| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688159
Identifier: 116688159
GI number: 116688159
Start: 147803
End: 148375
Strand: Direct
Name: 116688159
Synonym: Bcen2424_0135
Alternate gene names: NA
Gene position: 147803-148375 (Clockwise)
Preceding gene: 116688158
Following gene: 116688160
Centisome position: 4.24
GC content: 69.63
Gene sequence:
>573_bases ATGCGTGCGACGACGACAACCAGCATGGCAGAACTGCCCCGATCCTTTCCCCGCCACCCGGTCTTCCATCCGGGCGAACT CGACGCGCAACACCGCTTCGGCGTCGCCGACGAAGCCGAGCGGATGAGCGATGCCGTGACGACGCGGCTGAGCCTCGGCG TACGGCAGTTCGTCGAATCGCAACCGTTCATGTTCGTCGGCGCGGCATGCGGCGGCGGTGCCTCGATGACCTGCGACATC GTGCAGAGCCGGCGCGACGCGAACGGCGATCTGCTGCCGGTGGTGCGCGTGATCGATACGAAGACGCTGCGGTTCGCGCT GCCCGCCGCGCATGACGGCGACGGCGGCCGGATCGACGCGGCCGCCTGCGACGGCAGCGGGGTCGGATTGCTGTTCGTCG ATTTCGTGCGCGGCCTGCGCTACCGGATCAACGGTCGCGCCACGCTGCGCACCGATCTGCCGGAAGCGGACGCGGCGCCG TGGGCGGTGGGCAGCGCGATCGTCGAGCTGACGATCGTGCAGGCATACGGCAATTGCGGGACGCGGGTCGTGCGGCTGAA GCAGGCCCGGTAG
Upstream 100 bases:
>100_bases ATTTCCTTATTTCGACAGTCGGCGCCGGTTGCGCTTCGTTGGGCGGCCGGCGCCGGCAACGCTGCCGGCCGTCGCGCATG CGCGGCGGCACGGTGCGCCG
Downstream 100 bases:
>100_bases GCGGTAGCCGGTGACTGCGCCCGGGCGGCGGCGCGCATGCGCGGTCGCCGCGCGGATCGCACCGGCGGCGTGCGCGGCAT GCCGCCTTCGGGTGCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRATTTTSMAELPRSFPRHPVFHPGELDAQHRFGVADEAERMSDAVTTRLSLGVRQFVESQPFMFVGAACGGGASMTCDI VQSRRDANGDLLPVVRVIDTKTLRFALPAAHDGDGGRIDAAACDGSGVGLLFVDFVRGLRYRINGRATLRTDLPEADAAP WAVGSAIVELTIVQAYGNCGTRVVRLKQAR
Sequences:
>Translated_190_residues MRATTTTSMAELPRSFPRHPVFHPGELDAQHRFGVADEAERMSDAVTTRLSLGVRQFVESQPFMFVGAACGGGASMTCDI VQSRRDANGDLLPVVRVIDTKTLRFALPAAHDGDGGRIDAAACDGSGVGLLFVDFVRGLRYRINGRATLRTDLPEADAAP WAVGSAIVELTIVQAYGNCGTRVVRLKQAR >Mature_190_residues MRATTTTSMAELPRSFPRHPVFHPGELDAQHRFGVADEAERMSDAVTTRLSLGVRQFVESQPFMFVGAACGGGASMTCDI VQSRRDANGDLLPVVRVIDTKTLRFALPAAHDGDGGRIDAAACDGSGVGLLFVDFVRGLRYRINGRATLRTDLPEADAAP WAVGSAIVELTIVQAYGNCGTRVVRLKQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20401; Mature: 20401
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRATTTTSMAELPRSFPRHPVFHPGELDAQHRFGVADEAERMSDAVTTRLSLGVRQFVES CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC QPFMFVGAACGGGASMTCDIVQSRRDANGDLLPVVRVIDTKTLRFALPAAHDGDGGRIDA CCCEEEEECCCCCCCEEHHHHHHCCCCCCCEEEHHHHHCCCEEEEECCCCCCCCCCEEEE AACDGSGVGLLFVDFVRGLRYRINGRATLRTDLPEADAAPWAVGSAIVELTIVQAYGNCG EEECCCCCHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCHHHHHHHHHHEEEECCCCCC TRVVRLKQAR CEEEEEECCC >Mature Secondary Structure MRATTTTSMAELPRSFPRHPVFHPGELDAQHRFGVADEAERMSDAVTTRLSLGVRQFVES CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC QPFMFVGAACGGGASMTCDIVQSRRDANGDLLPVVRVIDTKTLRFALPAAHDGDGGRIDA CCCEEEEECCCCCCCEEHHHHHHCCCCCCCEEEHHHHHCCCEEEEECCCCCCCCCCEEEE AACDGSGVGLLFVDFVRGLRYRINGRATLRTDLPEADAAPWAVGSAIVELTIVQAYGNCG EEECCCCCHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCHHHHHHHHHHEEEECCCCCC TRVVRLKQAR CEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA