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The map label for this gene is ycgM [C]

Identifier: 116688184

GI number: 116688184

Start: 177438

End: 178304

Strand: Direct

Name: ycgM [C]

Synonym: Bcen2424_0160

Alternate gene names: 116688184

Gene position: 177438-178304 (Clockwise)

Preceding gene: 116688183

Following gene: 116688185

Centisome position: 5.09

GC content: 65.05

Gene sequence:

>867_bases
ATGAAACTGGTTACTTTCCGTTCGGGCGATACGACGCGTCTTGGCGTTCTCGATGGCGACGATGTCGTGGATCTCAACAA
AGCAGACGCGTCCGTGCCCGCCGATCTGCGCGCGGCGCTCAAAGCAGGTGTCGACCTGAACGCGGCCGCGCGGCGCGCGA
TTGCGAGCGGTGAGCACCGCGCGCCGTATGCGTCGCTGAAGCTCGCGCCGGTCGTGCCGGAGCCGGGCAAGGTGGTGTGC
CTCGGCCACAACTTCTACGACCACGCGAAGGAAGGCGGCAATCTGAAGCCGGTTTATCCGCTGATTTTCTTCCGTGGCAC
GTCGTCGCTGATCGCACACGAAGATCCGGTGATCCGTCCGCGCGTATCGGAAAAGCTCGACTACGAAGCTGAACTGCTGG
TCGTGATCGGCAAGCGCGCGCGCCACGTGAAGCGCGAAAACGCGCTCGACTACGTCTTCGGCTACGCATGCTTCAACGAT
GTGTCGGTGCGCGACTACCAGAAGCGCACGTCGCAATGGACGATCGGCAAGAACTTCGACGGCACCGGCGCATCGGGTCC
GTGGCTCGTGACCGCCGACGACCTGCCGCCGGGCGCGGAGGGCCTCTCGCTGCGCCTGATCCTTAACGGCCAGGTGATGC
AGCAGGCGAGCACGAGCGACATGATTTGGGGCGTCGCCGAAACGATCGAACTGCTGACCGAGTGCCTCACGCTCGAACCG
GGCGACGTCGTCGCGATGGGCACGCCGGCCGGTGTGGGCTGGGCGCGCGAGCCGTCGGTGTGGCTCAAGGCGGGCGACCG
CGTCGAAGTGGACATCGAACGTATCGGCCGTCTGCAAAACACGGTGCAGGACGAAGCGGGCGCATGA

Upstream 100 bases:

>100_bases
CGCAGAGAACCATCCTGTTCCGCGCGCCACAACCTGAATCGCGCTGATCCGGCAAACCGCCTCGCTTAATCAAACTATTT
TTTAATTTTCGAAAAACATC

Downstream 100 bases:

>100_bases
CGATGGAACGCAACGAACATTTCGACGTCGTCGTGGTGGGCTTCGGCCCGTCCGGCGCAGTCGCGGCGGGTCTGCTGGGT
CAGCGCGGCCGCAAGGTGCT

Product: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKLVTFRSGDTTRLGVLDGDDVVDLNKADASVPADLRAALKAGVDLNAAARRAIASGEHRAPYASLKLAPVVPEPGKVVC
LGHNFYDHAKEGGNLKPVYPLIFFRGTSSLIAHEDPVIRPRVSEKLDYEAELLVVIGKRARHVKRENALDYVFGYACFND
VSVRDYQKRTSQWTIGKNFDGTGASGPWLVTADDLPPGAEGLSLRLILNGQVMQQASTSDMIWGVAETIELLTECLTLEP
GDVVAMGTPAGVGWAREPSVWLKAGDRVEVDIERIGRLQNTVQDEAGA

Sequences:

>Translated_288_residues
MKLVTFRSGDTTRLGVLDGDDVVDLNKADASVPADLRAALKAGVDLNAAARRAIASGEHRAPYASLKLAPVVPEPGKVVC
LGHNFYDHAKEGGNLKPVYPLIFFRGTSSLIAHEDPVIRPRVSEKLDYEAELLVVIGKRARHVKRENALDYVFGYACFND
VSVRDYQKRTSQWTIGKNFDGTGASGPWLVTADDLPPGAEGLSLRLILNGQVMQQASTSDMIWGVAETIELLTECLTLEP
GDVVAMGTPAGVGWAREPSVWLKAGDRVEVDIERIGRLQNTVQDEAGA
>Mature_288_residues
MKLVTFRSGDTTRLGVLDGDDVVDLNKADASVPADLRAALKAGVDLNAAARRAIASGEHRAPYASLKLAPVVPEPGKVVC
LGHNFYDHAKEGGNLKPVYPLIFFRGTSSLIAHEDPVIRPRVSEKLDYEAELLVVIGKRARHVKRENALDYVFGYACFND
VSVRDYQKRTSQWTIGKNFDGTGASGPWLVTADDLPPGAEGLSLRLILNGQVMQQASTSDMIWGVAETIELLTECLTLEP
GDVVAMGTPAGVGWAREPSVWLKAGDRVEVDIERIGRLQNTVQDEAGA

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=288, Percent_Identity=37.5, Blast_Score=190, Evalue=1e-48,
Organism=Homo sapiens, GI40786394, Length=288, Percent_Identity=37.1527777777778, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI215422413, Length=184, Percent_Identity=33.695652173913, Blast_Score=114, Evalue=7e-26,
Organism=Homo sapiens, GI66348062, Length=184, Percent_Identity=33.695652173913, Blast_Score=114, Evalue=9e-26,
Organism=Homo sapiens, GI13654274, Length=184, Percent_Identity=33.695652173913, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1787428, Length=202, Percent_Identity=31.6831683168317, Blast_Score=99, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17557057, Length=197, Percent_Identity=36.0406091370558, Blast_Score=127, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6324161, Length=232, Percent_Identity=28.8793103448276, Blast_Score=90, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28572127, Length=291, Percent_Identity=35.3951890034364, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24663695, Length=220, Percent_Identity=32.7272727272727, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28571789, Length=213, Percent_Identity=30.0469483568075, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 31163; Mature: 31163

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVTFRSGDTTRLGVLDGDDVVDLNKADASVPADLRAALKAGVDLNAAARRAIASGEHR
CEEEEEECCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCC
APYASLKLAPVVPEPGKVVCLGHNFYDHAKEGGNLKPVYPLIFFRGTSSLIAHEDPVIRP
CCCCEEEEEECCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEEECCCCCEEECCCCCCCC
RVSEKLDYEAELLVVIGKRARHVKRENALDYVFGYACFNDVSVRDYQKRTSQWTIGKNFD
CCHHHCCCCEEEEEEECHHHHHHHHHCCHHHEEHHHHHCCCCHHHHHHHCCEEECCCCCC
GTGASGPWLVTADDLPPGAEGLSLRLILNGQVMQQASTSDMIWGVAETIELLTECLTLEP
CCCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
GDVVAMGTPAGVGWAREPSVWLKAGDRVEVDIERIGRLQNTVQDEAGA
CCEEEECCCCCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLVTFRSGDTTRLGVLDGDDVVDLNKADASVPADLRAALKAGVDLNAAARRAIASGEHR
CEEEEEECCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCC
APYASLKLAPVVPEPGKVVCLGHNFYDHAKEGGNLKPVYPLIFFRGTSSLIAHEDPVIRP
CCCCEEEEEECCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEEECCCCCEEECCCCCCCC
RVSEKLDYEAELLVVIGKRARHVKRENALDYVFGYACFNDVSVRDYQKRTSQWTIGKNFD
CCHHHCCCCEEEEEEECHHHHHHHHHCCHHHEEHHHHHCCCCHHHHHHHCCEEECCCCCC
GTGASGPWLVTADDLPPGAEGLSLRLILNGQVMQQASTSDMIWGVAETIELLTECLTLEP
CCCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
GDVVAMGTPAGVGWAREPSVWLKAGDRVEVDIERIGRLQNTVQDEAGA
CCEEEECCCCCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]