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The map label for this gene is 116688175

Identifier: 116688175

GI number: 116688175

Start: 167175

End: 168062

Strand: Reverse

Name: 116688175

Synonym: Bcen2424_0151

Alternate gene names: NA

Gene position: 168062-167175 (Counterclockwise)

Preceding gene: 116688177

Following gene: 116688173

Centisome position: 4.82

GC content: 70.16

Gene sequence:

>888_bases
ATGAGCGAAGCACCCCACGAATCTCCCGTCAAAACCCCCGGGCAGCTGATTGCCGTCATCATCGCGTCGTTCGCGATCCC
GATCATCCTGATCGTCCTGTTCGCCAATTACGCGAACCATGCGTTCCGTTCCGGCGCCGGCACGGACGCGCTATCCGACG
AGCAGGTCGCCGCACGTATCGCCCCCATCGCGAAGGTCGAGGTGAAGGACGCCAACGCACCCCGCACGTACAAAACCGGC
GAGGAGGTCTACAAGGCCGTCTGCGTGACCTGCCACGGCACCGGCGCCGCCGGCGCGCCGAAGTTCGGCAACAAGGACGA
CTGGGCGCCGCGCATCTCGCAAGGCTTCGACACGCTGCTGAAGACGGCCCTCGCGGGCAAGGGCGCGATGCCGGCGCGCG
GCGGCACGAGCCCCGACGACGTCAGCGACTATGAAATCGCCCGCGCGATCGTCTACATGGCGAACAACGACGGCGCGAAC
TTCCCCGAGCCGGCCGCACCGGCCGCCAATGCGGCGCAGCCCGCCAGCGGCGCGCCCGCGTCGGGCGCCGACGCGTCGAA
CGCGCAGGCCGCCGCGGCCATGGCCGCGATCGCCGCGATCCCGAAGGCCGGCGAAAAGCCCGCGGCCGCCCCGGCCGGCG
CCGACGCGGCAACGGCCGGCAAGGCGCTGTACGCGTCGACCTGCCAGGCCTGCCACGCGGCCGGCGTGCTGGGCGCGCCG
AAGTTCGGCAGCAAGGAAGACTGGGCGCCGCGCCTGAAGGACTCGATGGATACGGTCTACAACTACGCGCTGCACGGCAA
GGGCGCGATGCCGCCGAAGGGCGGATCGAACGCGTCCGATGCCGACGTGAAGGCGGCCGTCGACTACATGGTCAACTCGG
CGAAGTAA

Upstream 100 bases:

>100_bases
GTGATGTAAACGTTCCGTCTATAATCGTCCGTGCTTCATTGGACTGCCATTTTGCCGTTGCACCGCGCTCACAATTCCTA
TTCATGGAGACGAGGCAAGC

Downstream 100 bases:

>100_bases
CGACTCACCCGGCCATCCGTAAAAAACCCCCGCGACGCCCTTGCATCGCGGGGGTTTCGTTTTTGTGTCGCCGGTTGGCC
GCGCCAGCGTGCGCGGCACT

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRSGAGTDALSDEQVAARIAPIAKVEVKDANAPRTYKTG
EEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLLKTALAGKGAMPARGGTSPDDVSDYEIARAIVYMANNDGAN
FPEPAAPAANAAQPASGAPASGADASNAQAAAAMAAIAAIPKAGEKPAAAPAGADAATAGKALYASTCQACHAAGVLGAP
KFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNSAK

Sequences:

>Translated_295_residues
MSEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRSGAGTDALSDEQVAARIAPIAKVEVKDANAPRTYKTG
EEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLLKTALAGKGAMPARGGTSPDDVSDYEIARAIVYMANNDGAN
FPEPAAPAANAAQPASGAPASGADASNAQAAAAMAAIAAIPKAGEKPAAAPAGADAATAGKALYASTCQACHAAGVLGAP
KFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNSAK
>Mature_294_residues
SEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRSGAGTDALSDEQVAARIAPIAKVEVKDANAPRTYKTGE
EVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLLKTALAGKGAMPARGGTSPDDVSDYEIARAIVYMANNDGANF
PEPAAPAANAAQPASGAPASGADASNAQAAAAMAAIAAIPKAGEKPAAAPAGADAATAGKALYASTCQACHAAGVLGAPK
FGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNSAK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 29710; Mature: 29579

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRSGAGTDALSDEQVAARI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
APIAKVEVKDANAPRTYKTGEEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLL
CCHHEEEEECCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KTALAGKGAMPARGGTSPDDVSDYEIARAIVYMANNDGANFPEPAAPAANAAQPASGAPA
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
SGADASNAQAAAAMAAIAAIPKAGEKPAAAPAGADAATAGKALYASTCQACHAAGVLGAP
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
KFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNSAK
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRSGAGTDALSDEQVAARI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
APIAKVEVKDANAPRTYKTGEEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLL
CCHHEEEEECCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KTALAGKGAMPARGGTSPDDVSDYEIARAIVYMANNDGANFPEPAAPAANAAQPASGAPA
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
SGADASNAQAAAAMAAIAAIPKAGEKPAAAPAGADAATAGKALYASTCQACHAAGVLGAP
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
KFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNSAK
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]