| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is eutR [H]
Identifier: 116688160
GI number: 116688160
Start: 148553
End: 149608
Strand: Direct
Name: eutR [H]
Synonym: Bcen2424_0136
Alternate gene names: 116688160
Gene position: 148553-149608 (Clockwise)
Preceding gene: 116688159
Following gene: 116688163
Centisome position: 4.26
GC content: 72.16
Gene sequence:
>1056_bases ATGGATACGCACGGTTCCGCGCAGGTGAGGGAGGACACGATGAATCAACATGTGGCGTGTACGGCGGAGCCGACCGCCGA AGACACGCGGCGCAGCGCGCAGGGCGACGACGCGTTCGCCGGGCAGGCCGTCGTCAGCGTCGCGCACGATGCGGACGAGC AGGCGCGCAACCTGATCGGCTGGCGGCAGACCTACGACCAGCTCGCGGCCGGCCGCTTCGTCGGCACGCTGACCGAGCTG CCGCTCGACACGATGAAGCTGTTTCGCGAATCGACCAGCCACCTGCTGCGCCAGGCGTGCGAGGTGCGCGGCGATGCGTA CTGGTTCGGCATCCCGCTCGTGTGCGACGGTTCTGCGCGTGTCGATGCGTGCCGCATCGGCCCCGGCGCGCTCGCGTTCC GGCCCGGCAACGTCGAGTTCGAACTCGTGACGCCCGCGCAGTTCTCGATCTACGGCGTCGTCGTGCGCGGTGACGTGCTG CGCCGCTATGCGGAGGAAGTCGAACGGCGCGCGCTCGACGAGCGGCTGTTCACCCAGCGCGTGATGCAGGTCGGCGACGC GCGGCTCGCGCGCCTGTGCGCGCTGCTCGGGCGCCGGCTCGACGGCGCGGTGGCGATGGCCGGCCCGTTGCCCGATGCGC AGCGCGACGACCTGCAGGCCGAAGTGCTGGCCGCGCTGTTCGATGCGTGCGCGCAACCGGCCGACGACGGCAGCGGCGCC GCGCCGTCGACGCGCCGCTGGATCGTCGACCAGGCGCGCGACTACGTGCTCGCGCACCGCACGCGCCCGGTCGGCGTGCC CGAGCTGTGCGAGCAGTTGCACGTGAGCCGGCGCACGCTGCAGTACTGTTTCCAGGACGTGCTCGGGATGGCGCCCGCGA CCTACCTGCGCACGCTGCGGCTGAACGGCGCGCGGCGCGACCTGTGCGGGCGTGCGGCCGGTTCGGTGCAGGACGTCGCG GAGGCGTGGGGCTTCTGGCATCTGAGCCAGTTCGCGACGGATTACCGGCGCCTGTTCGGCAAGCGGCCGTCGGAGACGCT GCGCGATCGCGCGTGA
Upstream 100 bases:
>100_bases CATGCCGCCTTCGGGTGCGCCCGCATGGCGCGCATCGGCCGGACAGCGTGCAATGGCGGGCTGCTCGCCGGGCCATGAGG TTCGGCACGGGACTTGCGTG
Downstream 100 bases:
>100_bases GGGGCTTGGCGGGGTCAGTCGGGGCGTCGAAGCGGCCTCCGCGCGGTGCTCATGCCGTGCGCGTACGGCTGCCGGTTCGG TCGTTCCACTCGCCGCCGCG
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Ethanolamine operon regulatory protein [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MDTHGSAQVREDTMNQHVACTAEPTAEDTRRSAQGDDAFAGQAVVSVAHDADEQARNLIGWRQTYDQLAAGRFVGTLTEL PLDTMKLFRESTSHLLRQACEVRGDAYWFGIPLVCDGSARVDACRIGPGALAFRPGNVEFELVTPAQFSIYGVVVRGDVL RRYAEEVERRALDERLFTQRVMQVGDARLARLCALLGRRLDGAVAMAGPLPDAQRDDLQAEVLAALFDACAQPADDGSGA APSTRRWIVDQARDYVLAHRTRPVGVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRTLRLNGARRDLCGRAAGSVQDVA EAWGFWHLSQFATDYRRLFGKRPSETLRDRA
Sequences:
>Translated_351_residues MDTHGSAQVREDTMNQHVACTAEPTAEDTRRSAQGDDAFAGQAVVSVAHDADEQARNLIGWRQTYDQLAAGRFVGTLTEL PLDTMKLFRESTSHLLRQACEVRGDAYWFGIPLVCDGSARVDACRIGPGALAFRPGNVEFELVTPAQFSIYGVVVRGDVL RRYAEEVERRALDERLFTQRVMQVGDARLARLCALLGRRLDGAVAMAGPLPDAQRDDLQAEVLAALFDACAQPADDGSGA APSTRRWIVDQARDYVLAHRTRPVGVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRTLRLNGARRDLCGRAAGSVQDVA EAWGFWHLSQFATDYRRLFGKRPSETLRDRA >Mature_351_residues MDTHGSAQVREDTMNQHVACTAEPTAEDTRRSAQGDDAFAGQAVVSVAHDADEQARNLIGWRQTYDQLAAGRFVGTLTEL PLDTMKLFRESTSHLLRQACEVRGDAYWFGIPLVCDGSARVDACRIGPGALAFRPGNVEFELVTPAQFSIYGVVVRGDVL RRYAEEVERRALDERLFTQRVMQVGDARLARLCALLGRRLDGAVAMAGPLPDAQRDDLQAEVLAALFDACAQPADDGSGA APSTRRWIVDQARDYVLAHRTRPVGVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRTLRLNGARRDLCGRAAGSVQDVA EAWGFWHLSQFATDYRRLFGKRPSETLRDRA
Specific function: Activates the transcription of the eut operon. Also positively regulates its own transcription. Probably binds ethanolamine and vitamin B12 as effectors [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788778, Length=309, Percent_Identity=38.1877022653722, Blast_Score=205, Evalue=3e-54,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 [H]
Pfam domain/function: PF00165 HTH_AraC [H]
EC number: NA
Molecular weight: Translated: 38851; Mature: 38851
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTHGSAQVREDTMNQHVACTAEPTAEDTRRSAQGDDAFAGQAVVSVAHDADEQARNLIG CCCCCCCHHHHHHHCCCEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHH WRQTYDQLAAGRFVGTLTELPLDTMKLFRESTSHLLRQACEVRGDAYWFGIPLVCDGSAR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEECCCCC VDACRIGPGALAFRPGNVEFELVTPAQFSIYGVVVRGDVLRRYAEEVERRALDERLFTQR CCEEECCCCCEEECCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH VMQVGDARLARLCALLGRRLDGAVAMAGPLPDAQRDDLQAEVLAALFDACAQPADDGSGA HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC APSTRRWIVDQARDYVLAHRTRPVGVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRTLR CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LNGARRDLCGRAAGSVQDVAEAWGFWHLSQFATDYRRLFGKRPSETLRDRA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure MDTHGSAQVREDTMNQHVACTAEPTAEDTRRSAQGDDAFAGQAVVSVAHDADEQARNLIG CCCCCCCHHHHHHHCCCEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHH WRQTYDQLAAGRFVGTLTELPLDTMKLFRESTSHLLRQACEVRGDAYWFGIPLVCDGSAR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEECCCCC VDACRIGPGALAFRPGNVEFELVTPAQFSIYGVVVRGDVLRRYAEEVERRALDERLFTQR CCEEECCCCCEEECCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH VMQVGDARLARLCALLGRRLDGAVAMAGPLPDAQRDDLQAEVLAALFDACAQPADDGSGA HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC APSTRRWIVDQARDYVLAHRTRPVGVPELCEQLHVSRRTLQYCFQDVLGMAPATYLRTLR CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LNGARRDLCGRAAGSVQDVAEAWGFWHLSQFATDYRRLFGKRPSETLRDRA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8300522; 9205837; 9278503 [H]