCAGGCGTTGCACGCCGCGACCGCGCTGGGCGGCGCGCTGATGGGCATGCCCGGCGAACTCGGGATGATCGCGCCCGGCT ACCTCGCCGATCTGCTGATCGTCGACGGCGATCCGACCGCGGACGTCGCGATCCTGCAGGACAGGCAACGCCTCGTCGGC ATCATGAAAGACGGCGCGTTCCACAAGGCGCCGCTCGCGATGCTTCGGACCGCTTGA
Upstream 100 bases:
>100_bases CTTCAGCCGTCTGCGCGCGCTCGCCGTCGCGCAGACGGCGTTCGACCTGCCTCCGGCACGTTGACTTTTTCTCTCTGGCA AATCACTTGAGGCCCCGACA
Downstream 100 bases:
>100_bases TAACCAGGGCCCACCACTCACGACGATGAATCACACCGATCCCCATACCGTTGCCCGGCTCGATGCGCTGATTCGCGCGA CCGGCGCCGTGATCGACCCG
Product: amidohydrolase
Products: NA
Alternate protein names: Amidohydrolase Family; X-Pro Dipeptidase; Imidazolonepropionase; Dipeptidase; Aryldialkylphosphatase-Related Protein; Secreted Hydrolase; Metal-Dependent Hydrolase; Xaa-Arg/Lys Peptidase; Amidohydrolase Domain-Containing Protein; Aryldialkylphosphatase Related Protein; Parathion Hydrolase; Pro-Hyp Dipeptidase; Xaa-Pro Dipeptidase Family; Xaa-Pro Dipeptidase; Exported Adenine Deaminase-Like Amidohydrolase
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MAGIVFTNVRVFDGSGSAPFPSQVRVEGNRVAALAAPSAPSLALAGDALYDCGGATLMPGLVEAHAHLSWPSSVEQFVPG MALPPEELVLTTARNARILLDHGFTSAYSAGSLSKRVEVALREQIDSGGMPGPRLVASSIERTPPVAADEQELNPGEVDP HGVGPDAVRAFVRSCAEMGARSVKFLLSGEDALQPGASQQLLYSEAEAKAAGDEAAATGVWLAAHAQAAEAVKMALRNGF RVLYHCTYADDEALDMLEAAREQIFVAPAIGIIQATLDAVPPPHFDMTHMKQSAAEVRELQQRLVPELRRRGVRVLPGGD YGFPFNPNGRNARDLQLFVELFGYTPAQALHAATALGGALMGMPGELGMIAPGYLADLLIVDGDPTADVAILQDRQRLVG IMKDGAFHKAPLAMLRTA
Sequences:
>Translated_418_residues MAGIVFTNVRVFDGSGSAPFPSQVRVEGNRVAALAAPSAPSLALAGDALYDCGGATLMPGLVEAHAHLSWPSSVEQFVPG MALPPEELVLTTARNARILLDHGFTSAYSAGSLSKRVEVALREQIDSGGMPGPRLVASSIERTPPVAADEQELNPGEVDP HGVGPDAVRAFVRSCAEMGARSVKFLLSGEDALQPGASQQLLYSEAEAKAAGDEAAATGVWLAAHAQAAEAVKMALRNGF RVLYHCTYADDEALDMLEAAREQIFVAPAIGIIQATLDAVPPPHFDMTHMKQSAAEVRELQQRLVPELRRRGVRVLPGGD YGFPFNPNGRNARDLQLFVELFGYTPAQALHAATALGGALMGMPGELGMIAPGYLADLLIVDGDPTADVAILQDRQRLVG IMKDGAFHKAPLAMLRTA >Mature_417_residues AGIVFTNVRVFDGSGSAPFPSQVRVEGNRVAALAAPSAPSLALAGDALYDCGGATLMPGLVEAHAHLSWPSSVEQFVPGM ALPPEELVLTTARNARILLDHGFTSAYSAGSLSKRVEVALREQIDSGGMPGPRLVASSIERTPPVAADEQELNPGEVDPH GVGPDAVRAFVRSCAEMGARSVKFLLSGEDALQPGASQQLLYSEAEAKAAGDEAAATGVWLAAHAQAAEAVKMALRNGFR VLYHCTYADDEALDMLEAAREQIFVAPAIGIIQATLDAVPPPHFDMTHMKQSAAEVRELQQRLVPELRRRGVRVLPGGDY GFPFNPNGRNARDLQLFVELFGYTPAQALHAATALGGALMGMPGELGMIAPGYLADLLIVDGDPTADVAILQDRQRLVGI MKDGAFHKAPLAMLRTA
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44113; Mature: 43982
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIVFTNVRVFDGSGSAPFPSQVRVEGNRVAALAAPSAPSLALAGDALYDCGGATLMPG CCCEEEEEEEEEECCCCCCCCCCEEECCCEEEEEECCCCCCEEECCCHHHHCCCCHHHHH LVEAHAHLSWPSSVEQFVPGMALPPEELVLTTARNARILLDHGFTSAYSAGSLSKRVEVA HHHHHHCCCCHHHHHHHCCCCCCCHHHEEEEECCCCEEEEECCCCCHHCCCCHHHHHHHH LREQIDSGGMPGPRLVASSIERTPPVAADEQELNPGEVDPHGVGPDAVRAFVRSCAEMGA HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC RSVKFLLSGEDALQPGASQQLLYSEAEAKAAGDEAAATGVWLAAHAQAAEAVKMALRNGF HHEEEEECCCHHCCCCCCHHHHHHHHHHHHCCCCHHHHHEHHHHHHHHHHHHHHHHHCCC RVLYHCTYADDEALDMLEAAREQIFVAPAIGIIQATLDAVPPPHFDMTHMKQSAAEVREL EEEEEEECCCHHHHHHHHHHHHHEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH QQRLVPELRRRGVRVLPGGDYGFPFNPNGRNARDLQLFVELFGYTPAQALHAATALGGAL HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MGMPGELGMIAPGYLADLLIVDGDPTADVAILQDRQRLVGIMKDGAFHKAPLAMLRTA HCCCCCCCCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure AGIVFTNVRVFDGSGSAPFPSQVRVEGNRVAALAAPSAPSLALAGDALYDCGGATLMPG CCEEEEEEEEEECCCCCCCCCCEEECCCEEEEEECCCCCCEEECCCHHHHCCCCHHHHH LVEAHAHLSWPSSVEQFVPGMALPPEELVLTTARNARILLDHGFTSAYSAGSLSKRVEVA HHHHHHCCCCHHHHHHHCCCCCCCHHHEEEEECCCCEEEEECCCCCHHCCCCHHHHHHHH LREQIDSGGMPGPRLVASSIERTPPVAADEQELNPGEVDPHGVGPDAVRAFVRSCAEMGA HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC RSVKFLLSGEDALQPGASQQLLYSEAEAKAAGDEAAATGVWLAAHAQAAEAVKMALRNGF HHEEEEECCCHHCCCCCCHHHHHHHHHHHHCCCCHHHHHEHHHHHHHHHHHHHHHHHCCC RVLYHCTYADDEALDMLEAAREQIFVAPAIGIIQATLDAVPPPHFDMTHMKQSAAEVREL EEEEEEECCCHHHHHHHHHHHHHEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH QQRLVPELRRRGVRVLPGGDYGFPFNPNGRNARDLQLFVELFGYTPAQALHAATALGGAL HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MGMPGELGMIAPGYLADLLIVDGDPTADVAILQDRQRLVGIMKDGAFHKAPLAMLRTA HCCCCCCCCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA