Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688157

Identifier: 116688157

GI number: 116688157

Start: 145358

End: 145918

Strand: Reverse

Name: 116688157

Synonym: Bcen2424_0133

Alternate gene names: NA

Gene position: 145918-145358 (Counterclockwise)

Preceding gene: 116688161

Following gene: 116688155

Centisome position: 4.19

GC content: 69.7

Gene sequence:

>561_bases
ATGCGGCCGGTGTTCGGAATTTCCACAGTGCGCGGCGGTGTGCGGCCCGCGGACGCGCGCCGCGCAGCGTGGCATGTCGC
TTGCATTCGGATCACCGATCCACACGCCACGGCGCACGCGCCGACCGACACCATGAACGATCGCGGCCCCCTGACCGACG
ACGCCATCGCGTTCATCCGCGAGCAAGCTTTCTTGATCGTCGCGACCGCCGACGCGGCCGGCAACGCCGACTGTTCGTAC
CGCGGCCGTCAGCCGCGCGCCGACGGCTCGTTCACGCCGCTCGTCGACATCCCGGACCGCTGCACGCTGGTGCTGCCCGA
CTTCGCGGGCAACCACCTGCTCAACACGATCGGCAACCTGCTCGTGAACCCGGCCATCGCGCTGCTGTTCGTCGATTTCG
TGCGGCAGACGACCTGGCTCGTGCAGGGTCGCGCGACGCTCGACGAGGATGCGCAAGGGCGCGCGCATCTGTGGCCGGAC
GCGCTGCGCTATCTGGTGATCGAGGTGAAACGCGCAGAGGCGCGCGCGGATGCGGGACTGCCGCCGCTCGTGCTGGCGTG
A

Upstream 100 bases:

>100_bases
GAGAGCACGTCGAGTGCGGCCGGCGCGCGCTCGCACCGTGCGGTGTTCACGCACGCAACACGGCGGGTGTACCGATTCTG
AACACCGCGATTGCGCAGCG

Downstream 100 bases:

>100_bases
CGCGCGGCGGATGAGGCTTTAACGAGCGGACGAGGTGGGTACGGCCGCTGCATTGACCAAAAGACCGAAGCCCCCGGGGA
ACCGGGAACCAAGAACCGAA

Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRPVFGISTVRGGVRPADARRAAWHVACIRITDPHATAHAPTDTMNDRGPLTDDAIAFIREQAFLIVATADAAGNADCSY
RGRQPRADGSFTPLVDIPDRCTLVLPDFAGNHLLNTIGNLLVNPAIALLFVDFVRQTTWLVQGRATLDEDAQGRAHLWPD
ALRYLVIEVKRAEARADAGLPPLVLA

Sequences:

>Translated_186_residues
MRPVFGISTVRGGVRPADARRAAWHVACIRITDPHATAHAPTDTMNDRGPLTDDAIAFIREQAFLIVATADAAGNADCSY
RGRQPRADGSFTPLVDIPDRCTLVLPDFAGNHLLNTIGNLLVNPAIALLFVDFVRQTTWLVQGRATLDEDAQGRAHLWPD
ALRYLVIEVKRAEARADAGLPPLVLA
>Mature_186_residues
MRPVFGISTVRGGVRPADARRAAWHVACIRITDPHATAHAPTDTMNDRGPLTDDAIAFIREQAFLIVATADAAGNADCSY
RGRQPRADGSFTPLVDIPDRCTLVLPDFAGNHLLNTIGNLLVNPAIALLFVDFVRQTTWLVQGRATLDEDAQGRAHLWPD
ALRYLVIEVKRAEARADAGLPPLVLA

Specific function: Unknown

COG id: COG3576

COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20182; Mature: 20182

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVFGISTVRGGVRPADARRAAWHVACIRITDPHATAHAPTDTMNDRGPLTDDAIAFIR
CCCCCCCHHHCCCCCCCHHHHCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
EQAFLIVATADAAGNADCSYRGRQPRADGSFTPLVDIPDRCTLVLPDFAGNHLLNTIGNL
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHH
LVNPAIALLFVDFVRQTTWLVQGRATLDEDAQGRAHLWPDALRYLVIEVKRAEARADAGL
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PPLVLA
CCEECC
>Mature Secondary Structure
MRPVFGISTVRGGVRPADARRAAWHVACIRITDPHATAHAPTDTMNDRGPLTDDAIAFIR
CCCCCCCHHHCCCCCCCHHHHCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
EQAFLIVATADAAGNADCSYRGRQPRADGSFTPLVDIPDRCTLVLPDFAGNHLLNTIGNL
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHH
LVNPAIALLFVDFVRQTTWLVQGRATLDEDAQGRAHLWPDALRYLVIEVKRAEARADAGL
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PPLVLA
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA