| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688177
Identifier: 116688177
GI number: 116688177
Start: 170343
End: 171272
Strand: Reverse
Name: 116688177
Synonym: Bcen2424_0153
Alternate gene names: NA
Gene position: 171272-170343 (Counterclockwise)
Preceding gene: 116688178
Following gene: 116688175
Centisome position: 4.92
GC content: 61.08
Gene sequence:
>930_bases GTGCATCGCTCGATGTTTGCGCGCTTCCACCGCTACCTTCGAAGCCGCGGCGTCACGGTCGCGGAGTTCGGCACCGCCCA TATCGACGGCTTCTTCGTCGAGCTGGATCGCGACTGCGCGCCCGGTACATCTACACGCCTGCGTTATCTCAAACTGCTGG ATCGGCTCTCGCGCCACCTTTCGCTGCTCGACCTGCGTAGCGACAACCCTGCGGCGAGCATGCTTCCTCAGGAGCACTGG CCGGAGGACGAGCCGATGCCGGTTTTTCTGTCGCCGGATGAGGATGTGGGATTGCAGGCGACTGGCCTGATCGGCACGAT GGCCGCGTTAGTGCTTGGCCTGCTGATTTCGTCGGCGAAGAGTTCATTCGACACGGTGGACAGCGAGCTTGTGCACAATG CTGCCAACATCGTTCTCCTTGATCGCGTACTGGCGAGGTATGGAACGGAAACGCAGGAAGTCCGGCGCTTGATCAAGCAG AGCTACGGCAGGTCGATCCAGATACTCGCTTCCCGGGATCATGCGCAGATTGCAAGACTTCGTGGCGCCGAGATACGCAA ACAGATGGAAGACCTTCAGCGCAAGCTGGAGGAACTTTCGCCGCACACCGAAGCGCAGCGTCAGCTGCGGGCAAGTGCCA TCGAAATTGCTGCGGAAGTGCTGGCTATGCGCCGGCTGGTCTTGCTGCAAGCGGTGGGCTCGGTCCCCATGCCGCTGCTG ATAACGCTGGTGTTGTGGCTGTCCGTTATTTTCGGCGCGTTCGGGACGTTCGCTGCGCCCAACGGGACCGTCATTGCAGC GTTGCTTCTCGGTGCGCTATCCGCTTCCGCGGCGATTTTTCTAATCCTGGAAATGAACACGCCGCTCGATGGGGTGATCG GCATCTCGCTCGCGCCTATGCGCGAGGCGCTCGACATGCTCGGCCAGTAG
Upstream 100 bases:
>100_bases CGCGAGTGCGGTGACCGCTTCTGCGATCAACGTTTCGTCTGGCAGTACTGTCTGGTACTCGGCGCCAAGATCTTGTTCGG CAGGTTGTACAGCGCATAGT
Downstream 100 bases:
>100_bases CGGTTATAGAAGTTCGTCAAAGTCAACTGCAGTGACGATTTTGGTCGACGTTTCCCCCCTATGACGATGCGATCGCGTCA GGCTTTACGGCAAGCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MHRSMFARFHRYLRSRGVTVAEFGTAHIDGFFVELDRDCAPGTSTRLRYLKLLDRLSRHLSLLDLRSDNPAASMLPQEHW PEDEPMPVFLSPDEDVGLQATGLIGTMAALVLGLLISSAKSSFDTVDSELVHNAANIVLLDRVLARYGTETQEVRRLIKQ SYGRSIQILASRDHAQIARLRGAEIRKQMEDLQRKLEELSPHTEAQRQLRASAIEIAAEVLAMRRLVLLQAVGSVPMPLL ITLVLWLSVIFGAFGTFAAPNGTVIAALLLGALSASAAIFLILEMNTPLDGVIGISLAPMREALDMLGQ
Sequences:
>Translated_309_residues MHRSMFARFHRYLRSRGVTVAEFGTAHIDGFFVELDRDCAPGTSTRLRYLKLLDRLSRHLSLLDLRSDNPAASMLPQEHW PEDEPMPVFLSPDEDVGLQATGLIGTMAALVLGLLISSAKSSFDTVDSELVHNAANIVLLDRVLARYGTETQEVRRLIKQ SYGRSIQILASRDHAQIARLRGAEIRKQMEDLQRKLEELSPHTEAQRQLRASAIEIAAEVLAMRRLVLLQAVGSVPMPLL ITLVLWLSVIFGAFGTFAAPNGTVIAALLLGALSASAAIFLILEMNTPLDGVIGISLAPMREALDMLGQ >Mature_309_residues MHRSMFARFHRYLRSRGVTVAEFGTAHIDGFFVELDRDCAPGTSTRLRYLKLLDRLSRHLSLLDLRSDNPAASMLPQEHW PEDEPMPVFLSPDEDVGLQATGLIGTMAALVLGLLISSAKSSFDTVDSELVHNAANIVLLDRVLARYGTETQEVRRLIKQ SYGRSIQILASRDHAQIARLRGAEIRKQMEDLQRKLEELSPHTEAQRQLRASAIEIAAEVLAMRRLVLLQAVGSVPMPLL ITLVLWLSVIFGAFGTFAAPNGTVIAALLLGALSASAAIFLILEMNTPLDGVIGISLAPMREALDMLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33999; Mature: 33999
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRSMFARFHRYLRSRGVTVAEFGTAHIDGFFVELDRDCAPGTSTRLRYLKLLDRLSRHL CCHHHHHHHHHHHHHCCCEEECCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH SLLDLRSDNPAASMLPQEHWPEDEPMPVFLSPDEDVGLQATGLIGTMAALVLGLLISSAK HHHHCCCCCCHHHCCCHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SSFDTVDSELVHNAANIVLLDRVLARYGTETQEVRRLIKQSYGRSIQILASRDHAQIARL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHH RGAEIRKQMEDLQRKLEELSPHTEAQRQLRASAIEIAAEVLAMRRLVLLQAVGSVPMPLL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ITLVLWLSVIFGAFGTFAAPNGTVIAALLLGALSASAAIFLILEMNTPLDGVIGISLAPM HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHCCCHHHH REALDMLGQ HHHHHHHCC >Mature Secondary Structure MHRSMFARFHRYLRSRGVTVAEFGTAHIDGFFVELDRDCAPGTSTRLRYLKLLDRLSRHL CCHHHHHHHHHHHHHCCCEEECCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH SLLDLRSDNPAASMLPQEHWPEDEPMPVFLSPDEDVGLQATGLIGTMAALVLGLLISSAK HHHHCCCCCCHHHCCCHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SSFDTVDSELVHNAANIVLLDRVLARYGTETQEVRRLIKQSYGRSIQILASRDHAQIARL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHH RGAEIRKQMEDLQRKLEELSPHTEAQRQLRASAIEIAAEVLAMRRLVLLQAVGSVPMPLL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ITLVLWLSVIFGAFGTFAAPNGTVIAALLLGALSASAAIFLILEMNTPLDGVIGISLAPM HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHCCCHHHH REALDMLGQ HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA